FFCP PHASE1:Hg19::chr12:102455905..102455915,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51019 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24256 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y3C0 | |||
|association_with_transcript=-3bp_to_ENST00000240079_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_5_at_CCDC53_5end | |||
|id=chr12:102455905..102455915,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002363;6.30e-21;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002363,6.96e-21,2;CL:0000008,6.96e-21,2 | |||
|ontology_enrichment_development_v019=CL:0000008;6.30e-21;2!UBERON:0009117;5.90e-17;10!UBERON:0005564;5.90e-17;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;2.70e-40;1!DOID:1357;2.70e-40;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,2.21e-40,1;DOID:1357,2.21e-40,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;2.70e-40;1!UBERON:0001825;2.70e-40;1!UBERON:0003566;6.30e-21;2!UBERON:0001777;6.30e-21;2!UBERON:0000473;6.64e-21;8!UBERON:0003135;1.62e-15;11!UBERON:0003891;3.60e-11;4!UBERON:0000964;3.60e-11;4!UBERON:0010409;3.60e-11;4!UBERON:0000991;1.27e-08;21!UBERON:0003101;2.82e-08;22!UBERON:0000079;2.82e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,2.21e-40,1;UBERON:0001825,2.21e-40,1;UBERON:0000473,6.64e-21,8;UBERON:0003566,6.96e-21,2;UBERON:0001777,6.96e-21,2;UBERON:0003135,1.62e-15,11;UBERON:0003891,3.79e-11,4;UBERON:0000964,3.79e-11,4;UBERON:0010409,3.79e-11,4;UBERON:0004348,3.79e-11,4;UBERON:0005427,3.79e-11,4;UBERON:0000991,1.27e-08,21;UBERON:0009196,1.27e-08,21;UBERON:0009117,1.27e-08,21;UBERON:0005564,1.27e-08,21;UBERON:0004176,2.82e-08,22;UBERON:0003101,2.82e-08,22;UBERON:0000079,2.82e-08,22 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,5.82856885964821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0.554128230968366,0,0,0,0,0,0.213557388818567,0,0,0,0.257640540045629,0,0,0,0.252433774244115,0,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0.381988425558278,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0.962479855263359,0,0,0,0.0711418433484141,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0,0,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0,0,0.32681539055697,0,0,0,0.23056390438806,0.179515288819544,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.300646838828985,0.103688191397247,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0.340776043570843,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,0,0.544017803369474,0,0,0,1.25643277000187,0,0,0,0,0,0,0.138348634936231,0,0.151649117541648,0,0,0.468334905806882,0,0.149254802886874,0.233713309847224,0,0,0,0,0,0,0,0.295710299979268,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0.353378291891762,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0.19998739585493,0,0.172214979660816,0,0,0.139879507719444,0,0.127894371303652,0.107824811396682,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.19024743058172,0,0.548257766857182,0.496211178389294,0.175871244359621,0,0,0,0,0,0,0.115233987555779,0,0.271878931907327,0.0657727735628491,0,0,0.156986185701028,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0.198950775161368,0,0.22589216407792,0.109940516745429,0.301925687133347,0,0,0,0,0,0.196308467114945,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,14.7768461525567,16.3458119395269,0,0,0.213233981900981,0,0,0,0,0.12729431655633,0.202117188958219,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p5@CCDC53 | |||
}} |
Revision as of 15:31, 11 January 2014
Short description: | p5@CCDC53 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CCDC53_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -3bp_to_ENST00000240079_5end |
EntrezGene: | CCDC53 |
HGNC: | 24256 |
UniProt: | Q9Y3C0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 6.96e-21 | 2 |
migratory cranial neural crest cell | 6.96e-21 | 2 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 2.21e-40 | 1 |
paranasal sinus | 2.21e-40 | 1 |
testis | 6.64e-21 | 8 |
head connective tissue | 6.96e-21 | 2 |
substantia propria of cornea | 6.96e-21 | 2 |
male reproductive organ | 1.62e-15 | 11 |
stroma | 3.79e-11 | 4 |
cornea | 3.79e-11 | 4 |
eye surface | 3.79e-11 | 4 |
optic eminence | 3.79e-11 | 4 |
corneal primordium | 3.79e-11 | 4 |
gonad | 1.27e-08 | 21 |
indifferent external genitalia | 1.27e-08 | 21 |
indifferent gonad | 1.27e-08 | 21 |
gonad primordium | 1.27e-08 | 21 |
external genitalia | 2.82e-08 | 22 |
male organism | 2.82e-08 | 22 |
male reproductive system | 2.82e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 2.21e-40 | 1 |
maxillary sinus cancer | 2.21e-40 | 1 |