FFCP PHASE1:Hg19::chrX:102000893..102000918,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=80823|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29353|TSSclassifier=S|UniProt=Q6PI77|association_with_transcript=0bp_to_ENST00000447531,ENST00000448867,NM_001142529,NM_001142530,uc011mru.1,uc011mrv.1_5end|description=CAGE_peak_4_at_BHLHB9_5end|id=chrX:102000893..102000918,+|ontology_enrichment_celltype=CL:0000047!1.20e-09!8;CL:0000540!1.43e-07!6;CL:0000031!1.43e-07!6;CL:0000404!1.43e-07!6;CL:0002322!6.27e-07!5|ontology_enrichment_celltype_v019=CL:0000540;2.44e-16;6!CL:0000404;2.44e-16;6!CL:0002322;1.27e-14;5!CL:0002321;1.61e-08;15!CL:0002319;2.46e-08;25!CL:0000047;7.74e-07;2|ontology_enrichment_celltype_v019_2=CL:0000047,1.60e-21,8;CL:0000540,2.09e-16,6;CL:0000031,2.09e-16,6;CL:0000404,2.09e-16,6;CL:0002322,7.96e-15,5;CL:0002319,2.44e-08,25;CL:0000133,8.17e-07,59|ontology_enrichment_development_v019=CL:0000031;2.44e-16;6!UBERON:0006601;6.01e-11;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.14e-48!82;UBERON:0005743!1.04e-46!86;UBERON:0000073!1.65e-44!94;UBERON:0001016!1.65e-44!94;UBERON:0001049!2.60e-42!57;UBERON:0005068!2.60e-42!57;UBERON:0006241!2.60e-42!57;UBERON:0007135!2.60e-42!57;UBERON:0002616!4.41e-39!59;UBERON:0000955!3.05e-36!69;UBERON:0006238!3.05e-36!69;UBERON:0002346!4.72e-36!90;UBERON:0003075!2.45e-35!86;UBERON:0007284!2.45e-35!86;UBERON:0002780!2.88e-35!41;UBERON:0001890!2.88e-35!41;UBERON:0006240!2.88e-35!41;UBERON:0003080!4.69e-34!42;UBERON:0007023!6.56e-31!115;UBERON:0001893!1.29e-30!34;UBERON:0002020!1.62e-30!34;UBERON:0003528!1.62e-30!34;UBERON:0002791!1.61e-29!33;UBERON:0001869!2.70e-29!32;UBERON:0000924!7.57e-28!173;UBERON:0006601!7.57e-28!173;UBERON:0003056!1.98e-27!61;UBERON:0004121!6.20e-27!169;UBERON:0000153!2.71e-24!129;UBERON:0007811!2.71e-24!129;UBERON:0000033!8.80e-24!123;UBERON:0000956!1.22e-22!25;UBERON:0000203!1.22e-22!25;UBERON:0002619!6.29e-20!22;UBERON:0001950!1.87e-18!20;UBERON:0000468!3.10e-11!659;UBERON:0000922!1.51e-10!612;UBERON:0000477!2.22e-10!286;UBERON:0000025!9.33e-10!194;UBERON:0000475!1.85e-09!365;UBERON:0003076!2.22e-09!15;UBERON:0003057!2.22e-09!15;UBERON:0000119!2.36e-09!312;UBERON:0000483!2.37e-09!309;UBERON:0002308!2.83e-09!9;UBERON:0000125!2.83e-09!9;UBERON:0004111!1.04e-08!241;UBERON:0000467!2.65e-08!625;UBERON:0000062!3.12e-08!511;UBERON:0000480!3.25e-08!626;UBERON:0000064!6.56e-08!219;UBERON:0000481!7.12e-08!347;UBERON:0002050!1.03e-07!605;UBERON:0005423!1.03e-07!605;UBERON:0009663!1.20e-07!7;UBERON:0000923!2.48e-07!604;UBERON:0005291!2.48e-07!604;UBERON:0006598!2.48e-07!604;UBERON:0002532!2.48e-07!604;UBERON:0002420!2.64e-07!9;UBERON:0007245!2.64e-07!9;UBERON:0010009!2.64e-07!9;UBERON:0010011!2.64e-07!9;UBERON:0000454!2.64e-07!9;UBERON:0004733!6.71e-07!12;UBERON:0002028!6.71e-07!12;UBERON:0007277!6.71e-07!12;UBERON:0000200!8.94e-07!6|ontology_enrichment_uberon_v019=UBERON:0001869;4.00e-33;32!UBERON:0003528;3.32e-31;34!UBERON:0002020;3.32e-31;34!UBERON:0001893;9.88e-31;34!UBERON:0002791;2.19e-30;32!UBERON:0002780;1.11e-29;41!UBERON:0001890;1.11e-29;41!UBERON:0000956;8.40e-27;25!UBERON:0000203;8.40e-27;25!UBERON:0001950;1.58e-26;20!UBERON:0002619;7.08e-24;22!UBERON:0000073;2.04e-23;53!UBERON:0002616;2.04e-23;53!UBERON:0000955;1.70e-20;68!UBERON:0001017;1.83e-19;75!UBERON:0001016;6.56e-18;83!UBERON:0000922;2.74e-17;49!UBERON:0000369;5.05e-12;4!UBERON:0002435;5.05e-12;4!UBERON:0000204;5.05e-12;4!UBERON:0003296;1.27e-11;4!UBERON:0010133;1.27e-11;4!UBERON:0001894;9.46e-10;7!UBERON:0001871;1.81e-09;6!UBERON:0005383;2.41e-09;3!UBERON:0005382;2.41e-09;3!UBERON:0001872;4.11e-09;5!UBERON:0002420;1.05e-07;9!UBERON:0000125;1.05e-07;9!UBERON:0007245;1.05e-07;9!UBERON:0002308;1.05e-07;9!UBERON:0010009;1.05e-07;9!UBERON:0010011;1.05e-07;9!UBERON:0000454;1.05e-07;9!UBERON:0000200;1.36e-07;6!UBERON:0011216;4.90e-07;132!UBERON:0009663;7.63e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.20e-57,81;UBERON:0001016,1.10e-55,89;UBERON:0001049,1.90e-44,56;UBERON:0005068,1.90e-44,56;UBERON:0006241,1.90e-44,56;UBERON:0007135,1.90e-44,56;UBERON:0002780,8.50e-42,41;UBERON:0001890,8.50e-42,41;UBERON:0003080,8.50e-42,41;UBERON:0006240,8.50e-42,41;UBERON:0000073,1.76e-41,53;UBERON:0002616,1.76e-41,53;UBERON:0000955,2.24e-37,68;UBERON:0006238,2.24e-37,68;UBERON:0001869,8.71e-36,32;UBERON:0001893,2.22e-33,34;UBERON:0003528,3.55e-33,34;UBERON:0002020,3.55e-33,34;UBERON:0002791,2.90e-32,32;UBERON:0003075,1.30e-27,82;UBERON:0007284,1.30e-27,82;UBERON:0000956,5.04e-27,25;UBERON:0000203,5.04e-27,25;UBERON:0001950,8.60e-27,20;UBERON:0004121,3.65e-26,171;UBERON:0000924,3.65e-26,171;UBERON:0006601,3.65e-26,171;UBERON:0002346,6.35e-26,86;UBERON:0003056,7.99e-26,61;UBERON:0002619,4.09e-24,22;UBERON:0011216,1.41e-22,223;UBERON:0010371,2.14e-21,104;UBERON:0010314,2.47e-17,132;UBERON:0007023,3.54e-16,114;UBERON:0003296,7.12e-12,4;UBERON:0010133,7.12e-12,4;UBERON:0000369,7.32e-12,4;UBERON:0002435,7.32e-12,4;UBERON:00002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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=80823 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29353 | |||
|TSSclassifier=S | |||
|UniProt=Q6PI77 | |||
|association_with_transcript=0bp_to_ENST00000447531,ENST00000448867,NM_001142529,NM_001142530,uc011mru.1,uc011mrv.1_5end | |||
|description=CAGE_peak_4_at_BHLHB9_5end | |||
|id=chrX:102000893..102000918,+ | |||
|ontology_enrichment_celltype=CL:0000047!1.20e-09!8;CL:0000540!1.43e-07!6;CL:0000031!1.43e-07!6;CL:0000404!1.43e-07!6;CL:0002322!6.27e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000540;2.44e-16;6!CL:0000404;2.44e-16;6!CL:0002322;1.27e-14;5!CL:0002321;1.61e-08;15!CL:0002319;2.46e-08;25!CL:0000047;7.74e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.60e-21,8;CL:0000540,2.09e-16,6;CL:0000031,2.09e-16,6;CL:0000404,2.09e-16,6;CL:0002322,7.96e-15,5;CL:0002319,2.44e-08,25;CL:0000133,8.17e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;2.44e-16;6!UBERON:0006601;6.01e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.14e-48!82;UBERON:0005743!1.04e-46!86;UBERON:0000073!1.65e-44!94;UBERON:0001016!1.65e-44!94;UBERON:0001049!2.60e-42!57;UBERON:0005068!2.60e-42!57;UBERON:0006241!2.60e-42!57;UBERON:0007135!2.60e-42!57;UBERON:0002616!4.41e-39!59;UBERON:0000955!3.05e-36!69;UBERON:0006238!3.05e-36!69;UBERON:0002346!4.72e-36!90;UBERON:0003075!2.45e-35!86;UBERON:0007284!2.45e-35!86;UBERON:0002780!2.88e-35!41;UBERON:0001890!2.88e-35!41;UBERON:0006240!2.88e-35!41;UBERON:0003080!4.69e-34!42;UBERON:0007023!6.56e-31!115;UBERON:0001893!1.29e-30!34;UBERON:0002020!1.62e-30!34;UBERON:0003528!1.62e-30!34;UBERON:0002791!1.61e-29!33;UBERON:0001869!2.70e-29!32;UBERON:0000924!7.57e-28!173;UBERON:0006601!7.57e-28!173;UBERON:0003056!1.98e-27!61;UBERON:0004121!6.20e-27!169;UBERON:0000153!2.71e-24!129;UBERON:0007811!2.71e-24!129;UBERON:0000033!8.80e-24!123;UBERON:0000956!1.22e-22!25;UBERON:0000203!1.22e-22!25;UBERON:0002619!6.29e-20!22;UBERON:0001950!1.87e-18!20;UBERON:0000468!3.10e-11!659;UBERON:0000922!1.51e-10!612;UBERON:0000477!2.22e-10!286;UBERON:0000025!9.33e-10!194;UBERON:0000475!1.85e-09!365;UBERON:0003076!2.22e-09!15;UBERON:0003057!2.22e-09!15;UBERON:0000119!2.36e-09!312;UBERON:0000483!2.37e-09!309;UBERON:0002308!2.83e-09!9;UBERON:0000125!2.83e-09!9;UBERON:0004111!1.04e-08!241;UBERON:0000467!2.65e-08!625;UBERON:0000062!3.12e-08!511;UBERON:0000480!3.25e-08!626;UBERON:0000064!6.56e-08!219;UBERON:0000481!7.12e-08!347;UBERON:0002050!1.03e-07!605;UBERON:0005423!1.03e-07!605;UBERON:0009663!1.20e-07!7;UBERON:0000923!2.48e-07!604;UBERON:0005291!2.48e-07!604;UBERON:0006598!2.48e-07!604;UBERON:0002532!2.48e-07!604;UBERON:0002420!2.64e-07!9;UBERON:0007245!2.64e-07!9;UBERON:0010009!2.64e-07!9;UBERON:0010011!2.64e-07!9;UBERON:0000454!2.64e-07!9;UBERON:0004733!6.71e-07!12;UBERON:0002028!6.71e-07!12;UBERON:0007277!6.71e-07!12;UBERON:0000200!8.94e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.00e-33;32!UBERON:0003528;3.32e-31;34!UBERON:0002020;3.32e-31;34!UBERON:0001893;9.88e-31;34!UBERON:0002791;2.19e-30;32!UBERON:0002780;1.11e-29;41!UBERON:0001890;1.11e-29;41!UBERON:0000956;8.40e-27;25!UBERON:0000203;8.40e-27;25!UBERON:0001950;1.58e-26;20!UBERON:0002619;7.08e-24;22!UBERON:0000073;2.04e-23;53!UBERON:0002616;2.04e-23;53!UBERON:0000955;1.70e-20;68!UBERON:0001017;1.83e-19;75!UBERON:0001016;6.56e-18;83!UBERON:0000922;2.74e-17;49!UBERON:0000369;5.05e-12;4!UBERON:0002435;5.05e-12;4!UBERON:0000204;5.05e-12;4!UBERON:0003296;1.27e-11;4!UBERON:0010133;1.27e-11;4!UBERON:0001894;9.46e-10;7!UBERON:0001871;1.81e-09;6!UBERON:0005383;2.41e-09;3!UBERON:0005382;2.41e-09;3!UBERON:0001872;4.11e-09;5!UBERON:0002420;1.05e-07;9!UBERON:0000125;1.05e-07;9!UBERON:0007245;1.05e-07;9!UBERON:0002308;1.05e-07;9!UBERON:0010009;1.05e-07;9!UBERON:0010011;1.05e-07;9!UBERON:0000454;1.05e-07;9!UBERON:0000200;1.36e-07;6!UBERON:0011216;4.90e-07;132!UBERON:0009663;7.63e-07;7 | |||
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|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738726348460727,0.204000691244253,0,2.86235987131057,0.958120975510189,1.25542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0.144846518960824,0,0,0.378139268656271,0.665188192387692,0.175669571386252,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0.311211035399766,0,0.163461903113459,0.151357427644931,0.576175924479999,0.234321431833797,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0.245668634623536,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0.300476117813194,0.113432183160021,0,0.427114777637135,0.211931901159562,0,0,0,0,0,0,0.252433774244115,0.0920498986422993,0.161646056818812,0.355009592516614,0.302256294682921,0,0,0,0,2.92736894711029,3.18071443971565,2.90484857173796,2.69518743039963,4.54177531576131,3.28479623168247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0.0925884451585296,0,0,0,0.811512834825538,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,2.03275699377971,3.90419561572865,2.31986643833309,5.19300422536481,2.55175500661265,0,0,0,0.36807447515742,0,0,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0.434418072340414,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0.246381468041427,0,0.232420756919918,0,0,0,0.459257792658427,0,0.131124414959424,0.902399225814824,0.308061348417659,0,0,0.316654886678627,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.614014698904518,0,0.429680979473094,0.435050081742686,0.340906509664404,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0.353437207037059,0,0,0,0.48763373908959,0,0,0.272999822815972,0.282810863907425,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0.75894634753143,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,1.26602474769461,0,0,0.63337622438398,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0.394573622547734,0,0,3.87733098438087,2.31920245404628,9.98068990005971,0,0,0,0,0,0,0,0.291604613383254,0.868124974666461,2.65722415744152,2.17073589525734,3.05163472634166,0.331737779793674,0.591095237907095,1.75508317723178,0,0,1.30815439456455,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,1.22206028986725,0,0,0,0.606610196826093,0,1.1713222286267,0,0,0,0.394584402849391,1.20990716048664,3.36680037793539,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0,1.235585773681,1.35588444468319,0,0,3.79864775735272,0,0,0.640358984218058,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0.600420288709789,0.684526894459965,0,0,0,0.279282401272254,0.458320848023367,0,0.199679000498991,0,0,1.41085292222125,0,0,0,0,0,0,0,0.795229689809303,0.681017030557878,1.44677833618517,2.33817042215297,1.66176135211674,0,0,4.31321852271975,0,0,1.36381929150995,0,0,0,0,0,0,0,0.864221491201268,0.326587360109409,0,0.082092520749339,0,0,0,0,1.80996138906171,0.66116300871345,0,0.704815022316672,0,0.78602152549833,0,0,0,0,0,0,0,0,0,0,3.54427271986794,1.83039397352945,0.250381861413,0,0.443716206147409,1.24192805882767,0.138348634936231,0,0,0,0,0,0.144921028610825,0,0,0,0,0.251567901752575,0,0,0,0.15543720058278,0,0.159296767163702,0,0.310525913752519,0.414706207840855,0,0,0,0,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0.168942440653073,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,2.81367616868034,0,0,2.62103131660833,0.169732529954025,0,0.123935764259002,0,0.318004350653419,0,0,0,0,3.08300280463006,2.8339315265117,0.478901577171454,0.615349092722265,5.79764901309952,1.86724581653388,2.26065903884592,0,0,0,0,0,0,0,0,1.42899623863589,0,0.781514011233092,0,0,0,3.30934164630134,1.56215619722769,0.620060389503552,2.40980078736846,6.01672289920042,0,0,0.351742488719241,0,1.60710550763486,4.70797211106354,4.24875922965642,1.82129753081038,0.0887023701626388,0,0,1.35939465953663,1.90741043332262,0,0,0.78493092850514,3.14231179832004,0,0.913158720509496,0,0,0.428859265059938,0,0.348724276104376,0,1.60342272946051,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,1.1598144313382,1.45713297917742,0,0,3.68652281410463,0,0,0,0.154348316215889,0.437119121007915,0,0.490296643507811,0,0.981542335574726,1.48523200163543,1.6906229103336,0,0,0.257831551894309,0,0,0,0,1.46067277649303,0,0.430018749454354,0.946629373159108,2.10773619591836,4.79985759374415,1.0580536810308,0,0,0,0,0,0,0.509944148709909,1.3360870263278,0,2.50707539292375,0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| |||
|short_description=p4@BHLHB9 | |||
}} |
Revision as of 10:10, 14 September 2013
Short description: | p4@BHLHB9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_BHLHB9_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000447531, ENST00000448867, NM_001142529, NM_001142530, uc011mru.1, uc011mrv.1_5end |
EntrezGene: | BHLHB9 |
HGNC: | 29353 |
UniProt: | Q6PI77 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.60e-21 | 8 |
neuron | 2.09e-16 | 6 |
neuroblast | 2.09e-16 | 6 |
electrically signaling cell | 2.09e-16 | 6 |
embryonic stem cell | 7.96e-15 | 5 |
neural cell | 2.44e-08 | 25 |
neurectodermal cell | 8.17e-07 | 59 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.