FFCP PHASE1:Hg19::chr11:69466187..69466212,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=595 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1582 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=52bp_to_S71637_5end | |||
|description=CAGE_peak_9_at_CCND1_5end | |||
|id=chr11:69466187..69466212,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.82e-21!180;CL:0000359!1.91e-10!32;CL:0000057!1.88e-09!75;CL:0000192!6.93e-09!42;CL:0000514!6.93e-09!42;CL:0002321!1.10e-08!248;CL:0000220!1.82e-08!246;CL:0000680!1.94e-07!57;CL:0000056!1.94e-07!57;CL:0000355!1.94e-07!57;CL:0000183!2.41e-07!59;CL:0000548!3.33e-07!679;CL:0000004!3.33e-07!679;CL:0000255!3.33e-07!679;CL:0000012!8.28e-07!682;CL:0000144!9.26e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.70e-17;32!CL:0002539;1.24e-10;10!CL:0000192;5.53e-10;43!CL:0002595;5.11e-09;5!CL:0000148;1.87e-08;10!CL:0002567;3.37e-08;3!CL:0000147;1.16e-07;14!CL:0000515;2.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.55e-17,32;CL:0000192,6.82e-12,43;CL:0000514,6.82e-12,43;CL:0000680,5.82e-11,58;CL:0000056,5.82e-11,58;CL:0000355,5.82e-11,58;CL:0002539,9.13e-11,10;CL:0002595,5.29e-09,5;CL:0000148,9.68e-09,10;CL:0000541,9.68e-09,10;CL:0002567,2.20e-08,3;CL:0000187,2.26e-08,55;CL:0000147,5.15e-08,14;CL:0000393,3.73e-07,61;CL:0000211,3.73e-07,61;CL:0000222,6.05e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;5.53e-10;43 | |||
|ontology_enrichment_disease=DOID:2394!5.61e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:0060084;5.38e-08;3!DOID:127;5.38e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,3.76e-08,3;DOID:127,3.76e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0001637!9.36e-11!42;UBERON:0003509!9.36e-11!42;UBERON:0004572!9.36e-11!42;UBERON:0005256!3.47e-09!143;UBERON:0000055!4.49e-09!69;UBERON:0003102!5.51e-09!95;UBERON:0002100!6.57e-09!216;UBERON:0004573!2.82e-08!33;UBERON:0004571!2.82e-08!33;UBERON:0003914!3.25e-08!118;UBERON:0002049!3.35e-08!79;UBERON:0007798!3.35e-08!79;UBERON:0001981!1.03e-07!60;UBERON:0007500!1.03e-07!60;UBERON:0004537!1.03e-07!60;UBERON:0006965!1.03e-07!60;UBERON:0000486!2.13e-07!82;UBERON:0006554!3.96e-07!44;UBERON:0000475!4.57e-07!365;UBERON:0000468!6.99e-07!659;UBERON:0004872!7.26e-07!84;UBERON:0001008!9.97e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.94e-17;33!UBERON:0004571;3.94e-17;33!UBERON:0001637;2.48e-13;42!UBERON:0003509;2.48e-13;42!UBERON:0004572;2.48e-13;42!UBERON:0000947;6.38e-11;21!UBERON:0010191;6.38e-11;21!UBERON:0004237;1.24e-10;10!UBERON:0004695;1.24e-10;10!UBERON:0002111;1.24e-10;10!UBERON:0004178;1.24e-10;10!UBERON:0007500;1.96e-09;56!UBERON:0001981;1.96e-09;56!UBERON:0004537;1.96e-09;56!UBERON:0003513;3.04e-09;7!UBERON:0003834;5.11e-09;5!UBERON:0001533;5.11e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.80e-19,42;UBERON:0003509,1.80e-19,42;UBERON:0004572,1.80e-19,42;UBERON:0004573,3.47e-19,33;UBERON:0004571,3.47e-19,33;UBERON:0007500,3.56e-15,59;UBERON:0001981,3.56e-15,59;UBERON:0004537,3.56e-15,59;UBERON:0006965,3.56e-15,59;UBERON:0000055,1.28e-13,68;UBERON:0004872,2.22e-12,83;UBERON:0000947,4.01e-11,21;UBERON:0010191,4.01e-11,21;UBERON:0002049,4.56e-11,78;UBERON:0007798,4.56e-11,78;UBERON:0004237,9.13e-11,10;UBERON:0004695,9.13e-11,10;UBERON:0002111,9.13e-11,10;UBERON:0004178,9.13e-11,10;UBERON:0002329,2.47e-10,71;UBERON:0003059,2.47e-10,71;UBERON:0007282,2.47e-10,71;UBERON:0004290,2.47e-10,71;UBERON:0009618,2.47e-10,71;UBERON:0003077,4.11e-10,72;UBERON:0007285,4.11e-10,72;UBERON:0005256,4.93e-10,122;UBERON:0001134,6.26e-10,62;UBERON:0002036,6.26e-10,62;UBERON:0003082,6.26e-10,62;UBERON:0007524,6.73e-10,73;UBERON:0002385,1.83e-09,64;UBERON:0001015,1.83e-09,64;UBERON:0000383,1.83e-09,64;UBERON:0003513,3.01e-09,7;UBERON:0003914,4.46e-09,117;UBERON:0000486,5.14e-09,83;UBERON:0003834,5.29e-09,5;UBERON:0001533,5.29e-09,5;UBERON:0007503,6.49e-09,78;UBERON:0002100,3.69e-08,199;UBERON:0003104,7.70e-08,160;UBERON:0009142,7.70e-08,160;UBERON:0004535,8.88e-08,109;UBERON:0000490,1.02e-07,148;UBERON:0001009,2.09e-07,112;UBERON:0000926,7.70e-07,315;UBERON:0004120,7.70e-07,315;UBERON:0006603,7.70e-07,315;UBERON:0001135,8.35e-07,15 | |||
|phase1_expression=1.63510541343501,0.642301571672949,0.704772020479856,1.0007329835313,0,0,2.53299878168311,6.94891860769514,0,0.737201809504527,0,0.218441372130172,0.527533956456907,0.247532705920093,0.994192127183747,0.672325146451775,1.20538905604795,1.46062018077475,1.46379839637152,0,0.204000691244253,0,0,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.434539556882471,0.795285947051099,1.45990461090791,0.189069634328136,0.443458794925128,0.175669571386252,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0.838998872419812,0.275118041940067,0.417989933073621,0.516833518338658,0.35576626268671,0,2.81980521976403,0,0,1.10298924103761,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,1.64619665163954,1.58891016975863,0.573673241497627,1.41867352879343,0.560677600142307,0,0.74000264525148,0,0.269421344139376,0.326923806226917,0.151357427644931,0,0,4.05808099879417,0,2.54062756938062,0.23486899728753,0.161872944368132,0,0.204154171254893,0.491337269247072,0,1.18800285728205,1.48360157567134,0.910161361938026,0.718618141816238,0.336672227908132,0,0.831192346452549,0,0,0.751190294532984,0.113432183160021,0.358779271377724,0.427114777637135,0.211931901159562,0.600182192168805,0.515262646192195,0.257640540045629,0.744467425326359,0.337552664482532,0.584622030967192,0.504867548488229,0.368199594569197,0.646584227275248,0.710019185033229,0.403008392910561,0.67824236924195,0.193260853163297,0.272746120590835,0.573609190778008,0.487894824518382,0.132529768321485,0.580969714347592,0.10366105501537,0.252320850875628,0,0,0,0,0.928735856063958,1.44375896333917,0.236613600079688,0.337169380156203,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0.245976877086227,0,1.20725313949488,0,0,0.555530670951178,0,0,0,0.34779121492523,0.352226082707465,1.29929802984966,0.462985512576611,0.761016608938393,0,0.858486162094873,0,0.468008530278475,0.148631162288728,0,0.839910640994298,0.567100388969546,0.0895585227028483,0.290633938513962,0,0,0,0.207328115540772,0.288239906833923,0.50496973370552,0.761974731506028,4.58386110669933,2.34434894420094,1.71072446022705,1.7480673759565,2.70308752059526,3.71574362419752,0.672786506072164,0,0.2933531432838,0.258543431515556,0,0,1.32969058292435,1.04007436911366,0,0,0.266422179016099,0.285955987316295,1.08524321078289,0,0,0.355391948742546,0,0.301439377059586,0,0.199945982364114,0,0,2.10833939483032,0.479249710983165,0,0,1.01346914667305,1.02738161275192,1.07436577943937,0,0,0,0,0.508189248444927,0,0,0,0.637938751653163,0,0,0,0,0,0.271265023699736,0.207970861530807,0.713715955188647,0.157702415033935,0.117141414992713,1.50473049863859,6.82222512167955,0,0.664225598535437,0.184369168541703,1.82455590382974,0.391602314925481,0.343143423810856,0,0,0,0.303127571446259,0,0.30239029332968,1.73675465473144,0.306923946576125,0.561320188866147,0.768834895534206,2.04682899626681,1.12597744800525,0,0,1.06537035187876,1.14978018419333,2.07701771673448,0.348631135379878,1.57117284469109,2.00506470303285,0.552485933615378,0.459257792658427,1.63882051206045,1.04899531967539,1.80479845162965,0.847168708148562,0.784349769176855,0,0.633309773357254,0,0.340187410553031,0.431831832204279,0,0.812839312631559,0.501689773854853,0.254876273045038,0.831076008928724,0.447749509444357,0,0,0,0.984043937099117,1.95227036798582,0.618246069886334,0,0,0,0,3.21367859688319,0.870036464629098,0,0,0.137836572484531,0,0,0.596586391912706,0.178064071293475,0,0.192190067365106,0,0,6.04299214086472,2.83331112147576,0,0.924100740528266,1.06461206063404,1.73986598415015,2.40921484835096,0.715624433709956,0,0.316379424718726,0.190630193923825,0.511795582622668,0,0,0,0.359744915166629,0,0,1.01091240786658,4.75530963519025,0.842516912477962,0,3.1682753652067,3.16950440270266,0.409499734223957,0.707027159768564,1.13008116620243,0,7.96126770289464,3.94605796728386,0,0.655894752046633,1.21746226177622,0.30982349809975,1.40847801266121,0.430234056612155,0.196498082026242,0.35667105148125,0,0.844430541190656,0.658589785919804,0,0,0,0,0,0.376575203107117,1.72202149068492,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0.213648142254946,0.962479855263359,0,0.929015875628594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0.23874448473769,0,0,0,0,0.667852230137435,0,0.63337622438398,0.19924798825107,0,0,0.409074730008619,0.123084805461069,2.79935628895627,0.449341755736634,0.537063524026827,0,0.295930216910801,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0,0,0,0,0.583209226766509,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0.23056390438806,0.359030577639089,0,0,0.824378340616761,0.533034776018635,0,0,0,0,0,0,0,0,0.421996129056054,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0.150323419414493,0.207376382794494,0,0,0,0,0,0.4160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| |||
|short_description=p9@CCND1 | |||
}} |
Revision as of 09:07, 11 January 2014
Short description: | p9@CCND1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CCND1_5end |
Coexpression cluster: | NA |
Association with transcript: | 52bp_to_S71637_5end |
EntrezGene: | CCND1 |
HGNC: | 1582 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.55e-17 | 32 |
smooth muscle cell | 6.82e-12 | 43 |
smooth muscle myoblast | 6.82e-12 | 43 |
muscle precursor cell | 5.82e-11 | 58 |
myoblast | 5.82e-11 | 58 |
multi-potent skeletal muscle stem cell | 5.82e-11 | 58 |
aortic smooth muscle cell | 9.13e-11 | 10 |
smooth muscle cell of the subclavian artery | 5.29e-09 | 5 |
melanocyte | 9.68e-09 | 10 |
melanoblast | 9.68e-09 | 10 |
light melanocyte | 2.20e-08 | 3 |
muscle cell | 2.26e-08 | 55 |
pigment cell | 5.15e-08 | 14 |
electrically responsive cell | 3.73e-07 | 61 |
electrically active cell | 3.73e-07 | 61 |
mesodermal cell | 6.05e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 3.76e-08 | 3 |
leiomyoma | 3.76e-08 | 3 |