FFCP PHASE1:Hg19::chr10:126432932..126432958,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9679 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28968 | |||
|TSSclassifier=strong | |||
|UniProt=Q14153 | |||
|association_with_transcript=-2bp_to_NM_014661,uc001lhv.1,uc001lhw.2_5end | |||
|coexpression_cluster_id=C2985 | |||
|description=CAGE_peak_2_at_FAM53B_5end | |||
|id=chr10:126432932..126432958,- | |||
|ontology_enrichment_celltype=CL:0000037!3.11e-22!172;CL:0000566!3.11e-22!172;CL:0000738!9.84e-21!140;CL:0000988!4.22e-20!182;CL:0002032!8.99e-20!165;CL:0000837!8.99e-20!165;CL:0002031!3.50e-15!124;CL:0002087!4.29e-15!119;CL:0000838!1.46e-12!52;CL:0000542!2.02e-12!53;CL:0000051!2.02e-12!53;CL:0000763!9.11e-09!112;CL:0000049!9.11e-09!112;CL:0000766!7.33e-07!76;CL:0000945!7.68e-07!24;CL:0000826!7.68e-07!24;CL:0000236!8.03e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000542;2.93e-08;53!CL:0000236;9.83e-08;13!CL:0000945;8.29e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.69e-23,168;CL:0000738,5.79e-22,136;CL:0000988,4.07e-21,177;CL:0002032,1.28e-20,161;CL:0000837,1.28e-20,161;CL:0002031,3.49e-16,120;CL:0002087,4.14e-16,115;CL:0000838,6.17e-13,52;CL:0000542,8.66e-13,53;CL:0000051,8.66e-13,53;CL:0000763,3.80e-09,108;CL:0000049,3.80e-09,108;CL:0000766,2.04e-07,72;CL:0000945,6.09e-07,24;CL:0000826,6.09e-07,24;CL:0000236,6.37e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;2.93e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.21e-27!115;UBERON:0001049!1.17e-12!57;UBERON:0005068!1.17e-12!57;UBERON:0006241!1.17e-12!57;UBERON:0007135!1.17e-12!57;UBERON:0002020!9.91e-11!34;UBERON:0003528!9.91e-11!34;UBERON:0001893!1.44e-10!34;UBERON:0002791!2.19e-10!33;UBERON:0003080!6.82e-10!42;UBERON:0002780!1.37e-09!41;UBERON:0001890!1.37e-09!41;UBERON:0006240!1.37e-09!41;UBERON:0001869!1.65e-09!32;UBERON:0002616!3.91e-09!59;UBERON:0005743!5.58e-09!86;UBERON:0001017!9.31e-09!82;UBERON:0002619!8.13e-08!22;UBERON:0000073!1.56e-07!94;UBERON:0001016!1.56e-07!94;UBERON:0000956!1.87e-07!25;UBERON:0000203!1.87e-07!25;UBERON:0002390!2.41e-07!102;UBERON:0003061!2.41e-07!102;UBERON:0001950!2.54e-07!20;UBERON:0000955!3.58e-07!69;UBERON:0006238!3.58e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.34e-09;34!UBERON:0002020;2.34e-09;34!UBERON:0001893;2.90e-09;34!UBERON:0002791;5.03e-09;32!UBERON:0001869;8.93e-09;32!UBERON:0002619;6.49e-08;22!UBERON:0007023;1.18e-07;114!UBERON:0002780;1.38e-07;41!UBERON:0001890;1.38e-07;41!UBERON:0000956;1.63e-07;25!UBERON:0000203;1.63e-07;25!UBERON:0001950;1.70e-07;20!UBERON:0000073;6.65e-07;53!UBERON:0002616;6.65e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.29e-27,114;UBERON:0001049,1.14e-12,56;UBERON:0005068,1.14e-12,56;UBERON:0006241,1.14e-12,56;UBERON:0007135,1.14e-12,56;UBERON:0000073,1.49e-11,53;UBERON:0002616,1.49e-11,53;UBERON:0003528,6.64e-11,34;UBERON:0002020,6.64e-11,34;UBERON:0001893,9.72e-11,34;UBERON:0002791,5.25e-10,32;UBERON:0002780,6.74e-10,41;UBERON:0001890,6.74e-10,41;UBERON:0003080,6.74e-10,41;UBERON:0006240,6.74e-10,41;UBERON:0001869,1.16e-09,32;UBERON:0001017,1.15e-08,81;UBERON:0002619,6.17e-08,22;UBERON:0002390,9.08e-08,98;UBERON:0003061,9.08e-08,98;UBERON:0000956,1.45e-07,25;UBERON:0000203,1.45e-07,25;UBERON:0001950,1.97e-07,20;UBERON:0003075,2.33e-07,82;UBERON:0007284,2.33e-07,82;UBERON:0001016,4.45e-07,89;UBERON:0000955,4.66e-07,68;UBERON:0006238,4.66e-07,68;UBERON:0002346,6.87e-07,86 | |||
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| |||
|short_description=p2@FAM53B | |||
}} |
Revision as of 05:28, 11 January 2014
Short description: | p2@FAM53B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FAM53B_5end |
Coexpression cluster: | C2985_Melanocyte_CD19_Natural_Dendritic_CD8_thalamus_blood |
Association with transcript: | -2bp_to_NM_014661, uc001lhv.1, uc001lhw.2_5end |
EntrezGene: | FAM53B |
HGNC: | 28968 |
UniProt: | Q14153 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.69e-23 | 168 |
leukocyte | 5.79e-22 | 136 |
hematopoietic cell | 4.07e-21 | 177 |
hematopoietic oligopotent progenitor cell | 1.28e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.28e-20 | 161 |
hematopoietic lineage restricted progenitor cell | 3.49e-16 | 120 |
nongranular leukocyte | 4.14e-16 | 115 |
lymphoid lineage restricted progenitor cell | 6.17e-13 | 52 |
lymphocyte | 8.66e-13 | 53 |
common lymphoid progenitor | 8.66e-13 | 53 |
myeloid cell | 3.80e-09 | 108 |
common myeloid progenitor | 3.80e-09 | 108 |
myeloid leukocyte | 2.04e-07 | 72 |
lymphocyte of B lineage | 6.09e-07 | 24 |
pro-B cell | 6.09e-07 | 24 |
B cell | 6.37e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.29e-27 | 114 |
neural tube | 1.14e-12 | 56 |
neural rod | 1.14e-12 | 56 |
future spinal cord | 1.14e-12 | 56 |
neural keel | 1.14e-12 | 56 |
regional part of nervous system | 1.49e-11 | 53 |
regional part of brain | 1.49e-11 | 53 |
brain grey matter | 6.64e-11 | 34 |
gray matter | 6.64e-11 | 34 |
telencephalon | 9.72e-11 | 34 |
regional part of telencephalon | 5.25e-10 | 32 |
regional part of forebrain | 6.74e-10 | 41 |
forebrain | 6.74e-10 | 41 |
anterior neural tube | 6.74e-10 | 41 |
future forebrain | 6.74e-10 | 41 |
cerebral hemisphere | 1.16e-09 | 32 |
central nervous system | 1.15e-08 | 81 |
regional part of cerebral cortex | 6.17e-08 | 22 |
hematopoietic system | 9.08e-08 | 98 |
blood island | 9.08e-08 | 98 |
cerebral cortex | 1.45e-07 | 25 |
pallium | 1.45e-07 | 25 |
neocortex | 1.97e-07 | 20 |
neural plate | 2.33e-07 | 82 |
presumptive neural plate | 2.33e-07 | 82 |
nervous system | 4.45e-07 | 89 |
brain | 4.66e-07 | 68 |
future brain | 4.66e-07 | 68 |
neurectoderm | 6.87e-07 | 86 |