FFCP PHASE1:Hg19::chr11:16629650..16629667,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55553 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16421 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-376bp_to_ENST00000525835_5end | |||
|coexpression_cluster_id=C90 | |||
|description=CAGE_peak_22_at_SOX6_5end | |||
|id=chr11:16629650..16629667,- | |||
|ontology_enrichment_celltype=CL:0002319!3.48e-08!25;CL:0000242!7.06e-07!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!1.67e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:171;4.30e-55;10!DOID:3095;2.83e-25;22!DOID:2994;2.83e-25;22!DOID:3193;1.65e-12;2!DOID:962;1.65e-12;2!DOID:1192;8.96e-09;3 | |||
|ontology_enrichment_disease_v019_2=DOID:171,5.69e-55,10;DOID:3095,3.21e-25,22;DOID:2994,3.21e-25,22;DOID:3193,1.65e-12,2;DOID:962,1.65e-12,2;DOID:1192,8.96e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0002346!2.07e-21!90;UBERON:0005743!5.30e-20!86;UBERON:0001017!8.07e-20!82;UBERON:0001049!2.26e-19!57;UBERON:0005068!2.26e-19!57;UBERON:0006241!2.26e-19!57;UBERON:0007135!2.26e-19!57;UBERON:0000073!5.93e-19!94;UBERON:0001016!5.93e-19!94;UBERON:0002791!1.53e-17!33;UBERON:0002020!5.28e-17!34;UBERON:0003528!5.28e-17!34;UBERON:0001893!6.42e-17!34;UBERON:0003075!4.74e-16!86;UBERON:0007284!4.74e-16!86;UBERON:0000924!5.48e-16!173;UBERON:0006601!5.48e-16!173;UBERON:0000955!5.53e-16!69;UBERON:0006238!5.53e-16!69;UBERON:0002780!2.18e-15!41;UBERON:0001890!2.18e-15!41;UBERON:0006240!2.18e-15!41;UBERON:0002616!5.00e-15!59;UBERON:0003080!6.36e-15!42;UBERON:0001869!5.54e-14!32;UBERON:0000956!7.06e-14!25;UBERON:0000203!7.06e-14!25;UBERON:0004121!2.74e-12!169;UBERON:0007023!4.29e-12!115;UBERON:0002619!2.69e-11!22;UBERON:0001950!2.25e-10!20;UBERON:0003056!3.69e-10!61;UBERON:0000033!3.41e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;7.84e-88;4!UBERON:0000923;7.84e-88;4!UBERON:0010316;7.84e-88;4!UBERON:0005291;7.84e-88;4!UBERON:0002050;1.98e-70;5!UBERON:0005423;1.98e-70;5!UBERON:0003714;1.65e-12;2!UBERON:0000007;3.62e-12;2!UBERON:0000922;7.93e-09;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,1.65e-12,2;UBERON:0000007,3.62e-12,2;UBERON:0002346,4.40e-09,86 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0.27470839445503,0.330037999682352,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.19924798825107,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,2.33283690706603,0.173624994933292,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0.503464760927528,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.687481272035051,0,0,0.429226048136571,0.223171457441873,0.0671834724867263,0,0,0,0,0,0.196854963029498,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0,0,0.124980407962107,0,0.856396000634902,0,0.936669811613763,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20652288940233,12.5419202859993,2.10690799240304,6.14509409770568,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0.252071696221718,0.138314504928436,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0.206686796501184,0,2.18789923607288,0,0,2.28632617667507,0,0,0,0,1.13831095675649,0.0887023701626388,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,2.95559062914385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.701818390386317,0,0,0,0.109940516745429,0,0.0771741581079447,0.218559560503957,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0.157771562193185,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404234377916439,0,0,0,0.0717222053926763,0.665320713092027,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p22@SOX6 | |||
}} |
Revision as of 06:46, 11 January 2014
Short description: | p22@SOX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_SOX6_5end |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | -376bp_to_ENST00000525835_5end |
EntrezGene: | SOX6 |
HGNC: | 16421 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tissue | 1.65e-12 | 2 |
pituitary gland | 3.62e-12 | 2 |
neurectoderm | 4.40e-09 | 86 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 5.69e-55 | 10 |
germ cell and embryonal cancer | 3.21e-25 | 22 |
germ cell cancer | 3.21e-25 | 22 |
peripheral nerve sheath neoplasm | 1.65e-12 | 2 |
neurofibroma | 1.65e-12 | 2 |
peripheral nervous system neoplasm | 8.96e-09 | 3 |