FFCP PHASE1:Hg19::chr11:57335750..57335798,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9246 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12490 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000340573_5end | |||
|coexpression_cluster_id=C214 | |||
|description=CAGE_peak_2_at_UBE2L6_5end | |||
|id=chr11:57335750..57335798,- | |||
|ontology_enrichment_celltype=CL:0002057!1.21e-08!42;CL:0000860!6.22e-07!45 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.95e-09,42;CL:0002057,4.95e-09,42;CL:0000738,1.26e-08,136;CL:0002087,1.97e-08,115;CL:0000988,3.16e-08,177;CL:0000037,4.19e-08,168;CL:0002031,8.16e-08,120;CL:0000473,1.87e-07,48;CL:0000234,1.87e-07,48;CL:0002032,8.03e-07,161;CL:0000837,8.03e-07,161 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.49e-22!82;UBERON:0005743!3.67e-20!86;UBERON:0000073!2.29e-19!94;UBERON:0001016!2.29e-19!94;UBERON:0000955!1.01e-16!69;UBERON:0006238!1.01e-16!69;UBERON:0001049!1.03e-15!57;UBERON:0005068!1.03e-15!57;UBERON:0006241!1.03e-15!57;UBERON:0007135!1.03e-15!57;UBERON:0002616!5.97e-15!59;UBERON:0001893!3.44e-14!34;UBERON:0002020!5.83e-14!34;UBERON:0003528!5.83e-14!34;UBERON:0001869!6.58e-14!32;UBERON:0002791!1.33e-13!33;UBERON:0002780!1.70e-12!41;UBERON:0001890!1.70e-12!41;UBERON:0006240!1.70e-12!41;UBERON:0000956!2.09e-12!25;UBERON:0000203!2.09e-12!25;UBERON:0002619!7.75e-12!22;UBERON:0003080!1.36e-11!42;UBERON:0003075!1.76e-11!86;UBERON:0007284!1.76e-11!86;UBERON:0001950!2.70e-11!20;UBERON:0002346!2.08e-10!90;UBERON:0007023!2.15e-09!115;UBERON:0000153!5.63e-08!129;UBERON:0007811!5.63e-08!129;UBERON:0003056!2.00e-07!61;UBERON:0000033!2.60e-07!123;UBERON:0004121!6.53e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.50e-15;32!UBERON:0001893;3.06e-15;34!UBERON:0003528;6.67e-15;34!UBERON:0002020;6.67e-15;34!UBERON:0002791;9.34e-15;32!UBERON:0000956;1.29e-14;25!UBERON:0000203;1.29e-14;25!UBERON:0002619;3.59e-14;22!UBERON:0001950;1.29e-13;20!UBERON:0000073;3.02e-11;53!UBERON:0002616;3.02e-11;53!UBERON:0002780;3.31e-11;41!UBERON:0001890;3.31e-11;41!UBERON:0001017;7.86e-11;75!UBERON:0000955;1.15e-09;68!UBERON:0001016;3.72e-09;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.22e-25,81;UBERON:0001016,2.05e-24,89;UBERON:0000955,9.65e-20,68;UBERON:0006238,9.65e-20,68;UBERON:0001049,1.47e-18,56;UBERON:0005068,1.47e-18,56;UBERON:0006241,1.47e-18,56;UBERON:0007135,1.47e-18,56;UBERON:0000073,2.91e-18,53;UBERON:0002616,2.91e-18,53;UBERON:0001893,1.20e-17,34;UBERON:0003528,2.30e-17,34;UBERON:0002020,2.30e-17,34;UBERON:0001869,2.52e-17,32;UBERON:0002791,1.82e-16,32;UBERON:0000956,4.46e-15,25;UBERON:0000203,4.46e-15,25;UBERON:0002780,6.33e-15,41;UBERON:0001890,6.33e-15,41;UBERON:0003080,6.33e-15,41;UBERON:0006240,6.33e-15,41;UBERON:0002619,2.07e-14,22;UBERON:0001950,9.07e-14,20;UBERON:0003075,2.97e-11,82;UBERON:0007284,2.97e-11,82;UBERON:0002346,3.16e-10,86;UBERON:0003056,2.42e-09,61;UBERON:0007023,1.07e-08,114;UBERON:0004121,4.22e-08,171;UBERON:0000924,4.22e-08,171;UBERON:0006601,4.22e-08,171 | |||
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| |||
|short_description=p2@UBE2L6 | |||
}} |
Revision as of 07:45, 11 January 2014
Short description: | p2@UBE2L6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_UBE2L6_5end |
Coexpression cluster: | C214_Neurons_Neural_duodenum_temporal_occipital_parietal_brain |
Association with transcript: | 0bp_to_ENST00000340573_5end |
EntrezGene: | UBE2L6 |
HGNC: | 12490 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.95e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.95e-09 | 42 |
leukocyte | 1.26e-08 | 136 |
nongranular leukocyte | 1.97e-08 | 115 |
hematopoietic cell | 3.16e-08 | 177 |
hematopoietic stem cell | 4.19e-08 | 168 |
hematopoietic lineage restricted progenitor cell | 8.16e-08 | 120 |
defensive cell | 1.87e-07 | 48 |
phagocyte | 1.87e-07 | 48 |
hematopoietic oligopotent progenitor cell | 8.03e-07 | 161 |
hematopoietic multipotent progenitor cell | 8.03e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.22e-25 | 81 |
nervous system | 2.05e-24 | 89 |
brain | 9.65e-20 | 68 |
future brain | 9.65e-20 | 68 |
neural tube | 1.47e-18 | 56 |
neural rod | 1.47e-18 | 56 |
future spinal cord | 1.47e-18 | 56 |
neural keel | 1.47e-18 | 56 |
regional part of nervous system | 2.91e-18 | 53 |
regional part of brain | 2.91e-18 | 53 |
telencephalon | 1.20e-17 | 34 |
brain grey matter | 2.30e-17 | 34 |
gray matter | 2.30e-17 | 34 |
cerebral hemisphere | 2.52e-17 | 32 |
regional part of telencephalon | 1.82e-16 | 32 |
cerebral cortex | 4.46e-15 | 25 |
pallium | 4.46e-15 | 25 |
regional part of forebrain | 6.33e-15 | 41 |
forebrain | 6.33e-15 | 41 |
anterior neural tube | 6.33e-15 | 41 |
future forebrain | 6.33e-15 | 41 |
regional part of cerebral cortex | 2.07e-14 | 22 |
neocortex | 9.07e-14 | 20 |
neural plate | 2.97e-11 | 82 |
presumptive neural plate | 2.97e-11 | 82 |
neurectoderm | 3.16e-10 | 86 |
pre-chordal neural plate | 2.42e-09 | 61 |
adult organism | 1.07e-08 | 114 |
ectoderm-derived structure | 4.22e-08 | 171 |
ectoderm | 4.22e-08 | 171 |
presumptive ectoderm | 4.22e-08 | 171 |