FFCP PHASE1:Hg19::chr10:118033119..118033132,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2674 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4243 | |||
|TSSclassifier=strong | |||
|UniProt=P56159 | |||
|association_with_transcript=0bp_to_ENST00000439649,NM_005264,uc001lcj.2,uc009xyr.2_5end | |||
|description=CAGE_peak_10_at_GFRA1_5end | |||
|id=chr10:118033119..118033132,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000077;9.54e-10;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.04e-09,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;1.36e-10;4!DOID:1612;1.36e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.37e-10,4;DOID:1612,1.37e-10,4 | |||
|ontology_enrichment_uberon=UBERON:0000955!1.58e-27!69;UBERON:0006238!1.58e-27!69;UBERON:0001049!5.51e-27!57;UBERON:0005068!5.51e-27!57;UBERON:0006241!5.51e-27!57;UBERON:0007135!5.51e-27!57;UBERON:0003075!9.77e-27!86;UBERON:0007284!9.77e-27!86;UBERON:0005743!1.10e-26!86;UBERON:0001017!1.41e-26!82;UBERON:0000073!1.54e-25!94;UBERON:0001016!1.54e-25!94;UBERON:0002616!1.89e-25!59;UBERON:0002346!1.33e-24!90;UBERON:0003056!1.49e-24!61;UBERON:0003080!1.04e-23!42;UBERON:0002780!6.30e-23!41;UBERON:0001890!6.30e-23!41;UBERON:0006240!6.30e-23!41;UBERON:0000033!2.04e-20!123;UBERON:0001893!3.39e-20!34;UBERON:0000153!3.84e-20!129;UBERON:0007811!3.84e-20!129;UBERON:0002791!1.33e-19!33;UBERON:0001869!3.49e-19!32;UBERON:0007023!4.90e-19!115;UBERON:0002020!8.39e-19!34;UBERON:0003528!8.39e-19!34;UBERON:0004121!6.64e-16!169;UBERON:0000475!3.79e-15!365;UBERON:0000924!5.51e-15!173;UBERON:0006601!5.51e-15!173;UBERON:0000956!4.64e-14!25;UBERON:0000203!4.64e-14!25;UBERON:0002619!4.32e-12!22;UBERON:0001950!1.36e-10!20;UBERON:0000481!2.10e-09!347;UBERON:0000483!6.65e-09!309;UBERON:0000064!8.52e-09!219;UBERON:0000119!1.45e-08!312;UBERON:0000468!1.82e-07!659;UBERON:0000062!3.08e-07!511;UBERON:0000477!3.72e-07!286;UBERON:0009663!8.01e-07!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0.783556884599516,0.245733936501509,0.697801167972428,0,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0.204000691244253,0.313454721478088,0.572471974262113,0.273748850145768,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,0.144846518960824,0,0,0.567208902984407,1.10864698731282,1.31752178539689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0,0,0.354668382198357,1.12135520028461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.538168907066586,1.06778694409284,0.211931901159562,0,0.103052529238439,0.515281080091258,1.30281799432113,0,0,0.504867548488229,0.736399189138395,0,0,0.302256294682921,0.339121184620975,0,0,0,0,0,0,0.518305275076852,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,0,0,1.18157981336281,0,0,0.857839051492628,0,0,0,0,0,0,1.44331342025273,1.507095264676,0.234817388471643,0.144366447761074,0,0,5.53143078571493,4.29243081047436,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0.12624243342638,0,0.763976851116555,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19812427745791,0,0,0.289562613335158,0,0.358121926479791,0,0,0,0,0.508189248444927,0,0,0.335032530668698,0,0,0,0,0.736148950314839,0,0,1.45579603071565,1.24900292158013,3.46945313074656,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0.34444334449382,0,0.262248829918848,0,0,0.784349769176855,0,0.211103257785751,0,0,0.647747748306418,1.54227252690289,0.812839312631559,1.50506932156456,0,0,0.447749509444357,0,0,0.512900250232778,0,0,0.206082023295445,0,0,0,0,0,0.096670718292122,0,0,0.275673144969061,0.214840489736547,0.145016693914229,0.0852266274161009,1.24644849905432,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.953150969619124,0,0,0,0,0.359744915166629,0.274537029736055,0.353437207037059,0,0,0,2.43816869544795,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47775344708365,0.658589785919804,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.597743964753209,0.276283915531148,0,0.818149460017238,0,0.933118762985422,0,0,0,0.394573622547734,0,6.66821940867821,0,0.371072392647405,1.99613798001194,4.42727193844896,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0.885741385813839,1.5677537021303,0,0.110579259931225,0.886642856860642,0.219385397153973,0,0,0.230850775511391,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,3.05515072466813,0,0.86494757262552,0.626531697032732,0.202203398942031,0,0.234264445725339,0,0,0,0,1.20990716048664,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.484945082442097,0,0.451961481561065,0,0,0.633107959558787,0,0,1.06726497369676,0,0,0,0,0,0,0,0.543616824294456,0.104602846312333,0.611989305817931,0,0.600420288709789,0.136905378891993,0,0,0,0.558564802544508,0.229160424011684,0,0,0.429226048136571,0.223171457441873,0.53746777989381,0,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0,0,0,0,0,0.546746009922222,0,0.0788057072991982,0.419636705079985,0,0.179287339332845,0,0,0,0,0.542999601753713,0,0,0,0,0.511164065356265,0,0.293104467356165,0,0.258565912723101,0,0,0,0,0.78602152549833,0,1.48849806543585,0,0,0,0,0,0,0,0,0.886068179966986,0.366078794705889,0.3755727921195,0,0.554645257684261,0.745156835296601,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0.400027764663154,0,0,0,0,0,3.13193150358254,2.94717703165954,1.15761237161917,6.60789102167462,0.358177682162975,0,1.09642024789354,0.883445729729405,0,0,1.28120759293973,0,1.82315973706429,0.414775308455192,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,2.55788742607303,0,0,0.109209638192014,0,0,0,0,0.954013051960256,0,0,2.1160556621441,2.7562092961788,0.706521476061055,0,0.798169295285756,0.615349092722265,0.252071696221718,0.622415272177961,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.405225507710368,0,0.206686796501184,0.634158101939068,0.546974809018219,0,0,0,0,0.535701835878287,0.336283722218824,1.21393120847326,0.227662191351298,0,0,0,0.339848664884159,0.789273282754189,0,0,0.39246546425257,1.25692471932802,0,10.9579046461139,0,0.47775168788705,0.428859265059938,0.790068058663633,0,0.869291361512897,0,0,0.3414369541879,1.38251932362818,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,2.4285549652957,0.935757853848423,0,0.356760272332706,0,0,0,0.308696632431779,0.874238242015829,0,0.245148321753905,0,0.196308467114945,0,8.0304588240846,0.339854229375634,0.187967835959707,0.3222894398678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| |||
|short_description=p10@GFRA1 | |||
}} |
Revision as of 05:08, 11 January 2014
Short description: | p10@GFRA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_GFRA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000439649, NM_005264, uc001lcj.2, uc009xyr.2_5end |
EntrezGene: | GFRA1 |
HGNC: | 4243 |
UniProt: | P56159 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.04e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.37e-10 | 4 |
breast cancer | 1.37e-10 | 4 |