FFCP PHASE1:Hg19::chr10:105615456..105615531,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9644 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23664 | |||
|TSSclassifier=strong | |||
|UniProt=Q5TCZ1 | |||
|association_with_transcript=-155bp_to_ENST00000369774_5end | |||
|coexpression_cluster_id=C2976 | |||
|description=CAGE_peak_3_at_SH3PXD2A_5end | |||
|id=chr10:105615456..105615531,- | |||
|ontology_enrichment_celltype=CL:0000220!1.67e-08!246;CL:0002321!1.90e-08!248 | |||
|ontology_enrichment_celltype_v019=CL:0002159;9.01e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,9.52e-08,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000924!3.40e-16!173;UBERON:0006601!3.40e-16!173;UBERON:0000468!9.54e-15!659;UBERON:0004121!1.04e-14!169;UBERON:0000475!3.15e-14!365;UBERON:0000467!3.15e-14!625;UBERON:0000480!6.44e-14!626;UBERON:0003102!3.00e-12!95;UBERON:0004111!1.29e-11!241;UBERON:0007023!3.04e-11!115;UBERON:0000922!1.17e-10!612;UBERON:0002050!3.79e-10!605;UBERON:0005423!3.79e-10!605;UBERON:0000923!7.30e-10!604;UBERON:0005291!7.30e-10!604;UBERON:0006598!7.30e-10!604;UBERON:0002532!7.30e-10!604;UBERON:0000483!7.46e-10!309;UBERON:0000033!1.06e-09!123;UBERON:0000119!1.66e-09!312;UBERON:0000153!1.73e-09!129;UBERON:0007811!1.73e-09!129;UBERON:0000481!9.94e-09!347;UBERON:0000165!5.40e-08!28;UBERON:0000930!5.40e-08!28;UBERON:0000166!9.66e-08!21;UBERON:0001049!1.19e-07!57;UBERON:0005068!1.19e-07!57;UBERON:0006241!1.19e-07!57;UBERON:0007135!1.19e-07!57;UBERON:0000477!1.40e-07!286;UBERON:0000025!2.57e-07!194;UBERON:0000073!3.16e-07!94;UBERON:0001016!3.16e-07!94;UBERON:0002097!5.27e-07!40;UBERON:0001017!5.73e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;3.01e-08;28!UBERON:0000161;2.91e-07;19!UBERON:0000166;2.91e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.92e-16,171;UBERON:0000924,6.92e-16,171;UBERON:0006601,6.92e-16,171;UBERON:0003102,6.44e-14,99;UBERON:0002050,3.98e-12,564;UBERON:0007023,6.62e-11,114;UBERON:0000923,8.39e-11,560;UBERON:0010316,8.39e-11,560;UBERON:0005291,8.39e-11,560;UBERON:0006598,8.39e-11,560;UBERON:0010317,8.39e-11,560;UBERON:0002532,8.39e-11,560;UBERON:0005423,1.88e-10,581;UBERON:0000922,2.34e-10,592;UBERON:0004111,5.86e-10,240;UBERON:0010371,6.76e-09,104;UBERON:0000483,7.82e-09,306;UBERON:0000119,2.38e-08,309;UBERON:0011216,2.76e-08,223;UBERON:0000165,5.42e-08,29;UBERON:0000930,5.42e-08,29;UBERON:0000166,1.13e-07,22;UBERON:0001049,2.27e-07,56;UBERON:0005068,2.27e-07,56;UBERON:0006241,2.27e-07,56;UBERON:0007135,2.27e-07,56;UBERON:0002097,3.23e-07,41;UBERON:0001016,4.41e-07,89;UBERON:0002199,5.97e-07,46;UBERON:0002416,5.97e-07,46;UBERON:0000073,9.00e-07,53;UBERON:0002616,9.00e-07,53 | |||
|phase1_expression=0.726713517082227,0.856402095563933,1.55049844505568,1.0007329835313,2.68176656656373,0,0,5.05375898741465,2.08948502559871,0.982935746006035,0.697801167972428,10.2667444901181,11.078213085595,2.84662611808107,1.98838425436749,3.36162573225888,2.41077811209591,3.65155045193687,2.92759679274304,1.35433163884467,2.24400760368678,5.01527554364941,2.28988789704845,3.14811177667634,1.12988375635323,0,0,0.0787107813136792,0,0,0.154816123316076,21.1466881630153,38.554357603616,21.4457325896737,0,0,0.293600439334847,0,0,0,20.600223630073,20.0814072931767,13.1363539493435,0,0,0.485168122375632,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0.790152254325231,0.786839080455332,1.17903228824749,0.822405995998037,0,0,0,0,1.00269411196656,1.76763544484902,2.21533894583621,1.89562704635511,1.15282187753108,0.780356085359269,0.164437904603676,0.552700035571697,0,0,0,0,0.793165398882963,0.383220493601921,0.34362744548263,0.506039384039006,0,0,0,0,0,0,0,0.821127996921047,0,0,0,4.87613732627923,2.68280343881454,1.15076305659177,1.0843174571537,6.51739283826656,1.44846518960824,11.1340032587154,11.6792368872633,1.22895262313288,0.443458794925128,0.966182642624386,4.25681995367566,31.6936900814512,24.8425576665568,4.54366351116557,4.35324343248168,7.04677190749985,0,0,0.371457501329565,2.18638648103376,4.30117297553062,3.12426451446835,3.95715559346807,1.67799774483962,4.40188867104108,4.80688423034664,10.5950871259425,3.91342888955381,5.35552980423472,3.22263453687318,3.80136052859256,2.92874469057803,2.94130464276695,1.62028389576352,4.37568668591991,5.38870494302808,4.61707069981621,10.7321646226118,7.59412527654503,7.69447324507711,0,0,24.8573609721245,0,1.01304409331664,2.64818361626438,5.16305917347865,1.77334191099179,0,1.06748995729705,0.49333509683432,2.17847724779836,2.42479209725439,2.12500474047496,1.96764655938411,2.30470369792,2.10889288650417,3.43376084513353,4.56377457235559,1.79338416662161,5.63685593490071,8.41739310714284,6.17983549489893,6.94124182266637,5.03620700978249,5.57959218349133,3.56400857184616,5.19260551484969,0,5.03032699271367,7.57512512793298,8.50805935129356,3.04770527032601,3.95079858792754,2.45190236639216,1.20190447125277,0.340296549480063,8.07253360599879,4.69826255400848,4.66250182551036,6.90209520994125,4.12210116953756,7.9868567414145,4.65292140828975,3.88185564154912,3.41029518064195,8.58274832429989,6.90374239817245,4.52608959092673,10.2952781829818,5.44061330429257,1.86516651541536,22.4182589669424,24.819896973766,23.2311722265093,2.07355300420312,2.38553582978673,2.09149097165133,3.83545903556871,1.26160425437814,0.36497735907583,14.0804579096834,12.8648187638577,20.7202382028721,3.25057549622385,10.8281922250438,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,11.0723318193697,8.41450642820675,2.4694440679884,4.41026134156626,1.26755034821831,4.91413608338813,8.86184860022106,0,0.737930631258681,0.514703430895577,42.6928610239553,30.3484733795573,32.5713870613684,16.8510970188524,2.28065813717227,0,0,0.811512834825538,0.469634776943287,0.866198686566443,2.31492756288305,0.761016608938393,0,0,4.67812311566055,3.7440682422278,2.82399208348584,27.1828118561653,17.3021592044825,15.4534855994201,17.2847948816497,21.5069114500332,40.2551813123472,0,0,0.414656231081544,0.432359860250884,0.12624243342638,2.28592419451809,11.4596527667483,10.5495702489042,10.2643467613623,6.88944201112268,6.9078903304101,7.71731368102561,0.784917590417525,1.74384027533312,0.51336800074665,2.32689088364,14.3062578340753,7.607724773004,0.797814349754612,0,2.31486636835928,1.41849132023278,2.93064396917709,0.428933980974443,4.88359444852299,3.29296134712308,5.5375151329935,0,1.58390374586686,2.41151501647669,1.74306691720059,1.79951384127703,0,8.53837055434615,0,0,0,5.70547620162874,1.44781306667579,5.54786070886035,4.47652408099739,0,0,0,0.256686072559497,1.52456774533478,3.90419561572865,8.50617694055465,7.70574820538004,5.10351001322531,0,0,0,1.96306386750624,3.50119364741774,1.62759014219841,0.207970861530807,0.178428988797162,0.315404830067869,0.468565659970853,8.42649079237613,9.09630016223939,2.0694614258501,1.99267679560631,3.13427586520895,5.82120216936155,11.356467132839,11.6668764095691,0.82707210449155,0,0,1.81876542867756,3.32870879020994,6.65258645325297,0.744323423456331,0.306923946576125,0.841980283299221,1.53766979106841,0.511707249066704,1.76939313257968,0,5.85996836450091,4.6166048581413,6.15953670103569,9.8658341544888,4.06736324609857,1.57117284469109,19.0481146788121,15.4696061412306,1.14814448164607,1.45672934405374,1.70461739447251,2.70719767744447,1.46329140498388,0,1.46139224653261,0.949964660035881,1.13733384070897,6.29346709523108,2.59099099322567,4.62681758070868,0.270946437543853,0,1.52925763827023,0.831076008928724,2.68649705666614,0,0,0.256450125116389,0.328014645699706,0,11.6436343161926,1.92295876118521,2.64030399745882,29.287542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| |||
|short_description=p3@SH3PXD2A | |||
}} |
Revision as of 04:49, 11 January 2014
Short description: | p3@SH3PXD2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SH3PXD2A_5end |
Coexpression cluster: | C2976_Small_Gingival_Urothelial_keratoacanthoma_Keratinocyte_neuroectodermal_Bronchial |
Association with transcript: | -155bp_to_ENST00000369774_5end |
EntrezGene: | SH3PXD2A |
HGNC: | 23664 |
UniProt: | Q5TCZ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 9.52e-08 | 250 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 6.92e-16 | 171 |
ectoderm | 6.92e-16 | 171 |
presumptive ectoderm | 6.92e-16 | 171 |
surface structure | 6.44e-14 | 99 |
embryonic structure | 3.98e-12 | 564 |
adult organism | 6.62e-11 | 114 |
germ layer | 8.39e-11 | 560 |
germ layer / neural crest | 8.39e-11 | 560 |
embryonic tissue | 8.39e-11 | 560 |
presumptive structure | 8.39e-11 | 560 |
germ layer / neural crest derived structure | 8.39e-11 | 560 |
epiblast (generic) | 8.39e-11 | 560 |
developing anatomical structure | 1.88e-10 | 581 |
embryo | 2.34e-10 | 592 |
anatomical conduit | 5.86e-10 | 240 |
ecto-epithelium | 6.76e-09 | 104 |
epithelium | 7.82e-09 | 306 |
cell layer | 2.38e-08 | 309 |
organ system subdivision | 2.76e-08 | 223 |
mouth | 5.42e-08 | 29 |
stomodeum | 5.42e-08 | 29 |
oral opening | 1.13e-07 | 22 |
neural tube | 2.27e-07 | 56 |
neural rod | 2.27e-07 | 56 |
future spinal cord | 2.27e-07 | 56 |
neural keel | 2.27e-07 | 56 |
skin of body | 3.23e-07 | 41 |
nervous system | 4.41e-07 | 89 |
integument | 5.97e-07 | 46 |
integumental system | 5.97e-07 | 46 |
regional part of nervous system | 9.00e-07 | 53 |
regional part of brain | 9.00e-07 | 53 |