FFCP PHASE1:Hg19::chr10:77273938..77273947,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3048 | |||
|description=CAGE_peak_at_chr10:77273938..77273947,+ | |||
|id=chr10:77273938..77273947,+ | |||
|ontology_enrichment_celltype=CL:0000557!9.63e-22!71;CL:0000839!6.18e-21!70;CL:0000763!8.36e-21!112;CL:0000049!8.36e-21!112;CL:0000766!1.04e-20!76;CL:0002194!2.68e-20!63;CL:0000576!2.68e-20!63;CL:0000040!2.68e-20!63;CL:0000559!2.68e-20!63;CL:0002009!4.00e-19!65;CL:0002057!1.44e-15!42;CL:0000860!3.12e-15!45;CL:0000037!1.40e-09!172;CL:0000566!1.40e-09!172;CL:0002032!2.24e-09!165;CL:0000837!2.24e-09!165;CL:0000988!1.08e-08!182;CL:0000738!3.27e-07!140;CL:0002031!5.27e-07!124;CL:0002087!8.32e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000473;4.82e-11;39!CL:0000234;4.82e-11;39!CL:0000576;4.02e-10;48!CL:0000860;2.40e-09;33!CL:0002057;2.40e-09;33!CL:0000766;1.07e-08;69!CL:0002393;8.17e-07;6!CL:0002397;8.17e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.11e-19,108;CL:0000049,1.11e-19,108;CL:0000557,6.25e-18,67;CL:0000839,3.34e-16,66;CL:0000473,1.05e-14,48;CL:0000234,1.05e-14,48;CL:0002194,1.19e-14,59;CL:0000576,1.19e-14,59;CL:0000040,1.19e-14,59;CL:0000559,1.19e-14,59;CL:0000766,1.69e-14,72;CL:0002009,4.77e-14,61;CL:0000860,8.84e-13,42;CL:0002057,8.84e-13,42;CL:0002032,3.97e-11,161;CL:0000837,3.97e-11,161;CL:0000037,2.08e-10,168;CL:0000988,1.44e-09,177;CL:0002031,4.73e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;2.32e-10;42!UBERON:0007297;1.33e-08;2!CL:0000049;2.43e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;5.33e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.68e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002405!1.08e-20!115;UBERON:0002371!3.09e-19!80;UBERON:0002193!5.35e-19!112;UBERON:0001474!4.23e-18!86;UBERON:0002390!1.08e-17!102;UBERON:0003061!1.08e-17!102;UBERON:0007023!9.83e-15!115;UBERON:0004765!1.40e-14!101;UBERON:0001434!1.40e-14!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;1.33e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.85e-15,76;UBERON:0001474,8.00e-14,82;UBERON:0002405,4.53e-13,93;UBERON:0004765,3.40e-12,90;UBERON:0002390,7.80e-11,98;UBERON:0003061,7.80e-11,98;UBERON:0002193,1.34e-10,108;UBERON:0001434,1.58e-10,100;UBERON:0000341,3.76e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.157421562627358,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0.587200878669695,2.21598163412751,2.4065333696417,2.60413044859022,0.671746422719773,0.647787332037959,1.54545340580512,0.581592955118259,0.377875943688809,0.727752183563449,0.929716147622738,1.6446715520873,1.23882548358041,0,1.0246428261164,0.236482229888585,0,1.29096936716765,0,0.376484679085209,0.545812300115692,0.674170453335254,0,0,0,0.329851300186716,1.99463657621632,0.426224750532694,2.03146467040009,0.56738522469114,2.4912889959823,1.00499466102697,1.0429658368404,0.434377689410233,0,0,0.632924774881769,0.211255286311942,0.425208599930087,0.209658645508376,1.34794357375794,0.750884464207532,0.16072558669708,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,1.05353633910031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.327447688744282,0,0,0.649094787309367,0.174129737299267,0.531831842075461,0,0,0,0,0,0,0,0,0,0,1.55050055501597,0.35576626268671,0,0,0,0,0,0,0.17859945656816,0.44905874525234,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,1.77236972004421,0,0.245976877086227,0,0,0,0,0,0,0,0,0.231860809950154,0,0.433099343283221,0.925971025153221,0.570762456703795,0,0,1.47730203652438,0.468008530278475,0.445893486866185,0,0,0,0,0.290633938513962,0,0,0.264145302039678,1.24396869324463,1.29707958075265,0.37872730027914,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,1.50677127429638,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,1.27587750330633,0.749007023947182,0,0,0,0,0,0,0,0.157702415033935,0.35142424497814,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0.495056999523528,0,0,0,0,0.308097234229289,0,0.137836572484531,0.322260734604821,0.145016693914229,0,0,0.165284915360978,0,1.27612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0,0,0,0,0,0,0,0,0,0,0,0,0,0.635020748171649,6.16781686521655,2.24637742490767,1.36940807419915,0.47003968731907,17.5444133963047,0,0,0.80719882876419,5.96184732766457,1.71752672377882,1.84344458585075,0.223676107892416,0.166849141711909,0.586164286206121,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0.398495976502139,0,0.251932747854276,0,0.492339221844278,0,0,0,1.53471711068062,0,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.438770794307945,0,0,0.307801034015188,0.227884111694002,0,0,0.217294743844016,0,0,0,0,0,0.332423363800313,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0.216388639742091,0,0.265372693510018,0.611030144933625,0.296521128680622,0,0.208843899010911,0.202203398942031,1.60515529459758,0.234264445725339,0,0,0,0,3.62972148145992,0.30607276163049,0.695052375913368,0,0,0,0,0,0,0.569219092059585,0,0,0,0.0870592065804026,1.39781334593624,0,0,0.0730893170861856,0.0821154570532092,0.193978032976839,0,0.677942222341597,0,0,0.0633107959558787,0.391102765469606,0.0801588202515337,0.426905989478705,0,0.144090417154106,0,1.02956998717179,0,0.124252535565433,0,0,0,0,0,0,0.136905378891993,2.55493176133945,0.859530882839914,0,0.279282401272254,0.916641696046735,3.58936512288407,0.199679000498991,0.429226048136571,0,0.0671834724867263,0,6.98975697164723,0.393915911536118,0.247247575143499,0.13480708770837,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0.157611414598396,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.904980694530854,0.13223260174269,0.171086837884329,0,0.106787412567695,0,1.65695622138878,0,0,0,0,0.544017803369474,0.2506898940227,0.919036730290385,0,0.314108192500469,0,0.244052529803926,0.500763722825999,0.573409195690071,0.221858103073705,0.248385611765534,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0.554805861502613,0,0,0.889811221596536,0,0,0,0,0,0.899606224327209,0.155262956876259,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0.438568099157414,0,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,1.72041036127604,0,0,2.98736843143594,0,0,0.184105950251841,0,0,0.127894371303652,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.321146125482298,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0.183428598521679,0,0.381382095467167,0,0,0.225630985047772,0.20170506870352,0.781514011233092,0,0,0,0.135075169236789,0.781078098613847,0.2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| |||
|short_description=p@chr10:77273938..77273947,+ | |||
}} |
Revision as of 03:36, 11 January 2014
Short description: | p@chr10:77273938..77273947, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:77273938..77273947, + |
Coexpression cluster: | C3048_acute_Hepatocyte_duodenum_CD14_hepatoblastoma_myelodysplastic_thyroid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.11e-19 | 108 |
common myeloid progenitor | 1.11e-19 | 108 |
granulocyte monocyte progenitor cell | 6.25e-18 | 67 |
myeloid lineage restricted progenitor cell | 3.34e-16 | 66 |
defensive cell | 1.05e-14 | 48 |
phagocyte | 1.05e-14 | 48 |
monopoietic cell | 1.19e-14 | 59 |
monocyte | 1.19e-14 | 59 |
monoblast | 1.19e-14 | 59 |
promonocyte | 1.19e-14 | 59 |
myeloid leukocyte | 1.69e-14 | 72 |
macrophage dendritic cell progenitor | 4.77e-14 | 61 |
classical monocyte | 8.84e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.84e-13 | 42 |
hematopoietic oligopotent progenitor cell | 3.97e-11 | 161 |
hematopoietic multipotent progenitor cell | 3.97e-11 | 161 |
hematopoietic stem cell | 2.08e-10 | 168 |
hematopoietic cell | 1.44e-09 | 177 |
hematopoietic lineage restricted progenitor cell | 4.73e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.85e-15 | 76 |
bone element | 8.00e-14 | 82 |
immune system | 4.53e-13 | 93 |
skeletal element | 3.40e-12 | 90 |
hematopoietic system | 7.80e-11 | 98 |
blood island | 7.80e-11 | 98 |
hemolymphoid system | 1.34e-10 | 108 |
skeletal system | 1.58e-10 | 100 |
throat | 3.76e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.68e-07 | 31 |