FFCP PHASE1:Hg19::chr11:17297910..17297925,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4925 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8044 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-352bp_to_ENST00000525637_5end | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_16_at_NUCB2_5end | |||
|id=chr11:17297910..17297925,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.77e-08!182;CL:0002032!2.11e-07!165;CL:0000837!2.11e-07!165;CL:0000037!3.37e-07!172;CL:0000566!3.37e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0002127;2.21e-15;1!CL:0000911;2.21e-15;1!CL:0000814;2.21e-15;1!CL:0000097;1.30e-12;5!CL:0000163;2.12e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.54e-15,1;CL:0000914,1.54e-15,1;CL:0000911,1.54e-15,1;CL:0000814,1.54e-15,1;CL:0002042,1.54e-15,1;CL:0002039,1.54e-15,1;CL:0002040,1.54e-15,1;CL:0002041,1.54e-15,1;CL:0000097,1.34e-12,5;CL:0002028,1.34e-12,5;CL:0000988,3.51e-12,177;CL:0000893,2.00e-08,2;CL:0002489,2.00e-08,2;CL:0000809,2.00e-08,2;CL:0000808,2.00e-08,2;CL:0000894,2.00e-08,2;CL:0000806,2.00e-08,2;CL:0000807,2.00e-08,2;CL:0000805,2.00e-08,2;CL:0002425,2.00e-08,2;CL:0000163,2.15e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002425;2.40e-08;2 | |||
|ontology_enrichment_disease=DOID:2531!4.54e-20!51;DOID:0060083!4.54e-20!51;DOID:1240!5.55e-20!39;DOID:8692!6.22e-17!31;DOID:0050686!1.05e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:8692;9.07e-08;31!DOID:1240;4.75e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,4.94e-09,39;DOID:8692,1.53e-07,31;DOID:2531,6.82e-07,51;DOID:0060083,6.82e-07,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;3.15e-23;10!UBERON:0000478;7.31e-10;24!UBERON:0000178;2.75e-09;15!UBERON:0000179;2.75e-09;15!UBERON:0000463;2.75e-09;15!UBERON:0001905;1.73e-08;2!UBERON:0002757;1.73e-08;2!UBERON:0010134;1.73e-08;2!UBERON:0005408;1.73e-08;2!UBERON:0001899;1.73e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,3.34e-23,10;UBERON:0000358,3.34e-23,10;UBERON:0000307,3.34e-23,10;UBERON:0000091,3.34e-23,10;UBERON:0000087,3.34e-23,10;UBERON:0007010,3.34e-23,10;UBERON:0007806,3.34e-23,10;UBERON:0008780,3.34e-23,10;UBERON:0005728,3.34e-23,10;UBERON:0000478,7.48e-10,24;UBERON:0000178,2.71e-09,15;UBERON:0000179,2.71e-09,15;UBERON:0000463,2.71e-09,15;UBERON:0002390,1.43e-08,98;UBERON:0003061,1.43e-08,98;UBERON:0001905,1.73e-08,2;UBERON:0002757,1.73e-08,2;UBERON:0010134,1.73e-08,2;UBERON:0005408,1.73e-08,2;UBERON:0001899,1.73e-08,2;UBERON:0002193,1.03e-07,108 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687720651731561,1.06730766284929,0.629686250509434,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0.289803085735052,0,0.267540828089713,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0.324547393654683,0.348259474598534,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0.573673241497627,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0.300476117813194,0,0,0,0.211931901159562,0.300091096084402,0,0,0,0,0,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0.702012795417713,0.297262324577456,0,0,0,0,0,0,13.7945706610864,4.66656700270098,0,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,1.14861935834114,0,0,0,0,1.68127715990291,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0.308419387605311,0,0,0,0,0,0,0,0.68888668898764,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0.0915694648183434,0,0,0,0,0,0.462145851343933,0.15350367472613,0.275673144969061,0,0,0.426133137080504,0.0890320356467374,0,0.192190067365106,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.409499734223957,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0.329294892959902,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0.144269212976445,0.213425530045242,0.956557636372934,0.399158742865633,0.383010740264733,0,0,0,0.456469358066384,0.47003968731907,0,0,0.1605880751037,0.403599414382095,0.851692475380653,0.343505344755765,1.84344458585075,0.223676107892416,0.500547425135725,0.390776190804081,1.11362469558097,1.23087398947712,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0.332423363800313,0.225595660617181,0.392125068635479,1.1747511088309,0,0.158936578980379,0,0,0,0,0,0,0,3.85477467284809,5.43681331364613,4.9078316267564,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0.195984794828755,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0.0787831823072236,0,0,0.0984274815147488,0.0846733320657845,0.795229689809303,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.681552087141687,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0.235265819698172,0,0,0.298509605773748,0,0,0.378806010550178,0,0,0,0.151230923763239,0.15543720058278,0.295710299979268,0.159296767163702,0,0,0.414706207840855,0,0.521745061811734,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79994958341972,0.426766918776564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,2.14280734351315,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0.193766729508018,0.186224142887574,0,0,0,0,0,0,0.0717222053926763,0.332660356546013,0.162806537221949,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p16@NUCB2 | |||
}} |
Revision as of 06:47, 11 January 2014
Short description: | p16@NUCB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_NUCB2_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | -352bp_to_ENST00000525637_5end |
EntrezGene: | NUCB2 |
HGNC: | 8044 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.54e-15 | 1 |
immature NK T cell | 1.54e-15 | 1 |
effector T cell | 1.54e-15 | 1 |
mature NK T cell | 1.54e-15 | 1 |
immature NK T cell stage IV | 1.54e-15 | 1 |
immature NK T cell stage I | 1.54e-15 | 1 |
immature NK T cell stage II | 1.54e-15 | 1 |
immature NK T cell stage III | 1.54e-15 | 1 |
mast cell | 1.34e-12 | 5 |
basophil mast progenitor cell | 1.34e-12 | 5 |
hematopoietic cell | 3.51e-12 | 177 |
thymocyte | 2.00e-08 | 2 |
double negative thymocyte | 2.00e-08 | 2 |
double-positive, alpha-beta thymocyte | 2.00e-08 | 2 |
DN4 thymocyte | 2.00e-08 | 2 |
DN1 thymic pro-T cell | 2.00e-08 | 2 |
DN2 thymocyte | 2.00e-08 | 2 |
DN3 thymocyte | 2.00e-08 | 2 |
immature single positive thymocyte | 2.00e-08 | 2 |
early T lineage precursor | 2.00e-08 | 2 |
endocrine cell | 2.15e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 3.34e-23 | 10 |
blastocyst | 3.34e-23 | 10 |
blastula | 3.34e-23 | 10 |
bilaminar disc | 3.34e-23 | 10 |
inner cell mass | 3.34e-23 | 10 |
cleaving embryo | 3.34e-23 | 10 |
connecting stalk | 3.34e-23 | 10 |
inner cell mass derived epiblast | 3.34e-23 | 10 |
extraembryonic mesoderm | 3.34e-23 | 10 |
extraembryonic structure | 7.48e-10 | 24 |
blood | 2.71e-09 | 15 |
haemolymphatic fluid | 2.71e-09 | 15 |
organism substance | 2.71e-09 | 15 |
hematopoietic system | 1.43e-08 | 98 |
blood island | 1.43e-08 | 98 |
pineal body | 1.73e-08 | 2 |
regional part of epithalamus | 1.73e-08 | 2 |
secretory circumventricular organ | 1.73e-08 | 2 |
circumventricular organ | 1.73e-08 | 2 |
epithalamus | 1.73e-08 | 2 |
hemolymphoid system | 1.03e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
leukemia | 4.94e-09 | 39 |
myeloid leukemia | 1.53e-07 | 31 |
hematologic cancer | 6.82e-07 | 51 |
immune system cancer | 6.82e-07 | 51 |