FFCP PHASE1:Hg19::chr10:8108424..8108428,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3051 | |||
|description=CAGE_peak_at_chr10:8108424..8108428,+ | |||
|id=chr10:8108424..8108428,+ | |||
|ontology_enrichment_celltype=CL:0000084!1.42e-11!25;CL:0000827!1.42e-11!25;CL:0000791!4.62e-11!18;CL:0000789!4.62e-11!18;CL:0002420!4.62e-11!18;CL:0002419!4.62e-11!18;CL:0000790!4.62e-11!18;CL:0000624!3.47e-10!6;CL:0000838!8.20e-09!52;CL:0000542!1.56e-08!53;CL:0000051!1.56e-08!53 | |||
|ontology_enrichment_celltype_v019=CL:0000084;3.43e-17;25!CL:0000624;1.29e-15;6!CL:0000791;5.30e-15;18!CL:0000789;5.30e-15;18!CL:0002419;5.30e-15;18!CL:0000623;9.80e-09;3!CL:0000039;3.34e-08;7!CL:0000586;3.34e-08;7!CL:0000542;7.44e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,4.72e-17,25;CL:0000827,4.72e-17,25;CL:0000624,1.62e-15,6;CL:0000791,5.79e-15,18;CL:0000789,5.79e-15,18;CL:0002420,5.79e-15,18;CL:0002419,5.79e-15,18;CL:0000790,5.79e-15,18;CL:0000838,3.11e-11,52;CL:0000542,5.53e-11,53;CL:0000051,5.53e-11,53;CL:0000623,1.29e-08,3;CL:0000825,1.29e-08,3;CL:0000039,2.78e-08,7;CL:0000586,2.78e-08,7 | |||
|ontology_enrichment_development_v019=CL:0000790;5.30e-15;18!UBERON:0005754;2.75e-07;1!UBERON:0008425;6.30e-07;1!CL:0000051;7.44e-07;53 | |||
|ontology_enrichment_disease=DOID:5093!5.83e-08!4;DOID:1612!5.83e-08!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;8.99e-24;4!DOID:1612;8.99e-24;4!DOID:3095;5.22e-09;22!DOID:2994;5.22e-09;22!DOID:0060060;6.30e-07;1!DOID:1799;6.30e-07;1!DOID:10165;6.30e-07;1!DOID:0060061;6.30e-07;1!DOID:1798;6.30e-07;1!DOID:8691;6.30e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,5.66e-24,4;DOID:1612,5.66e-24,4;DOID:3095,3.84e-09,22;DOID:2994,3.84e-09,22;DOID:1799,6.49e-07,1;DOID:10165,6.49e-07,1;DOID:1798,6.49e-07,1;DOID:0060060,8.18e-07,1;DOID:0060061,8.18e-07,1;DOID:8691,8.18e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;1.34e-09;10!UBERON:0001443;9.84e-09;11!UBERON:0006947;1.19e-08;3!UBERON:0004054;1.19e-08;3!UBERON:0000998;2.75e-07;1!UBERON:0006868;2.75e-07;1!UBERON:0001000;6.30e-07;1!UBERON:0005352;6.30e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,1.12e-09,10;UBERON:0001443,8.38e-09,11;UBERON:0006947,1.19e-08,3;UBERON:0004054,1.19e-08,3;UBERON:0000998,3.01e-07,1;UBERON:0006868,3.01e-07,1;UBERON:0001000,5.78e-07,1;UBERON:0005352,5.78e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57367816091066,2.75107533924415,2.46721798799411,0,0.32592226663359,0,0,1.89397776704795,1.17842362989935,0.886135578334485,0.270803863765016,2.0494611156108,1.69077151827842,3.28875809207352,1.10540007114339,0.869409257205157,0.14828656316206,0.267540828089713,1.04535523804977,0.339928028092699,0.766440987203842,0,0.506039384039006,0,0.651083453856419,0,0,0.255973222308837,0,0,0,1.61285394579786,5.34880391567015,2.60683926989038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0.122988438543114,0.171567810298526,0.219500570817251,0,0.100528972411631,0,0,0,0,0,0,0,0,0,6.3216351836742,4.29243081047436,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0.591092280605782,3.01878604803324,1.15508732651774,0,1.30139853857622,0,0,0,0,2.99161459204025,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.184161977871793,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658589785919804,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0.144269212976445,0.355709216742071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.99921590399346,0,0,0,0,1.11443384277478,0,0,0.593929361665277,1.84296421259539,0,0,0.111308705022906,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,1.30213880542617,1.92411999991631,0.724999575434793,0,0,0.472775363535873,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.153900517007594,0,4.38071418337314,1.88491053260521,4.23724750495832,0,0.0915975934018623,2.66517388009317,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,0,0.104421949505455,0,0,0,0,0,0,1.57833761139756,0,0,0,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0.0870592065804026,0.698906672968121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0.837847203816763,0,0.717873024576814,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0.335434687599266,0,0.104909176269996,0,0,0.959575986597226,0,0,0,0,0,0,0,0,0.681552087141687,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19992437512958,0,0,0,0,0,0,1.79052119825112,0.539124056983409,0,1.85656384926424,0,0.212574920101683,0.743614585554013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,1.30953347240711,0,0,0,0,0,0,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0.620916591138472,0.115233987555779,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0.3414369541879,0,0.430227358820278,0,0,2.54032230114557,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0.118920090777569,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473314686579554,0,0,0,0,0,0,0,0,2.91406552326305,0.203977659483963,0,0,0,0,0,0,0,0,0.23806443146374,0.387533459016037,0.248298857183432,0.112131862580613,0,0.404234377916439,0,0,0.0673520530145875,0,0,0.244209805832924,0.213454691755431,0,0.0898252021065869,0,0,0,0,0.402547587182052,0 | |||
|short_description=p@chr10:8108424..8108428,+ | |||
}} |
Revision as of 01:39, 11 January 2014
Short description: | p@chr10:8108424..8108428, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:8108424..8108428, + |
Coexpression cluster: | C3051_MCF7_CD4_CD8_seminal_breast_choriocarcinoma_teratocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 4.72e-17 | 25 |
pro-T cell | 4.72e-17 | 25 |
CD4-positive, alpha-beta T cell | 1.62e-15 | 6 |
mature alpha-beta T cell | 5.79e-15 | 18 |
alpha-beta T cell | 5.79e-15 | 18 |
immature T cell | 5.79e-15 | 18 |
mature T cell | 5.79e-15 | 18 |
immature alpha-beta T cell | 5.79e-15 | 18 |
lymphoid lineage restricted progenitor cell | 3.11e-11 | 52 |
lymphocyte | 5.53e-11 | 53 |
common lymphoid progenitor | 5.53e-11 | 53 |
natural killer cell | 1.29e-08 | 3 |
pro-NK cell | 1.29e-08 | 3 |
germ line cell | 2.78e-08 | 7 |
germ cell | 2.78e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
breast | 1.12e-09 | 10 |
chest | 8.38e-09 | 11 |
male genital duct | 1.19e-08 | 3 |
internal male genitalia | 1.19e-08 | 3 |
seminal vesicle | 3.01e-07 | 1 |
seminal fluid secreting gland | 3.01e-07 | 1 |
vas deferens | 5.78e-07 | 1 |
spermatic cord | 5.78e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 5.66e-24 | 4 |
breast cancer | 5.66e-24 | 4 |
germ cell and embryonal cancer | 3.84e-09 | 22 |
germ cell cancer | 3.84e-09 | 22 |
islet cell tumor | 6.49e-07 | 1 |
endocrine pancreas cancer | 6.49e-07 | 1 |
pancreatic endocrine carcinoma | 6.49e-07 | 1 |
non-Hodgkin lymphoma | 8.18e-07 | 1 |
cutaneous T cell lymphoma | 8.18e-07 | 1 |
mycosis fungoides | 8.18e-07 | 1 |