FFCP PHASE1:Hg19::chr11:5711010..5711105,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10346 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16379 | |||
|TSSclassifier=strong | |||
|UniProt=F5GZK6 | |||
|association_with_transcript=0bp_to_ENST00000460454,ENST00000545338_5end | |||
|coexpression_cluster_id=C413 | |||
|description=CAGE_peak_1_at_TRIM22_5end | |||
|id=chr11:5711010..5711105,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.15e-34!140;CL:0002087!1.40e-33!119;CL:0002031!1.14e-28!124;CL:0000037!6.51e-25!172;CL:0000566!6.51e-25!172;CL:0002057!7.40e-24!42;CL:0000988!3.65e-23!182;CL:0002032!6.72e-23!165;CL:0000837!6.72e-23!165;CL:0000860!1.37e-19!45;CL:0000766!1.14e-18!76;CL:0002194!2.91e-17!63;CL:0000576!2.91e-17!63;CL:0000040!2.91e-17!63;CL:0000559!2.91e-17!63;CL:0002009!1.19e-16!65;CL:0000048!3.58e-16!430;CL:0000557!1.48e-15!71;CL:0000034!1.57e-15!444;CL:0000723!2.88e-15!436;CL:0000838!6.93e-15!52;CL:0000542!1.00e-14!53;CL:0000051!1.00e-14!53;CL:0000839!2.19e-14!70;CL:0000134!2.50e-14!358;CL:0002320!4.64e-13!365;CL:0000219!9.03e-10!390;CL:0000763!9.53e-10!112;CL:0000049!9.53e-10!112;CL:0000945!1.86e-09!24;CL:0000826!1.86e-09!24;CL:0000791!1.34e-08!18;CL:0000789!1.34e-08!18;CL:0002420!1.34e-08!18;CL:0002419!1.34e-08!18;CL:0000790!1.34e-08!18;CL:0000236!6.34e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.59e-17;33!CL:0002057;1.59e-17;33!CL:0000473;1.63e-14;39!CL:0000234;1.63e-14;39!CL:0000576;4.64e-14;48!CL:0002087;7.35e-12;104!CL:0000766;2.13e-10;69!CL:0000945;1.76e-09;24!CL:0000542;3.23e-09;53!CL:0000791;1.29e-08;18!CL:0000789;1.29e-08;18!CL:0002419;1.29e-08;18!CL:0000738;3.35e-08;136!CL:0000236;1.23e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.39e-37,136;CL:0002087,4.61e-37,115;CL:0002031,1.15e-31,120;CL:0000037,3.34e-27,168;CL:0000988,9.54e-26,177;CL:0002032,4.03e-25,161;CL:0000837,4.03e-25,161;CL:0000860,6.36e-24,42;CL:0002057,6.36e-24,42;CL:0000473,1.60e-23,48;CL:0000234,1.60e-23,48;CL:0000766,6.42e-22,72;CL:0002194,9.25e-21,59;CL:0000576,9.25e-21,59;CL:0000040,9.25e-21,59;CL:0000559,9.25e-21,59;CL:0002009,5.42e-20,61;CL:0000557,1.47e-18,67;CL:0000839,3.31e-17,66;CL:0000048,4.17e-17,427;CL:0000034,1.71e-16,441;CL:0000723,3.18e-16,433;CL:0000134,2.42e-15,354;CL:0000838,7.91e-15,52;CL:0000542,1.14e-14,53;CL:0000051,1.14e-14,53;CL:0002320,5.18e-14,361;CL:0000763,2.11e-11,108;CL:0000049,2.11e-11,108;CL:0000219,1.30e-10,386;CL:0000945,1.77e-09,24;CL:0000826,1.77e-09,24;CL:0000791,1.28e-08,18;CL:0000789,1.28e-08,18;CL:0002420,1.28e-08,18;CL:0002419,1.28e-08,18;CL:0000790,1.28e-08,18;CL:0000236,6.07e-08,14 | |||
|ontology_enrichment_development_v019=CL:0002057;3.08e-17;42!CL:0000051;3.23e-09;53!CL:0000790;1.29e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.58e-24!112;UBERON:0002390!6.55e-23!102;UBERON:0003061!6.55e-23!102;UBERON:0002371!6.22e-15!80;UBERON:0002384!4.19e-12!375;UBERON:0003081!3.23e-11!216;UBERON:0001474!4.89e-11!86;UBERON:0002405!1.48e-10!115;UBERON:0004765!3.60e-10!101;UBERON:0001434!3.60e-10!101;UBERON:0002204!1.88e-09!167;UBERON:0000178!7.43e-08!15;UBERON:0000179!7.43e-08!15;UBERON:0000463!7.43e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.02e-08;15!UBERON:0000179;7.02e-08;15!UBERON:0000463;7.02e-08;15!UBERON:0002390;3.09e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.57e-27,108;UBERON:0002390,7.09e-26,98;UBERON:0003061,7.09e-26,98;UBERON:0002405,1.50e-20,93;UBERON:0002371,1.56e-17,76;UBERON:0003081,5.71e-15,203;UBERON:0001474,3.33e-13,82;UBERON:0002384,5.83e-13,371;UBERON:0004765,2.98e-12,90;UBERON:0001434,3.07e-11,100;UBERON:0002204,4.09e-10,167;UBERON:0000926,1.16e-09,315;UBERON:0004120,1.16e-09,315;UBERON:0006603,1.16e-09,315;UBERON:0000178,7.11e-08,15;UBERON:0000179,7.11e-08,15;UBERON:0000463,7.11e-08,15 | |||
|phase1_expression=40.6959569566047,22.9087560563352,49.8978590499738,23.01685862122,29.0524711377737,34.8935409640147,10.1319951267324,32.8494334181952,37.6107304607768,0.982935746006035,0,0,0,2.59909341216098,3.64537113300707,37.6502082012994,42.7913114897024,50.3913962367288,49.2812126778412,4.92484232307152,3.26401105990805,2.5076377718247,81.0047843580891,39.009211145772,38.7926756347941,124.706678180656,106.07396156933,99.9626922683726,48.3838060524152,87.8969321642617,54.3404592839427,3.67768489791571,2.71085326900425,2.21852406100073,42.6844275197462,11.9422155289434,51.6736773229331,102.489150578397,75.4047122487733,91.5785874420895,58.4419387766203,51.8229865630367,37.0908817393229,75.6070841653736,69.1512976950521,77.3843155189134,75.7718660312532,74.8325556199723,91.6730857849507,543.450929096542,408.576326913916,717.01412102219,125.832173468866,112.95981962717,144.906340655946,84.8972951337147,84.6009065179322,112.361742222542,232.011590417144,166.241236025416,175.817709594736,509.620258788476,465.149249573645,554.518400443035,330.838532036586,141.846306172785,214.250853654478,358.280596656116,318.626063154743,556.003442445099,454.65502647766,259.635733371233,470.579570124595,201.326287855281,189.005222668924,180.096776491695,163.101172424711,191.926069051445,136.134571932427,142.506371870624,201.10476064828,177.184229151695,212.9554557982,237.570295899027,247.283572574068,193.735521045194,225.422940701275,212.083650343204,246.569737548754,198.443180943356,134.33426070983,136.826265123429,120.033793631322,33.0428321447565,104.254592714566,46.3555989204136,114.681795976365,77.8161310243346,66.8204871748405,447.056688674673,170.131423182734,160.972253949809,118.844304328826,121.771629375495,230.676425552798,263.403800659926,261.596532397005,166.518715643378,163.484599882767,166.575597363524,153.650609888932,236.189514874068,171.122693889018,210.554631706604,139.032246660619,145.375886680977,178.197529524893,189.682349906412,176.354725337593,143.991567274492,127.612356955858,149.220970978395,133.710705741062,139.63339276947,157.412715455956,148.459337031599,123.169199538157,101.206585098816,75.4181352109491,74.0052703841103,26.8187552945358,9.38981203585091,7.92747883429888,35.4210369336875,24.0642197105227,11.0083354410226,6.36228757640879,10.2193322763554,24.7681220969858,19.0687281817805,11.5941917114926,24.6895557313188,2.91436230634034,4.82019775619758,20.7710331938997,20.8955684759121,34.5690697349049,205.81740877551,348.344900665098,194.643730696692,15.9009925893364,10.3228151412735,9.71993404501264,12.4367747223282,14.2629808311368,16.507082516404,17.3465822225553,29.2010937861342,52.2976406149464,27.1123696339383,39.8801023938056,28.8903400173035,21.4774610642389,21.3244586600604,8.91156142669936,28.6652127791896,18.6359379279721,18.8061172407148,6.13266549863533,15.1882505530901,10.6257011479636,79.068250461638,166.74551358378,2.18047026071267,24.3516256330706,28.7451261478596,96.5262928128365,48.7622255272983,14.5414036701326,10.6528744027038,7.47242970107935,8.14002909776628,14.626918663789,17.2429660249201,8.00963325255948,7.7192288098915,10.37116664064,0.234321431833797,14.0472034573644,8.55707732316674,12.5536891663513,1.52664848236894,0.809364721840658,0.280901613404497,20.8237254679991,1.84251475967652,16.5321249881225,106.920257155385,31.6501669476553,4.55080680969013,2.15585442544872,2.35670559535693,0.375355559615893,15.2385263516301,17.5591048352335,26.0514626429167,27.193088662094,17.3551240234832,35.8779271377724,44.419936874262,25.8556919414665,40.8123890674787,40.6026965199449,67.2441809519092,43.7374612379236,38.3122274187674,16.3694168670814,39.632102556326,46.0249493211497,97.3109262049248,39.7610743618608,21.560949020715,13.564847384839,26.669997736535,37.3662185209443,22.6575630357313,8.90408054746046,11.5300898439692,4.76395165765025,9.84780022646019,13.3730050964083,19.343800031019,59.4508222853301,48.2430703644664,17.9575397758225,80.8000194775643,110.447560695447,0.591534000199219,0.674338760312407,0.241011029883482,0.330881918197182,0.435758888184812,0,1.21348177344148,1.37355025587742,0,4.42893272774789,2.80483547606892,2.057870056657,0,1.26755034821831,24.5706804169407,3.54473944008842,1.7658523976586,2.09080345523293,19.2155947534349,15.8040410988421,6.74410519545717,8.54496265498862,23.2396997347909,4.88712457965487,4.15973914111831,15.8764476227801,22.60642897014,33.4614778572092,87.1973344476886,76.3926095751408,61.2618370195406,0,0,61.0618175096745,10.0621834009872,25.71319107595,29.9948268757686,89.8704385863899,81.2371307198874,22.7478647665235,22.960081142603,8.43441894163465,64.5388841643686,18.314074274751,2.28060927094849,7.35011762426503,2.39860623510122,0.063497894292169,5.72982638337417,0,3.4214489204541,0.616964956219941,11.4130361980689,24.8668996388603,0.897048674762886,11.3349617896653,1.68678057388185,19.2614856479089,7.15312891703765,10.988935783228,33.2422645731088,22.8816361205005,0.771622122786426,0,0.266422179016099,8.00676764485626,0.542621605391443,3.29296134712308,13.3551835560431,11.727934308504,9.50342247520115,44.6130278048187,33.1182714268112,19.7946522540473,37.703371998769,34.6557393088167,29.5167515276244,9.10574450868014,9.18895486672911,21.3955357561078,33.2997005335432,10.2738161275192,15.9364257283507,5.49217205568284,108.958010391666,69.0008239550455,88.3000089604669,11.4342580900109,3.90419561572865,2.31986643833309,6.03058555203656,6.37938751653163,86.135807753926,50.8574480646842,200.162692989605,3.0672872929785,11.0037514633129,10.5793359242897,28.9079497527822,16.593895958136,18.6088849740043,14.1741112141183,28.2889333744056,22.7407504055985,6.2083842775503,5.31380478828349,4.05612170791747,36.5780016910629,2.74121620447837,1.37257369524342,94.4929879381595,105.268529999485,85.275318684952,0,3.32870879020994,0.604780586659361,29.0286135147969,61.8451752350892,24.9787484045435,37.8010490304318,41.9599944234697,15.2811225086427,16.325987308949,22.6688249889904,25.3913267197772,42.0491038790703,44.1366264806078,30.0984880211294,0.120859449591622,19.0481146788121,4.8802924136025,24.3406630108966,18.3912079686784,33.3056013996937,1.35359883872224,4.38987421495164,0,0,31.454385410077,1.13733384070897,2.55140557914773,6.0456456508599,0,1.35473218771926,2.50844886927427,1.78413391131527,0,0.895499018888713,3.50815802633495,0.261435451024901,10.0015548795392,1.31205858279882,6.83294628795036,22.9781455974421,0,0.165018999841176,19.5250282918699,9.75090369054782,49.8120182516895,17.0140464194135,6.16194468458577,6.60065801322357,2.48105830472155,34.5893188475841,9.71611849225331,4.00565148855674,17.628343058054,15.8673518746539,7.49541262723914,38.2838137483752,8.19378024929954,12.5508298310267,37.1478569260155,15.3348199435332,117.668827627266,12.7753447276085,12.179061889051,20.3856641014312,32.489349290432,40.9374206295634,37.3327721168097,21.3505817194684,1.79128453917934,11.9822916649498,29.9111053050381,10.20433232259,30.3984453315802,21.1393512896762,13.0771766603712,12.7374963391189,11.0957224821106,18.5353720745152,0.975267478179181,260.04229343658,10.5650146756755,36.0359766117082,21.3522202250106,22.6016233240486,8.27048015319186,32.5085097868198,62.2600257060343,9.260408548267,7.87073702455959,16.2328301570163,15.1813514068878,7.60578126837052,25.6706320445252,18.5690687514799,11.7701446988813,14.5452036268945,83.1764083072797,67.5054530567799,0.379473173765715,0,5.00354986172663,4.69211592875051,3.26672954583968,22.8769435887573,3.87454835404107,5.05414427002877,2.66058092122005,33.3098930300091,118.235292951095,109.34312062136,98.5489633811301,127.453999869917,121.763232833513,103.107256479642,135.547890746767,92.0025204501354,0.106824071127473,0,1.47024129588619,18.3945143374462,27.4111504655245,0,0.318852545457645,23.949524571938,25.08720348734,2.32840940996271,0.649243880549111,25.2717460302113,44.9622317695389,1.09675927041116,35.0888267926094,33.0118966713126,40.3076068510286,65.3831051298994,20.4406194091357,21.6408367196132,2.76516687877612,1.3420566473545,2.33588798396672,7.03397143447345,0.278406173895242,3.69262196843137,0.270455678475983,5.99529542396076,2.81974010175699,1.8714054040822,70.9099587675967,0,0.557216921387392,0,3.58116727106535,17.8178808499583,0.614321404198464,14.9122147164945,18.9903712154192,41.0729121534523,17.9636222907168,10.5562704063997,29.6879502494094,64.3741523187574,0,25.2603645780322,89.7288231811197,32.6591567044898,1.88723537409386,1.61119057208048,52.6919541333678,26.9296497388829,95.7932369387759,36.6752067477302,3.87733098438087,14.4718233132488,0,0.260427761085233,0,13.0499923578263,0.1137934482855,0.254253650292766,0,0,0,1.04174996959975,13.2861207872076,17.0040978461825,3.05163472634166,6.96649337566715,5.02430952221031,10.0917282690827,0.762569244632931,6.97118721393016,21.0843708300404,0.569710279235006,1.61394733071642,6.28303510868405,0.108647371922008,18.5020672644513,26.1969117129326,35.1802952172299,15.3289947293605,5.33732871743084,1.66211681900156,0,0,0,0,0,2.3209787098083,1.63232808159148,0.141353071433941,0,10.9478812418636,18.0453431586812,10.9985426088053,96.3693668212021,77.5981536584038,77.8987743310697,21.0965546229519,11.236087062183,11.2446933948163,26.6383992254872,6.26126780582687,0,22.0967265595659,16.9387002468129,1.83643656978294,89.093077276168,4.66002600184927,0,0,0,0,0,4.83836228250648,3.46686682532847,1.38847790668105,13.8169280354272,3.65648667637691,26.7331802410306,13.5868965652577,0,0,0.0821154570532092,31.4244413422479,0,7.00540296419651,19.1858694505451,1.58971689362392,11.2693216801464,32.4615295339773,0.320635281006135,21.772205463414,3.59657297247834,0.576361668616424,0,0,0.288109595976299,1.86378803348149,6.59943296927027,16.3085047288337,18.7239094899076,10.7098128518138,0.866851769704557,13.8096666403252,30.3929941140225,102.197270453578,15.0417904496985,51.2630340844663,49.1537026239167,30.0200155455306,76.8124136297191,4.5926170114768,9.01374701086799,15.6220020209311,7.05426461110626,12.9707958075265,0,0.472699093843342,0.659326867049332,0.539228350833479,0.0984274815147488,10.1607998478941,15.1093641063768,24.5166131000836,14.1462770649217,28.0580450658357,26.1727412958387,12.8235118184355,11.6070293183692,8.14044059217531,0,16.9432270693276,4.19636705079985,1.47840471127169,0.179287339332845,4.2221343410278,28.5878130549347,9.26928758511604,0,30.4079776982079,32.8404166656482,32.0055612907221,2.39460383124975,5.25392132795769,31.8625600738739,8.8383431385698,9.23279072171919,3.97520666736664,19.263160497871,21.4216814823158,0,0,51.8986825078996,39.4582805800162,57.164989637913,127.018501583859,0.395223263795889,23.0188010939893,47.2372530749935,19.5846409213011,15.2920835353847,22.9759182572596,11.1476694441334,0,5.31640907980192,14.6431517882356,17.025966576084,24.083186218983,31.0601344303186,35.8917209001196,0,1.8747061194316,3.63957882099955,0.570930667089935,92.4594671413815,0,0,27.7613933369586,28.5130238013614,34.397963413162,29.1680628123637,50.5651482522676,144.149417898639,41.4200523798432,26.9191044298565,27.6678217037349,18.186183448725,14.4960058118969,46.7795236650149,17.5447141270173,34.420615250791,24.1915960247775,30.2612135850806,20.4350348236217,26.6563648518157,34.9908830556009,23.2766283779276,20.3005952810303,18.0973166352613,27.4686163202045,16.4011383511893,43.9546502633975,30.9809529664646,52.9976572560334,12.1350493156601,23.159691868492,7.56883446699114,9.74835479702771,15.280483305373,76.1131151015114,8.23808668974842,1.23520578864389,12.2799067764076,25.266547870261,0.964570191354574,26.0171358605732,0,11.3992012771296,17.9277374144655,12.9962929982627,11.1070376038451,7.17470137692161,21.7541974360273,8.84546591885314,4.91545817507439,0,76.3951852165832,18.2442857776981,54.7643635321394,11.9178350249036,0,5.59518030877778,6.22077260032973,0,0.215649622793364,0.157265941855896,0,0.169732529954025,5.95209776284712,4.95743057036009,0,13.9921914287504,7.01869530511155,0,1.41070377476274,68.5989869271169,11.3685728420733,7.08482881627925,20.4331339593154,4.71767637753736,4.28521883576921,4.84100767249525,12.1106734223888,11.4215536207324,0,0,64.2000094825876,1.03973099535304,30.8919497328405,0,0,34.9728026824046,0.40341013740704,1.56302802246618,2.88097363929565,1.31017534008077,3.84425824164318,7.6317470618786,10.9350933805939,19.2218720746101,8.18063951501398,1.09394961803644,14.8029597051439,30.7650930601362,0,29.3853583571069,10.1783348816874,12.7787814443153,10.9253808762594,14.3427180551317,17.0308550712267,72.021242222362,6.68803236805932,15.6330385846713,7.56386895972764,0,0,31.5542233259066,13.9832875025242,1.68163297988273,2.73947616152849,40.3784595578822,192.533930218481,30.3060547309023,0,0.23248285073625,0.173858272302579,16.8359386593353,21.1360487446298,41.1431529796419,22.1203091780509,20.220685864553,27.4530241694912,29.3986246419094,20.7459654593555,2.7492824225286,3.1020638566432,0.955538938977433,1.23040974977572,3.33710794291826,1.21917924982269,12.30114790657,13.6541533118809,4.6392577253528,3.39997695141398,0,0,0,0,0,5.28369952483357,19.3707136850941,8.08670373864642,0,18.3861241315429,0,38.6727680216442,58.815187264763,9.2984260068348,8.66628284907866,94.9237571596521,59.8169200394796,201.881134968356,3.21397089490184,7.76368717774522,0.882655033580851,5.11235471772562,36.2396133889587,31.9647270427736,1.10440093535229,8.22697031310068,0.872701380680755,19.5739930990698,58.0312228340132,47.6040897490361,47.5889218336168,14.0044731566938,6.33740317389434,0,18.6639558427827,1.87052183685892,43.5581823795165,0,14.246395265029,8.03892390468535,26.5334220626809,23.4792900606502,34.9703730317609,4.99935306073855,49.2813382048727,51.8323864370414,1.45771421354797,27.6865138510017,6.46775004666302,25.4728595039445,3.08009970976753,75.6363555353818,41.4554347169669,13.3064142618405,6.10524514582309,1.60091018816573,7.7228912914776,0.269475606319761,9.38563769613817,33.2496728177397,2.03448089157869,11.3178651611537,90.5732071159618,190.41768442812 | |||
|short_description=p1@TRIM22 | |||
}} |
Revision as of 06:20, 11 January 2014
Short description: | p1@TRIM22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRIM22_5end |
Coexpression cluster: | C413_CD14_Smooth_gall_mesothelioma_meningioma_Fibroblast_Neutrophils |
Association with transcript: | 0bp_to_ENST00000460454, ENST00000545338_5end |
EntrezGene: | TRIM22 |
HGNC: | 16379 |
UniProt: | F5GZK6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.57e-27 | 108 |
hematopoietic system | 7.09e-26 | 98 |
blood island | 7.09e-26 | 98 |
immune system | 1.50e-20 | 93 |
bone marrow | 1.56e-17 | 76 |
lateral plate mesoderm | 5.71e-15 | 203 |
bone element | 3.33e-13 | 82 |
connective tissue | 5.83e-13 | 371 |
skeletal element | 2.98e-12 | 90 |
skeletal system | 3.07e-11 | 100 |
musculoskeletal system | 4.09e-10 | 167 |
mesoderm | 1.16e-09 | 315 |
mesoderm-derived structure | 1.16e-09 | 315 |
presumptive mesoderm | 1.16e-09 | 315 |
blood | 7.11e-08 | 15 |
haemolymphatic fluid | 7.11e-08 | 15 |
organism substance | 7.11e-08 | 15 |