FFCP PHASE1:Hg19::chr10:104474088..104474105,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=403 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=694 | |||
|TSSclassifier=strong | |||
|UniProt=P36405 | |||
|association_with_transcript=58bp_to_ENST00000260746_5end | |||
|description=CAGE_peak_2_at_ARL3_5end | |||
|id=chr10:104474088..104474105,- | |||
|ontology_enrichment_celltype=CL:0000055!3.32e-20!180;CL:0000393!3.34e-12!60;CL:0000211!3.34e-12!60;CL:0000183!2.13e-11!59;CL:0000680!5.05e-11!57;CL:0000056!5.05e-11!57;CL:0000355!5.05e-11!57;CL:0000187!1.88e-10!54;CL:0000192!3.65e-09!42;CL:0000514!3.65e-09!42;CL:0000057!1.24e-07!75;CL:0002321!1.89e-07!248;CL:0000220!3.95e-07!246;CL:0000359!5.84e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000192;5.81e-07;43!CL:0000393;6.75e-07;61!CL:0000211;6.75e-07;61!CL:0000187;7.12e-07;55!CL:0000359;8.47e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,1.49e-12,61;CL:0000211,1.49e-12,61;CL:0000680,2.29e-11,58;CL:0000056,2.29e-11,58;CL:0000355,2.29e-11,58;CL:0000187,8.55e-11,55;CL:0000192,1.65e-09,43;CL:0000514,1.65e-09,43;CL:0000057,5.62e-08,76;CL:0002321,6.48e-08,250;CL:0000359,5.81e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;5.81e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!7.55e-24!365;UBERON:0000119!1.13e-19!312;UBERON:0000483!2.74e-19!309;UBERON:0000481!5.56e-17!347;UBERON:0000033!6.43e-17!123;UBERON:0000073!5.40e-16!94;UBERON:0001016!5.40e-16!94;UBERON:0005743!1.27e-15!86;UBERON:0001017!1.73e-15!82;UBERON:0000153!1.76e-15!129;UBERON:0007811!1.76e-15!129;UBERON:0002346!2.32e-15!90;UBERON:0003056!6.41e-15!61;UBERON:0000924!6.48e-15!173;UBERON:0006601!6.48e-15!173;UBERON:0003075!8.30e-15!86;UBERON:0007284!8.30e-15!86;UBERON:0004121!2.48e-14!169;UBERON:0000477!1.27e-13!286;UBERON:0002616!1.35e-13!59;UBERON:0000955!2.21e-13!69;UBERON:0006238!2.21e-13!69;UBERON:0000914!6.25e-13!83;UBERON:0002329!6.25e-13!83;UBERON:0003077!6.25e-13!83;UBERON:0003059!6.25e-13!83;UBERON:0007282!6.25e-13!83;UBERON:0009618!6.25e-13!83;UBERON:0007285!6.25e-13!83;UBERON:0000025!1.44e-12!194;UBERON:0001049!2.59e-12!57;UBERON:0005068!2.59e-12!57;UBERON:0006241!2.59e-12!57;UBERON:0007135!2.59e-12!57;UBERON:0002780!7.47e-12!41;UBERON:0001890!7.47e-12!41;UBERON:0006240!7.47e-12!41;UBERON:0004111!8.41e-12!241;UBERON:0000468!1.12e-11!659;UBERON:0003080!2.80e-11!42;UBERON:0005256!1.07e-10!143;UBERON:0004290!2.37e-10!70;UBERON:0000922!2.91e-10!612;UBERON:0001869!1.51e-09!32;UBERON:0000480!1.58e-09!626;UBERON:0001134!1.74e-09!61;UBERON:0002036!1.74e-09!61;UBERON:0003082!1.74e-09!61;UBERON:0000486!1.94e-09!82;UBERON:0000467!2.57e-09!625;UBERON:0002020!4.28e-09!34;UBERON:0003528!4.28e-09!34;UBERON:0002100!5.80e-09!216;UBERON:0001893!6.02e-09!34;UBERON:0002050!6.03e-09!605;UBERON:0005423!6.03e-09!605;UBERON:0000923!6.67e-09!604;UBERON:0005291!6.67e-09!604;UBERON:0006598!6.67e-09!604;UBERON:0002532!6.67e-09!604;UBERON:0002791!1.04e-08!33;UBERON:0002385!1.98e-08!63;UBERON:0001015!1.98e-08!63;UBERON:0000383!1.98e-08!63;UBERON:0000064!2.53e-08!219;UBERON:0000956!2.10e-07!25;UBERON:0000203!2.10e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;9.02e-09;32!UBERON:0002780;1.58e-08;41!UBERON:0001890;1.58e-08;41!UBERON:0003528;2.93e-08;34!UBERON:0002020;2.93e-08;34!UBERON:0002791;3.34e-08;32!UBERON:0001893;4.46e-08;34!UBERON:0000073;2.64e-07;53!UBERON:0002616;2.64e-07;53!UBERON:0000956;3.05e-07;25!UBERON:0000203;3.05e-07;25!UBERON:0000955;6.58e-07;68 | |||
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| |||
|short_description=p2@ARL3 | |||
}} |
Revision as of 04:44, 11 January 2014
Short description: | p2@ARL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARL3_5end |
Coexpression cluster: | NA |
Association with transcript: | 58bp_to_ENST00000260746_5end |
EntrezGene: | ARL3 |
HGNC: | 694 |
UniProt: | P36405 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 1.49e-12 | 61 |
electrically active cell | 1.49e-12 | 61 |
muscle precursor cell | 2.29e-11 | 58 |
myoblast | 2.29e-11 | 58 |
multi-potent skeletal muscle stem cell | 2.29e-11 | 58 |
muscle cell | 8.55e-11 | 55 |
smooth muscle cell | 1.65e-09 | 43 |
smooth muscle myoblast | 1.65e-09 | 43 |
fibroblast | 5.62e-08 | 76 |
embryonic cell | 6.48e-08 | 250 |
vascular associated smooth muscle cell | 5.81e-07 | 32 |