FFCP PHASE1:Hg19::chrX:77041685..77041716,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=546 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=886 | |||
|TSSclassifier=S | |||
|UniProt=P46100,F8WDE0 | |||
|association_with_transcript=0bp_to_ENST00000373344,ENST00000395603,ENST00000400862,ENST00000480283_5end | |||
|coexpression_cluster_id=C986 | |||
|description=CAGE_peak_1_at_ATRX_5end | |||
|id=chrX:77041685..77041716,- | |||
|ontology_enrichment_celltype=CL:0000838!6.81e-10!52;CL:0000542!8.76e-10!53;CL:0000051!8.76e-10!53;CL:0000738!1.58e-08!140 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,6.81e-10,52;CL:0000542,8.76e-10,53;CL:0000051,8.76e-10,53;CL:0000738,1.50e-07,136 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.76e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@ATRX | |||
}} |
Revision as of 12:34, 14 September 2013
Short description: | p1@ATRX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ATRX_5end |
Coexpression cluster: | C986_cerebellum_CD4_granulocyte_Mast_pineal_non_pituitary |
Association with transcript: | 0bp_to_ENST00000373344, ENST00000395603, ENST00000400862, ENST00000480283_5end |
EntrezGene: | ATRX |
HGNC: | 886 |
UniProt: | P46100F8WDE0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 6.81e-10 | 52 |
lymphocyte | 8.76e-10 | 53 |
common lymphoid progenitor | 8.76e-10 | 53 |
leukocyte | 1.50e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
adult organism | 8.04e-20 | 114 |
nervous system | 8.80e-19 | 89 |
central nervous system | 8.31e-18 | 81 |
neural tube | 9.30e-16 | 56 |
neural rod | 9.30e-16 | 56 |
future spinal cord | 9.30e-16 | 56 |
neural keel | 9.30e-16 | 56 |
brain | 2.99e-15 | 68 |
future brain | 2.99e-15 | 68 |
regional part of nervous system | 1.41e-14 | 53 |
regional part of brain | 1.41e-14 | 53 |
regional part of forebrain | 3.47e-14 | 41 |
forebrain | 3.47e-14 | 41 |
anterior neural tube | 3.47e-14 | 41 |
future forebrain | 3.47e-14 | 41 |
brain grey matter | 2.74e-12 | 34 |
gray matter | 2.74e-12 | 34 |
regional part of telencephalon | 1.85e-11 | 32 |
neurectoderm | 4.15e-11 | 86 |
telencephalon | 5.19e-11 | 34 |
cerebral hemisphere | 5.97e-11 | 32 |
neural plate | 2.15e-10 | 82 |
presumptive neural plate | 2.15e-10 | 82 |
organ system subdivision | 1.25e-09 | 223 |
cerebral cortex | 5.22e-09 | 25 |
pallium | 5.22e-09 | 25 |
regional part of cerebral cortex | 1.38e-08 | 22 |
pre-chordal neural plate | 1.63e-08 | 61 |
ectoderm-derived structure | 3.12e-08 | 171 |
ectoderm | 3.12e-08 | 171 |
presumptive ectoderm | 3.12e-08 | 171 |
neocortex | 1.11e-07 | 20 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.