FFCP PHASE1:Hg19::chr11:57282327..57282342,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8501 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9225 | |||
|TSSclassifier=strong | |||
|UniProt=E9PR87 | |||
|association_with_transcript=-3bp_to_ENST00000530159_5end | |||
|coexpression_cluster_id=C27 | |||
|description=CAGE_peak_2_at_SLC43A1_5end | |||
|id=chr11:57282327..57282342,- | |||
|ontology_enrichment_celltype=CL:0000542!9.22e-09!53;CL:0000051!9.22e-09!53;CL:0000838!1.08e-08!52;CL:0000791!5.09e-07!18;CL:0000789!5.09e-07!18;CL:0002420!5.09e-07!18;CL:0002419!5.09e-07!18;CL:0000790!5.09e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.64e-08;12!CL:0000791;6.71e-08;18!CL:0000789;6.71e-08;18!CL:0002419;6.71e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,9.26e-09,52;CL:0000542,2.04e-08,53;CL:0000051,2.04e-08,53;CL:0000791,2.61e-08,18;CL:0000789,2.61e-08,18;CL:0002420,2.61e-08,18;CL:0002419,2.61e-08,18;CL:0000790,2.61e-08,18;CL:0000182,6.04e-08,12 | |||
|ontology_enrichment_development_v019=CL:0000790;6.71e-08;18!UBERON:0004161;1.91e-07;11!UBERON:0009497;5.98e-07;13 | |||
|ontology_enrichment_disease=DOID:8692!3.76e-08!31;DOID:1240!8.31e-08!39;DOID:2531!1.74e-07!51;DOID:0060083!1.74e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.69e-09;31!DOID:1240;5.80e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,4.45e-10,31;DOID:2531,2.15e-09,51;DOID:0060083,2.15e-09,51;DOID:1240,1.29e-08,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.35e-08;19!UBERON:0006925;1.35e-08;19!UBERON:0002423;2.19e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.62e-08,19;UBERON:0006925,3.62e-08,19;UBERON:0008836,3.62e-08,19;UBERON:0009854,9.43e-08,23;UBERON:0008835,2.26e-07,22;UBERON:0003894,2.26e-07,22;UBERON:0009497,4.24e-07,25;UBERON:0000015,4.24e-07,25;UBERON:0002423,4.24e-07,25;UBERON:0006235,4.24e-07,25;UBERON:0004161,4.24e-07,25;UBERON:0003929,4.49e-07,54;UBERON:0009856,5.06e-07,26;UBERON:0004921,9.89e-07,118 | |||
|phase1_expression=0.908391896352783,0,1.12763523276777,1.0007329835313,0.446961094427288,0,2.53299878168311,0,0.522371256399677,1.22866968250754,3.48900583986214,0,0.263766978228454,0.123766352960047,0,0.672325146451775,0.602694528023977,0.730310090387373,0.487932798790507,0,0.612002073732759,0,0,0,0.376627918784408,1.60468152070698,1.31360943119913,0.708397031823113,0.393364276848904,0.383829398097213,0.154816123316076,0,0.30120591877825,1.47901604066715,6.97204805222715,4.54941543959749,1.46800219667424,0,0.200544447470142,0.434021741431704,0,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0,1.75996244461323,0.546138611262131,0,0.426730222566507,0.800791974072025,0.574752439954483,0.661044872784862,1.90810750907073,0.569212969109448,0,1.14681968437569,0,0,1.84368859342554,0.786839080455332,1.57204305099666,1.23360899399706,3.51091640320424,3.58514493296949,4.2610302516126,3.89653456815823,1.33692548262208,2.65145316727353,1.77227115666897,0.541607727530031,2.30564375506215,1.8208308658383,1.80881695064044,3.03985019564433,0.289803085735052,1.4828656316206,1.07016331235885,1.04535523804977,1.92625882585863,1.53288197440768,2.40539211837841,0.759059076058509,1.59282707162048,4.55758417699493,1.90090408889675,1.05402583354441,1.4078527226986,1.24930726552346,1.4206635122641,1.64225599384209,1.41124720257313,0.534880391567015,2.31719046212478,0,0,0.895037932904712,0.361439152384566,0,0.144846518960824,0,0,0.189069634328136,0.443458794925128,0.43917392846563,0.327447688744282,3.64295288292542,1.48313777113772,0,0,0,0.476981248610684,0,0.371457501329565,2.58391129576717,0.860234595106124,2.08284300964557,0.56530794192401,2.09749718104953,1.6507082516404,1.04497483268405,0.258416759169329,0,0.33472061276467,0,0,0.488124115096339,0.735326160691737,0,0.892997282840798,0.673588117878509,1.57656072676651,1.53316637465883,2.84779697870439,0.366403487860815,0,0,0.436094052142534,0,0.506522046658319,0,1.14734648299525,1.06400514659507,0,1.06748995729705,0.74000264525148,1.24484414159907,0.942974704487816,0.653847612453835,0.151357427644931,0.576175924479999,1.64025002283658,1.5608003841516,0,1.34503812496621,0.587172493218824,0.485618833104395,0.421352420106746,1.02077085627447,0.491337269247072,0.619954687054593,0,0.494533858557114,0,1.43723628363248,0.673344455816265,0.875829639103749,0.554128230968366,0.877955241761676,0.919463387397059,1.35214253015937,0.567160915800105,0.538168907066586,0.213557388818567,0.211931901159562,0.900273288253207,0.824420233907511,0,0.558350568994769,0,0.0974370051611986,0.504867548488229,0.368199594569197,0.969876340912871,0,0,0.508681776931463,0,0,0,1.34171076742555,2.12047629314376,1.2781333715647,0.829288440122964,1.00928340350251,0,3.12899064659632,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0.738155454624648,4.20725321410337,2.057870056657,0,25.3510069643662,4.91413608338813,14.1789577603537,0,5.78045661152634,0.343135620597051,0,3.37205259772859,0.502644862058154,1.01847289674383,2.28065813717227,3.11980435583874,0,0,0.352226082707465,0.721832238805369,0.925971025153221,0,0,0,0.492434012174795,2.34004265139238,0,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0.829312462163088,0.576479813667846,0.50496973370552,1.07946420296687,2.29193055334967,0,3.4214489204541,2.77634230298973,1.50171528921959,0,0.448524337381443,1.30788020649984,0.2933531432838,0.646358578788889,0,2.535908257668,0.531876233169741,0,1.28603687131071,0,2.1313774321288,1.00084595560703,2.17048642156577,1.64648067356154,1.30294473717494,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.289562613335158,1.02738161275192,0.358121926479791,14.234813287178,2.56139988262505,1.72502059887614,1.41177339907723,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0.500170521059677,0.271265023699736,0,0.356857977594324,0,0,0.902838299183157,0,1.03473071292505,1.32845119707087,0.368738337083406,0.434418072340414,1.17480694477644,2.05886054286514,0.82707210449155,0.647142602455851,1.06727557803444,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0.321707842287215,1.48418066444991,0.462629081407967,0.710246901252508,0.164254312027618,0.519254429183621,0.232420756919918,4.83437798366489,0,0.368323955743585,1.26295892981067,0.910455840033585,0.655622074797121,0.902399225814824,0.0770153371044148,1.56869953835371,1.46139224653261,0.422206515571503,3.4120015221269,0.340187410553031,0.431831832204279,4.62681758070868,1.35473218771926,0.501689773854853,1.52925763827023,0.831076008928724,1.11937377361089,11.8400333388805,12.8103371002201,0.512900250232778,0.328014645699706,0,6.69766575710195,0.27470839445503,0.495056999523528,1.14853107599234,1.30012049207304,0,0.193341436584244,1.84858340537573,1.22802939780904,2.06754858726796,0.859361958946189,1.45016693914229,1.53407929348982,0.356128142586949,0,0.576570202095319,0.127612712494584,0.50578890427775,0.464845549297286,0,0.6970372701606,0.308033580176089,1.59691809095107,0,0,0.143124886741991,0.744316738719335,0.632758849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| |||
|short_description=p2@SLC43A1 | |||
}} |
Revision as of 07:45, 11 January 2014
Short description: | p2@SLC43A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC43A1_5end |
Coexpression cluster: | C27_pancreas_temporal_duodenum_salivary_ductus_umbilical_lung |
Association with transcript: | -3bp_to_ENST00000530159_5end |
EntrezGene: | SLC43A1 |
HGNC: | 9225 |
UniProt: | E9PR87 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 9.26e-09 | 52 |
lymphocyte | 2.04e-08 | 53 |
common lymphoid progenitor | 2.04e-08 | 53 |
mature alpha-beta T cell | 2.61e-08 | 18 |
alpha-beta T cell | 2.61e-08 | 18 |
immature T cell | 2.61e-08 | 18 |
mature T cell | 2.61e-08 | 18 |
immature alpha-beta T cell | 2.61e-08 | 18 |
hepatocyte | 6.04e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 3.62e-08 | 19 |
digestive gland | 3.62e-08 | 19 |
liver bud | 3.62e-08 | 19 |
digestive tract diverticulum | 9.43e-08 | 23 |
hepatic diverticulum | 2.26e-07 | 22 |
liver primordium | 2.26e-07 | 22 |
epithelium of foregut-midgut junction | 4.24e-07 | 25 |
anatomical boundary | 4.24e-07 | 25 |
hepatobiliary system | 4.24e-07 | 25 |
foregut-midgut junction | 4.24e-07 | 25 |
septum transversum | 4.24e-07 | 25 |
gut epithelium | 4.49e-07 | 54 |
sac | 5.06e-07 | 26 |
subdivision of digestive tract | 9.89e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 4.45e-10 | 31 |
hematologic cancer | 2.15e-09 | 51 |
immune system cancer | 2.15e-09 | 51 |
leukemia | 1.29e-08 | 39 |