FFCP PHASE1:Hg19::chr11:117103333..117103419,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=257160 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25335 | |||
|TSSclassifier=strong | |||
|UniProt=E9PRE9,B2RUW0,Q8ND24 | |||
|association_with_transcript=0bp_to_ENST00000529869,ENST00000534428,NM_207343,uc001pqt.2_5end | |||
|description=CAGE_peak_1_at_RNF214_5end | |||
|id=chr11:117103333..117103419,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.17e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.16e-23!94;UBERON:0001016!2.16e-23!94;UBERON:0001017!8.82e-21!82;UBERON:0005743!8.89e-21!86;UBERON:0001049!7.81e-20!57;UBERON:0005068!7.81e-20!57;UBERON:0006241!7.81e-20!57;UBERON:0007135!7.81e-20!57;UBERON:0000955!5.44e-18!69;UBERON:0006238!5.44e-18!69;UBERON:0007023!6.00e-18!115;UBERON:0002616!3.67e-17!59;UBERON:0002346!6.34e-16!90;UBERON:0000924!7.42e-16!173;UBERON:0006601!7.42e-16!173;UBERON:0002780!1.60e-15!41;UBERON:0001890!1.60e-15!41;UBERON:0006240!1.60e-15!41;UBERON:0003080!3.30e-15!42;UBERON:0001893!1.27e-14!34;UBERON:0004121!2.26e-14!169;UBERON:0003075!3.43e-14!86;UBERON:0007284!3.43e-14!86;UBERON:0002791!4.18e-14!33;UBERON:0001869!1.17e-13!32;UBERON:0000153!1.46e-13!129;UBERON:0007811!1.46e-13!129;UBERON:0002020!2.17e-13!34;UBERON:0003528!2.17e-13!34;UBERON:0000033!6.14e-13!123;UBERON:0003056!5.50e-12!61;UBERON:0000956!2.05e-10!25;UBERON:0000203!2.05e-10!25;UBERON:0002619!8.43e-10!22;UBERON:0001950!5.81e-09!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;6.82e-13;34!UBERON:0001869;2.48e-12;32!UBERON:0002791;3.61e-12;32!UBERON:0003528;5.06e-12;34!UBERON:0002020;5.06e-12;34!UBERON:0000073;6.03e-12;53!UBERON:0002616;6.03e-12;53!UBERON:0002780;9.83e-12;41!UBERON:0001890;9.83e-12;41!UBERON:0000956;1.86e-10;25!UBERON:0000203;1.86e-10;25!UBERON:0002619;8.03e-10;22!UBERON:0001017;2.13e-09;75!UBERON:0001016;4.12e-09;83!UBERON:0001950;5.14e-09;20!UBERON:0000955;8.29e-09;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.31e-23,89;UBERON:0001017,5.38e-21,81;UBERON:0001049,3.86e-20,56;UBERON:0005068,3.86e-20,56;UBERON:0006241,3.86e-20,56;UBERON:0007135,3.86e-20,56;UBERON:0000073,1.23e-18,53;UBERON:0002616,1.23e-18,53;UBERON:0000955,3.27e-18,68;UBERON:0006238,3.27e-18,68;UBERON:0007023,1.56e-17,114;UBERON:0002346,1.12e-16,86;UBERON:0004121,3.49e-16,171;UBERON:0000924,3.49e-16,171;UBERON:0006601,3.49e-16,171;UBERON:0002780,1.60e-15,41;UBERON:0001890,1.60e-15,41;UBERON:0003080,1.60e-15,41;UBERON:0006240,1.60e-15,41;UBERON:0003075,6.80e-15,82;UBERON:0007284,6.80e-15,82;UBERON:0001893,1.27e-14,34;UBERON:0001869,1.17e-13,32;UBERON:0002791,1.84e-13,32;UBERON:0003528,2.17e-13,34;UBERON:0002020,2.17e-13,34;UBERON:0003056,3.07e-12,61;UBERON:0010314,1.12e-10,132;UBERON:0010371,1.15e-10,104;UBERON:0011216,1.96e-10,223;UBERON:0000956,2.05e-10,25;UBERON:0000203,2.05e-10,25;UBERON:0002619,8.43e-10,22;UBERON:0001950,5.81e-09,20 | |||
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| |||
|short_description=p1@RNF214 | |||
}} |
Revision as of 10:32, 11 January 2014
Short description: | p1@RNF214 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RNF214_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000529869, ENST00000534428, NM_207343, uc001pqt.2_5end |
EntrezGene: | RNF214 |
HGNC: | 25335 |
UniProt: | E9PRE9B2RUW0Q8ND24 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data