FFCP PHASE1:Hg19::chrX:135849963..135849985,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9459|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=685|TSSclassifier=W|UniProt=|association_with_transcript=-304bp_to_uc011mwd.1,uc011mwe.1_5end|description=CAGE_peak_8_at_ARHGEF6_5end|id=chrX:135849963..135849985,-|ontology_enrichment_celltype=CL:0000763!5.89e-31!112;CL:0000049!5.89e-31!112;CL:0000766!7.15e-31!76;CL:0000037!9.75e-31!172;CL:0000566!9.75e-31!172;CL:0000557!1.16e-30!71;CL:0000738!2.77e-29!140;CL:0002032!3.75e-28!165;CL:0000837!3.75e-28!165;CL:0000988!9.35e-28!182;CL:0000839!4.02e-27!70;CL:0002009!2.45e-26!65;CL:0002194!2.28e-25!63;CL:0000576!2.28e-25!63;CL:0000040!2.28e-25!63;CL:0000559!2.28e-25!63;CL:0002031!7.84e-23!124;CL:0002087!1.04e-21!119;CL:0002057!7.16e-21!42;CL:0000860!5.39e-18!45;CL:0000134!2.52e-07!358;CL:0002393!2.54e-07!9;CL:0002397!2.54e-07!9;CL:0002320!4.54e-07!365|ontology_enrichment_celltype_v019=CL:0000766;1.67e-20;69!CL:0000576;2.23e-20;48!CL:0000473;2.66e-15;39!CL:0000234;2.66e-15;39!CL:0000860;2.58e-14;33!CL:0002057;2.58e-14;33!CL:0000763;3.19e-14;100!CL:0000738;9.86e-12;136!CL:0002087;8.95e-11;104!CL:0000451;1.36e-10;10!CL:0002393;9.74e-09;6!CL:0002397;9.74e-09;6!CL:0000097;1.90e-08;5!CL:0000990;2.11e-08;8!CL:0000236;5.16e-08;13!CL:0000840;5.34e-08;5!CL:0000988;4.84e-07;177|ontology_enrichment_celltype_v019_2=CL:0000766,7.94e-50,72;CL:0000037,9.45e-50,168;CL:0000557,2.03e-49,67;CL:0000738,2.27e-49,136;CL:0000763,5.58e-47,108;CL:0000049,5.58e-47,108;CL:0000988,6.34e-47,177;CL:0002032,1.83e-44,161;CL:0000837,1.83e-44,161;CL:0000839,3.67e-44,66;CL:0002009,3.43e-41,61;CL:0002031,1.81e-39,120;CL:0002194,2.48e-39,59;CL:0000576,2.48e-39,59;CL:0000040,2.48e-39,59;CL:0000559,2.48e-39,59;CL:0002087,2.60e-35,115;CL:0000473,4.95e-30,48;CL:0000234,4.95e-30,48;CL:0000860,1.67e-26,42;CL:0002057,1.67e-26,42;CL:0002393,6.75e-13,9;CL:0002397,6.75e-13,9;CL:0000134,7.97e-13,354;CL:0002320,4.45e-12,361;CL:0000219,4.85e-11,386;CL:0000451,1.40e-10,10;CL:0000097,1.07e-08,5;CL:0002028,1.07e-08,5;CL:0000990,2.97e-08,8;CL:0000840,4.02e-08,5;CL:0001029,4.02e-08,5;CL:0000236,2.12e-07,14;CL:0000034,4.81e-07,441;CL:0000048,6.88e-07,427|ontology_enrichment_development_v019=CL:0002057;1.09e-17;42!CL:0000049;2.94e-13;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.13e-28!102;UBERON:0003061!3.13e-28!102;UBERON:0002193!1.33e-26!112;UBERON:0002371!1.44e-24!80;UBERON:0001474!8.75e-24!86;UBERON:0007023!4.27e-21!115;UBERON:0004765!1.97e-19!101;UBERON:0001434!1.97e-19!101;UBERON:0002405!4.27e-16!115;UBERON:0001049!2.61e-10!57;UBERON:0005068!2.61e-10!57;UBERON:0006241!2.61e-10!57;UBERON:0007135!2.61e-10!57;UBERON:0003080!2.92e-09!42;UBERON:0002780!5.01e-09!41;UBERON:0001890!5.01e-09!41;UBERON:0006240!5.01e-09!41;UBERON:0002204!1.91e-08!167;UBERON:0001893!3.37e-08!34;UBERON:0002020!3.42e-08!34;UBERON:0003528!3.42e-08!34;UBERON:0002791!4.21e-08!33;UBERON:0002384!1.16e-07!375;UBERON:0001869!1.66e-07!32;UBERON:0002616!2.00e-07!59|ontology_enrichment_uberon_v019=UBERON:0000178;6.30e-09;15!UBERON:0000179;6.30e-09;15!UBERON:0000463;6.30e-09;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.46e-51,98;UBERON:0003061,1.46e-51,98;UBERON:0002193,8.53e-48,108;UBERON:0002371,2.55e-43,76;UBERON:0001474,2.64e-40,82;UBERON:0002405,2.95e-39,93;UBERON:0004765,4.67e-35,90;UBERON:0001434,1.05e-29,100;UBERON:0003081,5.92e-18,203;UBERON:0002384,1.58e-12,371;UBERON:0002204,3.14e-12,167;UBERON:0000178,6.20e-09,15;UBERON:0000179,6.20e-09,15;UBERON:0000463,6.20e-09,15;UBERON:0007023,1.19e-07,114|phase1_expression=0,0.428201047781966,0.281908808191942,0,0.446961094427288,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0.487932798790507,0,0,0.313454721478088,1.43117993565528,0.136874425072884,0.502170558379211,0.0764134057479513,0,0.0787107813136792,3.14691421479123,0.767658796194425,3.56077083626975,0,0,0,0.619737604642413,0.142169232487422,2.34880351467878,1.10799081706375,3.60980005446255,2.82114131930607,4.03047853631864,5.18229865630367,4.89393578504954,4.07115068582781,2.26725566213286,2.42584061187816,0.929716147622738,0.822335776043652,0.929119112685311,1.7261543539329,0.768482119587302,1.89185783910868,1.37898272294647,2.5819387343353,1.35426486594342,2.07066573496865,0.818718450173537,0.674170453335254,2.44867113896722,1.60464513538047,1.91801137739712,2.30895910130701,1.19678194572979,2.98357325372886,1.45104619314292,0,1.24564449799115,2.76373531782418,0.521482918420201,0.65156653411535,2.42159801053347,1.84138817993782,0.632924774881769,3.38008458099107,2.97646019951061,2.09658645508376,3.81917345898083,2.85336096398862,2.57160938715328,4.27519115611873,5.17183360717634,3.10529061399878,0,2.73069305631066,2.66852776159066,1.70692089026603,3.2031678962881,4.02326707968138,2.64417949113945,0,2.27685187643779,4.11066032559657,2.29363936875137,1.32171328579026,2.24203425192614,1.58030450865046,0.590129310341499,1.5720430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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9459 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=685 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-304bp_to_uc011mwd.1,uc011mwe.1_5end | |||
|description=CAGE_peak_8_at_ARHGEF6_5end | |||
|id=chrX:135849963..135849985,- | |||
|ontology_enrichment_celltype=CL:0000763!5.89e-31!112;CL:0000049!5.89e-31!112;CL:0000766!7.15e-31!76;CL:0000037!9.75e-31!172;CL:0000566!9.75e-31!172;CL:0000557!1.16e-30!71;CL:0000738!2.77e-29!140;CL:0002032!3.75e-28!165;CL:0000837!3.75e-28!165;CL:0000988!9.35e-28!182;CL:0000839!4.02e-27!70;CL:0002009!2.45e-26!65;CL:0002194!2.28e-25!63;CL:0000576!2.28e-25!63;CL:0000040!2.28e-25!63;CL:0000559!2.28e-25!63;CL:0002031!7.84e-23!124;CL:0002087!1.04e-21!119;CL:0002057!7.16e-21!42;CL:0000860!5.39e-18!45;CL:0000134!2.52e-07!358;CL:0002393!2.54e-07!9;CL:0002397!2.54e-07!9;CL:0002320!4.54e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000766;1.67e-20;69!CL:0000576;2.23e-20;48!CL:0000473;2.66e-15;39!CL:0000234;2.66e-15;39!CL:0000860;2.58e-14;33!CL:0002057;2.58e-14;33!CL:0000763;3.19e-14;100!CL:0000738;9.86e-12;136!CL:0002087;8.95e-11;104!CL:0000451;1.36e-10;10!CL:0002393;9.74e-09;6!CL:0002397;9.74e-09;6!CL:0000097;1.90e-08;5!CL:0000990;2.11e-08;8!CL:0000236;5.16e-08;13!CL:0000840;5.34e-08;5!CL:0000988;4.84e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.94e-50,72;CL:0000037,9.45e-50,168;CL:0000557,2.03e-49,67;CL:0000738,2.27e-49,136;CL:0000763,5.58e-47,108;CL:0000049,5.58e-47,108;CL:0000988,6.34e-47,177;CL:0002032,1.83e-44,161;CL:0000837,1.83e-44,161;CL:0000839,3.67e-44,66;CL:0002009,3.43e-41,61;CL:0002031,1.81e-39,120;CL:0002194,2.48e-39,59;CL:0000576,2.48e-39,59;CL:0000040,2.48e-39,59;CL:0000559,2.48e-39,59;CL:0002087,2.60e-35,115;CL:0000473,4.95e-30,48;CL:0000234,4.95e-30,48;CL:0000860,1.67e-26,42;CL:0002057,1.67e-26,42;CL:0002393,6.75e-13,9;CL:0002397,6.75e-13,9;CL:0000134,7.97e-13,354;CL:0002320,4.45e-12,361;CL:0000219,4.85e-11,386;CL:0000451,1.40e-10,10;CL:0000097,1.07e-08,5;CL:0002028,1.07e-08,5;CL:0000990,2.97e-08,8;CL:0000840,4.02e-08,5;CL:0001029,4.02e-08,5;CL:0000236,2.12e-07,14;CL:0000034,4.81e-07,441;CL:0000048,6.88e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;1.09e-17;42!CL:0000049;2.94e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.13e-28!102;UBERON:0003061!3.13e-28!102;UBERON:0002193!1.33e-26!112;UBERON:0002371!1.44e-24!80;UBERON:0001474!8.75e-24!86;UBERON:0007023!4.27e-21!115;UBERON:0004765!1.97e-19!101;UBERON:0001434!1.97e-19!101;UBERON:0002405!4.27e-16!115;UBERON:0001049!2.61e-10!57;UBERON:0005068!2.61e-10!57;UBERON:0006241!2.61e-10!57;UBERON:0007135!2.61e-10!57;UBERON:0003080!2.92e-09!42;UBERON:0002780!5.01e-09!41;UBERON:0001890!5.01e-09!41;UBERON:0006240!5.01e-09!41;UBERON:0002204!1.91e-08!167;UBERON:0001893!3.37e-08!34;UBERON:0002020!3.42e-08!34;UBERON:0003528!3.42e-08!34;UBERON:0002791!4.21e-08!33;UBERON:0002384!1.16e-07!375;UBERON:0001869!1.66e-07!32;UBERON:0002616!2.00e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.30e-09;15!UBERON:0000179;6.30e-09;15!UBERON:0000463;6.30e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.46e-51,98;UBERON:0003061,1.46e-51,98;UBERON:0002193,8.53e-48,108;UBERON:0002371,2.55e-43,76;UBERON:0001474,2.64e-40,82;UBERON:0002405,2.95e-39,93;UBERON:0004765,4.67e-35,90;UBERON:0001434,1.05e-29,100;UBERON:0003081,5.92e-18,203;UBERON:0002384,1.58e-12,371;UBERON:0002204,3.14e-12,167;UBERON:0000178,6.20e-09,15;UBERON:0000179,6.20e-09,15;UBERON:0000463,6.20e-09,15;UBERON:0007023,1.19e-07,114 | |||
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| |||
|short_description=p8@ARHGEF6 | |||
}} |
Revision as of 10:53, 14 September 2013
Short description: | p8@ARHGEF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_ARHGEF6_5end |
Coexpression cluster: | NA |
Association with transcript: | -304bp_to_uc011mwd.1, uc011mwe.1_5end |
EntrezGene: | ARHGEF6 |
HGNC: | 685 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.46e-51 | 98 |
blood island | 1.46e-51 | 98 |
hemolymphoid system | 8.53e-48 | 108 |
bone marrow | 2.55e-43 | 76 |
bone element | 2.64e-40 | 82 |
immune system | 2.95e-39 | 93 |
skeletal element | 4.67e-35 | 90 |
skeletal system | 1.05e-29 | 100 |
lateral plate mesoderm | 5.92e-18 | 203 |
connective tissue | 1.58e-12 | 371 |
musculoskeletal system | 3.14e-12 | 167 |
blood | 6.20e-09 | 15 |
haemolymphatic fluid | 6.20e-09 | 15 |
organism substance | 6.20e-09 | 15 |
adult organism | 1.19e-07 | 114 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.