FFCP PHASE1:Hg19::chr11:118780155..118780169,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:118780155..118780169,+ | |||
|id=chr11:118780155..118780169,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.00e-27!180;CL:0000057!1.18e-11!75;CL:0000183!5.96e-10!59;CL:0000192!2.45e-09!42;CL:0000514!2.45e-09!42;CL:0000393!2.91e-09!60;CL:0000211!2.91e-09!60;CL:0000220!4.08e-09!246;CL:0000680!5.10e-09!57;CL:0000056!5.10e-09!57;CL:0000355!5.10e-09!57;CL:0000187!7.60e-09!54;CL:0002321!7.96e-09!248;CL:0000359!2.14e-08!32 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.89e-08;32!CL:0000192;1.93e-07;43!CL:0000136;7.31e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,3.65e-09,43;CL:0000514,3.65e-09,43;CL:0000359,1.07e-08,32;CL:0000057,1.71e-08,76;CL:0000136,2.40e-08,15;CL:0000187,6.53e-08,55;CL:0000680,1.56e-07,58;CL:0000056,1.56e-07,58;CL:0000355,1.56e-07,58;CL:0000393,1.81e-07,61;CL:0000211,1.81e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;1.93e-07;43 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.24e-15!365;UBERON:0002100!1.98e-13!216;UBERON:0000481!2.16e-12!347;UBERON:0003104!7.84e-11!238;UBERON:0009142!7.84e-11!238;UBERON:0005256!8.98e-11!143;UBERON:0000914!1.58e-10!83;UBERON:0002329!1.58e-10!83;UBERON:0003077!1.58e-10!83;UBERON:0003059!1.58e-10!83;UBERON:0007282!1.58e-10!83;UBERON:0009618!1.58e-10!83;UBERON:0007285!1.58e-10!83;UBERON:0004290!1.60e-09!70;UBERON:0001134!5.31e-08!61;UBERON:0002036!5.31e-08!61;UBERON:0003082!5.31e-08!61;UBERON:0002385!1.14e-07!63;UBERON:0001015!1.14e-07!63;UBERON:0000383!1.14e-07!63;UBERON:0000468!1.95e-07!659;UBERON:0000477!7.64e-07!286;UBERON:0000486!7.78e-07!82;UBERON:0000119!8.54e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;4.09e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.34e-09,199;UBERON:0007503,1.19e-08,78;UBERON:0002329,5.20e-08,71;UBERON:0003059,5.20e-08,71;UBERON:0007282,5.20e-08,71;UBERON:0004290,5.20e-08,71;UBERON:0009618,5.20e-08,71;UBERON:0007524,5.88e-08,73;UBERON:0003077,9.45e-08,72;UBERON:0007285,9.45e-08,72;UBERON:0001637,2.33e-07,42;UBERON:0003509,2.33e-07,42;UBERON:0004572,2.33e-07,42;UBERON:0005256,2.93e-07,122;UBERON:0004573,7.35e-07,33;UBERON:0004571,7.35e-07,33 | |||
|phase1_expression=1.09007027562334,1.2846031433459,1.55049844505568,3.00219895059391,2.23480547213644,2.61701557230111,2.53299878168311,0,1.30592814099919,1.22866968250754,3.48900583986214,0.218441372130172,0.263766978228454,0.618831764800233,0.331397375727916,0,1.80808358407193,2.92124036154949,0.975865597581014,1.96993692922861,1.22400414746552,2.5076377718247,0.85870796139317,1.09499540058307,0.753255837568817,0,0,0,0,0,0,0,1.50602959389125,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,3.00802746381534,0.434539556882471,1.5905718941022,0.973269740605272,0.756278537312543,0.443458794925128,0.43917392846563,0.261958150995425,1.09288586487763,0.370784442784429,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0.71153252537342,0,0.402829317109147,1.52054421143703,0,0,0,0.0892997282840798,0,0,0,0.949265659568129,0.366403487860815,0,0,0,0,0.633152558322899,8.34177839123278,2.0078563452417,0.354668382198357,1.12135520028461,6.4049397437823,1.72667283892012,0.311211035399766,0.538842688278752,0.817309515567294,0.454072282934794,1.15235184896,2.10889288650417,0,0.570471821544449,0.597794722207204,1.17434498643765,1.45685649931318,1.12360645361799,1.02077085627447,1.35117749042945,1.44656093646072,0,2.96720315134268,0.910161361938026,3.59309070908119,0.841680569770331,1.12606667884768,0.554128230968366,3.5118209670467,1.5324389789951,1.95309476578576,0.340296549480063,3.22901344239952,1.49490172172997,1.48352330811693,0.900273288253207,2.06105058476878,2.31876486041066,1.8611685633159,2.53164498361899,1.26668106709558,0.757301322732344,3.31379635112278,2.26304479546337,0.355009592516614,1.81353776809752,3.05209066158878,0.386521706326594,0.272746120590835,0.573609190778008,0.121973706129595,0,0,0.10366105501537,0,0.36497735907583,3.12899064659632,3.21620469096443,17.9575397758225,0.464367928031979,0.721879481669586,1.77460200059766,2.86593973132773,2.16909926895134,2.86764329104224,2.61455332910887,3.32178866755535,2.29213223872279,2.5508790466295,0.769494313892781,0,0,0.8231480226628,1.47008711385542,0,0,0,0,1.72183813960359,0.343135620597051,0.219500570817251,1.1240175325762,0.201057944823262,0.277765335475589,0.651616610620649,0,0,0.579652024875384,0.939269553886573,0.721832238805369,0.462985512576611,0,3.1608175918371,8.58486162094873,0,0,0,0.93733833986777,0.503946384596579,0.425325291727159,0,0.581267877027924,0.766765358330422,0,0,0,0.144119953416961,0,0.444485260045183,3.05590740446622,12.8939191931052,8.55362230113526,1.64523988325318,1.50171528921959,0.285826432630578,1.45770409648969,0.43596006883328,0.66004457238855,0.258543431515556,10.7296933755565,0.845302752556,1.86156681609409,3.12022310734098,1.80045161983499,1.41849132023278,0.799266537048298,1.00084595560703,2.71310802695722,0,0,1.06617584622764,0.791951872933429,0.602878754119172,0.871533458600294,0.799783929456456,0,0,0,0.718874566474748,2.29723871668228,0,0.434343920002738,0.821905290201534,1.07436577943937,0,0,0,0,0.76228387266739,0,0.773288812777695,0.167516265334349,2.55175500661265,0,0,0,0.858840442033979,2.00068208423871,0.271265023699736,1.45579603071565,1.24900292158013,1.73472656537328,2.45996971484698,0.902838299183157,0,2.0694614258501,1.99267679560631,2.39679919104214,1.56390506042549,3.32861967686659,1.37257369524342,0,0,0,4.54691357169389,1.66435439510497,0.604780586659361,2.72918588600655,4.60385919864187,0.841980283299221,2.30650468660262,1.53512174720011,1.44768529029247,1.48418066444991,1.07946785661859,0.532685175939381,0.657017248110473,0.519254429183621,0.348631135379878,0.846016147141356,0.40101294060657,0.0920809889358963,0.68888668898764,1.0925470080403,1.57349297951309,1.35359883872224,0.693138033939733,0.784349769176855,0,0.211103257785751,1.13733384070897,0.170093705276516,0.647747748306418,0,1.08378575017541,2.50844886927427,1.01950509218015,2.49322802678617,0.671624264166535,0,0,1.02580050046556,0.328014645699706,1.30151357865721,1.23649213977267,2.38080608527693,1.81520899825294,1.14853107599234,0.650060246036521,1.6068392984416,1.7400729292582,0.924291702687866,0.767518373630648,0.413509717453592,1.39646318328756,1.74020032697074,0.596586391912706,1.78064071293475,0,0,0.638063562472921,0,0,2.20368642781448,8.3644472419272,2.46426864140871,2.66153015158511,4.34966496037536,3.52116016297448,0.572499546967965,0.372158369359667,0.632758849437452,0.571890581771475,2.81487570442467,0,2.54562598340749,4.70969184119538,0.899362287916574,1.37268514868027,1.64937363283961,2.62837226045311,1.58510321173008,1.26377536871694,2.43816869544795,1.21856744815642,2.11300293513511,1.09199929126389,0.848432591722276,0,4.96228809191512,0.66343897524122,1.75380354101505,0,0,2.84074527747786,5.26699946769575,3.09865162785466,0.573645408816206,0.392996164052485,2.49669736036875,1.77380532035299,0,0,1.51789269506286,0.699869440489966,0.48111056362756,2.68120910214315,1.08890984861323,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,1.19372242368845,1.18785872333055,0.614321404198464,0,0.844016498463076,5.12020043105367,0,0,1.39473591775749,0.828851746593443,0.251932747854276,0.613612095012929,0,0,1.88723537409386,0.895105873378046,0,0.690503839458535,0,2.22273980289274,0.969332746095218,0.0927680981618513,0,2.08342208868187,2.0990399999087,2.17499872630438,0.1137934482855,1.77977555204936,0.236387681767936,0,0,0.520874984799877,0,0,0,3.75969483766164,0.591095237907095,0.219385397153973,0.10893846351899,1.39423744278603,0.692552326534174,0.91153644677601,0.69169171316418,0.0897576444097721,0.434589487688032,0.957003479195758,1.64875668123352,0,0,0.156980256395025,0,0,0,0,0,0,0.421996129056054,0,0.706765357169704,0,0.995261931078505,0.0884575645033392,0,0,0,0,0.202203398942031,0.802577647298789,0.234264445725339,0,2.15231080825299,0.242780379534093,0,0,0.91821828489147,0.063186579628488,0.150323419414493,0.311064574191741,0,0.330991955875499,0.627865836814451,0,0.284609546029793,1.24807205711825,0,0.0979923974143777,0.0870592065804026,0,6.36348320144981,0.483781656445426,0.803982487948041,0.739039113478883,0.0969890164884194,0,0.677942222341597,0.685209623233754,1.78843150532691,0.633107959558787,0.586654148204409,0.320635281006135,0,0,1.44090417154106,0.114536596165916,0,0,1.49103042678519,0.235694034616795,0.815425236441684,0.836822770498666,1.83596791745379,1.15580235960608,0.600420288709789,0.684526894459965,0,0.429765441419957,0,0.558564802544508,0.229160424011684,3.58936512288407,0.798716001995964,0.858452096273142,1.33902874465124,2.68733889946905,0.720599767084807,0,0.157566364614447,0.0824158583811665,0.0674035438541849,3.05125192695721,0,0.795229689809303,0.408610218334727,1.12527203925513,0.275078873194468,0.83088067605837,0,0,0.546746009922222,0,0,0.944182586429966,2.00640639386872,0,1.91915197319445,0.714695326373367,0,1.27134268827375,0.542999601753713,0.864221491201268,0.979762080328227,0,0,2.55582032678133,0,0,0,0,0.13223260174269,0.513260513652988,0.704815022316672,1.81538601365081,1.88645166119599,0,0,0,0,0,1.63205341010842,1.7548292581589,1.53172788381731,1.63936315354902,0,0,0.244052529803926,1.001527445652,0,0.332787154610557,0.124192805882767,0.968440444553616,0.74988244777264,1.36484205787483,0,0.470531639396343,0,0,1.34329322598187,1.8697064787778,0,1.7046270474758,1.0062716070103,0.889811221596536,0.915360273587694,1.36107831386915,1.24349760466224,0.591420599958536,1.11507737014592,0.449803112163605,1.24210365501008,0.829412415681711,0.797525143673985,0,1.05180326298053,1.14241563650639,0.406870733204662,2.36403256963327,1.71856891267982,3.24823631914946,1.19428766609585,0.400027764663154,3.43395705182793,1.6837474438296,6.30924491143255,0.963099152036517,3.43106546199881,2.60994291965212,0.453411851024545,1.85217979459067,1.22368352253234,0.358177682162975,3.70561736593167,3.94711289241673,2.47364804324233,0.771656153083659,1.18259708457151,1.28120759293973,2.76344273384959,0.911579868532147,0.967809053062115,0.389720617678777,0.132864840313363,0.163565394255844,1.63804924423206,0.491545817507439,2.3244333569449,0,0,0,0,1.84105950251841,0.419638523158333,0,0,0,1.10086159299127,1.96577348745625,1.18812770967818,1.2754495206101,1.36329340684902,0,0,0.0788617450012534,0,1.05802783107205,0,0.385375350578757,0,0.319267718114302,1.02558182120378,0.252071696221718,0.345786262321089,0,0,0,0,0.183428598521679,0.577628330751691,0,1.3807198521202,2.18807844327902,0.977734268540344,1.21023041222112,0,0.523813388962845,1.96526301012116,2.21784129325568,0.337687923091973,0,0.413373593002368,0.443910671357348,0.546974809018219,0,0,4.22090986463089,0.383287282918786,2.67850917939143,1.68141861109412,0,0.227662191351298,0.0887023701626388,0,3.08678416987353,0,0.394636641377094,2.6002644994473,1.00108261702862,0.470958557103084,0,0.840816489941367,0,3.67076905071656,1.9110067515482,0.500335809236594,0.47404083519818,0.697448552208751,1.39086617842064,0.801711364730253,0.207216164163037,0.3414369541879,0.691259661814092,0,1.18332000730565,1.19298766662821,1.27016115057279,0,0,0,0.111855431797792,1.86485443868962,1.21917924982269,0,0.205325613712494,0,0,0,2.98426162742052,0.118920090777569,0,0.549702583727146,0.452888530700021,0.0771741581079447,0,0,0.245148321753905,0,0.588925401344836,0.297046400327086,0,1.35941691750254,0.469919589899268,0.644578879735772,0,0,0.352894871715692,0,0,0,0.716697915757256,0.315543124386369,0.135982980381829,0,0,0.371995018166751,0,0.865253124247578,0.126166424835079,0,4.43444753540029,0.203977659483963,0,0.551369397209069,0,0.454672189309436,0.267964130156178,0.829169439458779,0.517164979309476,0.426467963801962,0,0.129177819672012,0.124149428591716,2.91542842709595,0.25458863311266,0,1.08858373948481,0,0,0.430333232356058,0,0.0814032686109745,0.747091421144008,0,0.0898252021065869,0,0,0.813792356631477,1.99727032255654,0,0 | |||
|short_description=p@chr11:118780155..118780169,+ | |||
}} |
Revision as of 10:41, 11 January 2014
Short description: | p@chr11:118780155..118780169, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:118780155..118780169, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.65e-09 | 43 |
smooth muscle myoblast | 3.65e-09 | 43 |
vascular associated smooth muscle cell | 1.07e-08 | 32 |
fibroblast | 1.71e-08 | 76 |
fat cell | 2.40e-08 | 15 |
muscle cell | 6.53e-08 | 55 |
muscle precursor cell | 1.56e-07 | 58 |
myoblast | 1.56e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.56e-07 | 58 |
electrically responsive cell | 1.81e-07 | 61 |
electrically active cell | 1.81e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
trunk | 1.34e-09 | 199 |
epithelial vesicle | 1.19e-08 | 78 |
somite | 5.20e-08 | 71 |
presomitic mesoderm | 5.20e-08 | 71 |
presumptive segmental plate | 5.20e-08 | 71 |
dermomyotome | 5.20e-08 | 71 |
trunk paraxial mesoderm | 5.20e-08 | 71 |
dense mesenchyme tissue | 5.88e-08 | 73 |
paraxial mesoderm | 9.45e-08 | 72 |
presumptive paraxial mesoderm | 9.45e-08 | 72 |
artery | 2.33e-07 | 42 |
arterial blood vessel | 2.33e-07 | 42 |
arterial system | 2.33e-07 | 42 |
trunk mesenchyme | 2.93e-07 | 122 |
systemic artery | 7.35e-07 | 33 |
systemic arterial system | 7.35e-07 | 33 |