FFCP PHASE1:Hg19::chrX:47444981..47444990,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C315|description=CAGE_peak_at_chrX:47444981..47444990,-|id=chrX:47444981..47444990,-|ontology_enrichment_celltype=CL:0000055!1.19e-13!180;CL:0000680!2.84e-13!57;CL:0000056!2.84e-13!57;CL:0000355!2.84e-13!57;CL:0000187!1.23e-12!54;CL:0000048!8.40e-11!430;CL:0000183!1.51e-10!59;CL:0000192!1.97e-10!42;CL:0000514!1.97e-10!42;CL:0000393!3.54e-10!60;CL:0000211!3.54e-10!60;CL:0000723!4.33e-10!436;CL:0000034!3.45e-09!444;CL:0000359!3.71e-09!32;CL:0000057!1.58e-08!75;CL:0002494!1.14e-07!16|ontology_enrichment_celltype_v019=CL:0000499;6.81e-08;28!CL:0000359;3.51e-07;32!CL:0002334;9.61e-07;12|ontology_enrichment_celltype_v019_2=CL:0000048,2.81e-09,427;CL:0000723,5.48e-09,433;CL:0000034,1.30e-08,441;CL:0000499,5.62e-08,28;CL:0000680,6.69e-08,58;CL:0000056,6.69e-08,58;CL:0000355,6.69e-08,58;CL:0000187,2.72e-07,55;CL:0000057,3.07e-07,76;CL:0000192,4.42e-07,43;CL:0000514,4.42e-07,43;CL:0002334,6.89e-07,12;CL:0000359,6.94e-07,32|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000914!6.29e-12!83;UBERON:0002329!6.29e-12!83;UBERON:0003077!6.29e-12!83;UBERON:0003059!6.29e-12!83;UBERON:0007282!6.29e-12!83;UBERON:0009618!6.29e-12!83;UBERON:0007285!6.29e-12!83;UBERON:0002385!1.25e-11!63;UBERON:0001015!1.25e-11!63;UBERON:0000383!1.25e-11!63;UBERON:0001134!1.46e-11!61;UBERON:0002036!1.46e-11!61;UBERON:0003082!1.46e-11!61;UBERON:0004290!1.12e-10!70;UBERON:0000486!1.44e-09!82;UBERON:0000926!2.22e-09!448;UBERON:0004120!2.22e-09!448;UBERON:0006603!2.22e-09!448;UBERON:0001013!3.07e-09!14;UBERON:0002204!4.91e-09!167;UBERON:0004872!1.42e-08!84;UBERON:0005256!3.29e-08!143;UBERON:0007100!4.69e-08!27;UBERON:0002100!7.69e-08!216;UBERON:0000948!1.37e-07!24;UBERON:0005498!1.37e-07!24;UBERON:0004140!1.37e-07!24;UBERON:0009881!1.37e-07!24;UBERON:0004141!1.37e-07!24;UBERON:0003084!1.37e-07!24;UBERON:0007005!1.37e-07!24;UBERON:0004139!1.37e-07!24;UBERON:0004291!1.37e-07!24;UBERON:0001009!7.01e-07!113;UBERON:0001637!9.49e-07!42;UBERON:0003509!9.49e-07!42;UBERON:0004572!9.49e-07!42|ontology_enrichment_uberon_v019=UBERON:0001013;4.08e-11;14!UBERON:0004457;2.60e-09;9!UBERON:0000042;2.60e-09;9!UBERON:0005406;7.65e-08;2!UBERON:0003513;9.33e-08;7|ontology_enrichment_uberon_v019_2=UBERON:0001013,2.89e-11,14;UBERON:0005406,5.29e-08,2;UBERON:0003513,9.65e-08,7;UBERON:0007524,1.09e-07,73;UBERON:0000486,1.91e-07,83;UBERON:0001134,3.37e-07,62;UBERON:0002036,3.37e-07,62;UBERON:0003082,3.37e-07,62;UBERON:0007503,4.82e-07,78;UBERON:0002329,5.82e-07,71;UBERON:0003059,5.82e-07,71;UBERON:0007282,5.82e-07,71;UBERON:0004290,5.82e-07,71;UBERON:0009618,5.82e-07,71;UBERON:0004457,5.82e-07,12;UBERON:0000042,5.82e-07,12;UBERON:0002385,6.98e-07,64;UBERON:0001015,6.98e-07,64;UBERON:0000383,6.98e-07,64;UBERON:0002072,7.78e-07,5;UBERON:0003077,8.04e-07,72;UBERON:0007285,8.04e-07,72|phase1_expression=0.363356758541113,0.642301571672949,0.281908808191942,2.00146596706261,0.446961094427288,3.48935409640147,2.53299878168311,0.631719873426831,1.56711376919903,0.245733936501509,0,0,0,0.37129905888014,0.994192127183747,0.672325146451775,0.602694528023977,0,0.487932798790507,0,0.204000691244253,0,0,0.136874425072884,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0.309706370895104,0.575384784644301,0.512321413058201,0,0.689491361473237,0,0,0.188242339542605,0,0,0.612167784741805,0.320929027076094,0,0,0,0,0.580418477257168,0.56738522469114,0.622822248995575,0.251248665256743,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35350429851818,0.511450247374121,0,0.50133791063589,0.579386075843295,0,1.45990461090791,0.0945348171640679,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0.22452937262617,0,0,0,0.183201743930407,0,0,0,1.49091585508596,0,0,0.573673241497627,1.06400514659507,0.560677600142307,0,0.98667019366864,0.311211035399766,0.134710672069688,1.47115712802113,0,0.576175924479999,0,0.312160076830321,0,2.09228152772521,0,0.161872944368132,0,0,0.368502951935304,0.723280468230358,0,0.494533858557114,0,2.87447256726495,0,0.125118519871964,0,0.438977620880838,1.22595118319608,1.20190447125277,0.113432183160021,0,0,0,0.600182192168805,0.103052529238439,0,0,0,0.194874010322397,0,0.0920498986422993,0.161646056818812,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88751792667834,0,0,0,0,0.217879444092406,0,0.269662616320329,0,0.38474715694639,0,1.40241773803446,0,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0,0,1.03993478527958,0,0,0.117408694235822,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C315 | |||
|description=CAGE_peak_at_chrX:47444981..47444990,- | |||
|id=chrX:47444981..47444990,- | |||
|ontology_enrichment_celltype=CL:0000055!1.19e-13!180;CL:0000680!2.84e-13!57;CL:0000056!2.84e-13!57;CL:0000355!2.84e-13!57;CL:0000187!1.23e-12!54;CL:0000048!8.40e-11!430;CL:0000183!1.51e-10!59;CL:0000192!1.97e-10!42;CL:0000514!1.97e-10!42;CL:0000393!3.54e-10!60;CL:0000211!3.54e-10!60;CL:0000723!4.33e-10!436;CL:0000034!3.45e-09!444;CL:0000359!3.71e-09!32;CL:0000057!1.58e-08!75;CL:0002494!1.14e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000499;6.81e-08;28!CL:0000359;3.51e-07;32!CL:0002334;9.61e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.81e-09,427;CL:0000723,5.48e-09,433;CL:0000034,1.30e-08,441;CL:0000499,5.62e-08,28;CL:0000680,6.69e-08,58;CL:0000056,6.69e-08,58;CL:0000355,6.69e-08,58;CL:0000187,2.72e-07,55;CL:0000057,3.07e-07,76;CL:0000192,4.42e-07,43;CL:0000514,4.42e-07,43;CL:0002334,6.89e-07,12;CL:0000359,6.94e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!6.29e-12!83;UBERON:0002329!6.29e-12!83;UBERON:0003077!6.29e-12!83;UBERON:0003059!6.29e-12!83;UBERON:0007282!6.29e-12!83;UBERON:0009618!6.29e-12!83;UBERON:0007285!6.29e-12!83;UBERON:0002385!1.25e-11!63;UBERON:0001015!1.25e-11!63;UBERON:0000383!1.25e-11!63;UBERON:0001134!1.46e-11!61;UBERON:0002036!1.46e-11!61;UBERON:0003082!1.46e-11!61;UBERON:0004290!1.12e-10!70;UBERON:0000486!1.44e-09!82;UBERON:0000926!2.22e-09!448;UBERON:0004120!2.22e-09!448;UBERON:0006603!2.22e-09!448;UBERON:0001013!3.07e-09!14;UBERON:0002204!4.91e-09!167;UBERON:0004872!1.42e-08!84;UBERON:0005256!3.29e-08!143;UBERON:0007100!4.69e-08!27;UBERON:0002100!7.69e-08!216;UBERON:0000948!1.37e-07!24;UBERON:0005498!1.37e-07!24;UBERON:0004140!1.37e-07!24;UBERON:0009881!1.37e-07!24;UBERON:0004141!1.37e-07!24;UBERON:0003084!1.37e-07!24;UBERON:0007005!1.37e-07!24;UBERON:0004139!1.37e-07!24;UBERON:0004291!1.37e-07!24;UBERON:0001009!7.01e-07!113;UBERON:0001637!9.49e-07!42;UBERON:0003509!9.49e-07!42;UBERON:0004572!9.49e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;4.08e-11;14!UBERON:0004457;2.60e-09;9!UBERON:0000042;2.60e-09;9!UBERON:0005406;7.65e-08;2!UBERON:0003513;9.33e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,2.89e-11,14;UBERON:0005406,5.29e-08,2;UBERON:0003513,9.65e-08,7;UBERON:0007524,1.09e-07,73;UBERON:0000486,1.91e-07,83;UBERON:0001134,3.37e-07,62;UBERON:0002036,3.37e-07,62;UBERON:0003082,3.37e-07,62;UBERON:0007503,4.82e-07,78;UBERON:0002329,5.82e-07,71;UBERON:0003059,5.82e-07,71;UBERON:0007282,5.82e-07,71;UBERON:0004290,5.82e-07,71;UBERON:0009618,5.82e-07,71;UBERON:0004457,5.82e-07,12;UBERON:0000042,5.82e-07,12;UBERON:0002385,6.98e-07,64;UBERON:0001015,6.98e-07,64;UBERON:0000383,6.98e-07,64;UBERON:0002072,7.78e-07,5;UBERON:0003077,8.04e-07,72;UBERON:0007285,8.04e-07,72 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.281908808191942,2.00146596706261,0.446961094427288,3.48935409640147,2.53299878168311,0.631719873426831,1.56711376919903,0.245733936501509,0,0,0,0.37129905888014,0.994192127183747,0.672325146451775,0.602694528023977,0,0.487932798790507,0,0.204000691244253,0,0,0.136874425072884,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0.309706370895104,0.575384784644301,0.512321413058201,0,0.689491361473237,0,0,0.188242339542605,0,0,0.612167784741805,0.320929027076094,0,0,0,0,0.580418477257168,0.56738522469114,0.622822248995575,0.251248665256743,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35350429851818,0.511450247374121,0,0.50133791063589,0.579386075843295,0,1.45990461090791,0.0945348171640679,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0.22452937262617,0,0,0,0.183201743930407,0,0,0,1.49091585508596,0,0,0.573673241497627,1.06400514659507,0.560677600142307,0,0.98667019366864,0.311211035399766,0.134710672069688,1.47115712802113,0,0.576175924479999,0,0.312160076830321,0,2.09228152772521,0,0.161872944368132,0,0,0.368502951935304,0.723280468230358,0,0.494533858557114,0,2.87447256726495,0,0.125118519871964,0,0.438977620880838,1.22595118319608,1.20190447125277,0.113432183160021,0,0,0,0.600182192168805,0.103052529238439,0,0,0,0.194874010322397,0,0.0920498986422993,0.161646056818812,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88751792667834,0,0,0,0,0.217879444092406,0,0.269662616320329,0,0.38474715694639,0,1.40241773803446,0,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0,0,1.03993478527958,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775630294546667,3.57656445851882,3.381211010224,0,0,0,0,0.532844358032199,0.285955987316295,0,0,0.65147236858747,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.434343920002738,1.02738161275192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50051156317903,0.271265023699736,0,0.178428988797162,0,0.117141414992713,0,11.3703752027992,0,0,0.553107505625109,0.173767228936166,0,0,0,0,0,0,0,0,1.73675465473144,0.153461973288062,0.561320188866147,1.40953064181271,0,3.37793234401576,1.48418066444991,0.462629081407967,2.30830242907065,0,0,0.581051892299796,0,0,0.276242966807689,0.68888668898764,1.0925470080403,2.49136388422906,0,0.0770153371044148,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,1.07834031980251,0.15350367472613,0.137836572484531,0.107420244868274,0.145016693914229,0.340906509664404,0.0890320356467374,0,0,0,0.2023155617111,0,2.20368642781448,0.6970372701606,1.23213432070436,0,0,0.37064843820784,0.572499546967965,0.372158369359667,0,1.5250415513906,0,0,0.95460974377781,0.78494864019923,0,0.54907405947211,0.589062011728432,0.404364963146632,3.17020642346017,0.421258456238981,0,4.6305563029944,0,0.136499911407986,1.41405431953713,3.39024349860728,0,1.32687795048244,1.31535265576129,0,1.31178950409327,0.202910376962704,0,1.12678241012897,0,0.0982490410131212,0,0.709522128141196,1.89996871767898,2.30506425071931,0,0,0,0,1.08890984861323,0,0,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0.211673582723883,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0.284136146806413,0,0,0,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0.20453736500431,0,0.311039587661807,0,0,1.02314474045374,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.153900517007594,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0.31396051279005,0.166211681900156,0,0,0.335643173951685,0,0.158936578980379,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.146178634172371,0.164230914106418,0.0969890164884194,0.0882561266915003,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858452096273142,0.223171457441873,0,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0.179287339332845,0,1.42939065274673,0.662091970365432,0,1.62899880526114,0.864221491201268,1.30634944043764,0,0.082092520749339,0.340776043570843,0,0,0,0,0,0,0,0,0,0.414239055347196,1.48849806543585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05845565607623,0,0,0.597019211547496,0.467426619694449,1.10961172300523,0,0.754703705257725,0,2.05956061557231,1.20984739010591,0.621748802331122,0,0.159296767163702,0.449803112163605,1.08684069813382,1.65882483136342,1.86089200190596,0,0.601030435988874,0.761610424337591,0.406870733204662,0,0,2.32016879939247,0.398095888698616,0,0,0.673498977531838,0,0,0,0,0.226705925512272,0.231522474323834,0,0,0.308801447160972,0.219284049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| |||
|short_description=p@chrX:47444981..47444990,- | |||
}} |
Revision as of 12:02, 14 September 2013
Short description: | p@chrX:47444981..47444990, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:47444981..47444990, - |
Coexpression cluster: | C315_Osteoblast_Preadipocyte_mesenchymal_Smooth_Cardiac_leiomyoma_Adipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 2.81e-09 | 427 |
somatic stem cell | 5.48e-09 | 433 |
stem cell | 1.30e-08 | 441 |
stromal cell | 5.62e-08 | 28 |
muscle precursor cell | 6.69e-08 | 58 |
myoblast | 6.69e-08 | 58 |
multi-potent skeletal muscle stem cell | 6.69e-08 | 58 |
muscle cell | 2.72e-07 | 55 |
fibroblast | 3.07e-07 | 76 |
smooth muscle cell | 4.42e-07 | 43 |
smooth muscle myoblast | 4.42e-07 | 43 |
preadipocyte | 6.89e-07 | 12 |
vascular associated smooth muscle cell | 6.94e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 2.89e-11 | 14 |
perirenal fat | 5.29e-08 | 2 |
trunk blood vessel | 9.65e-08 | 7 |
dense mesenchyme tissue | 1.09e-07 | 73 |
multilaminar epithelium | 1.91e-07 | 83 |
skeletal muscle tissue | 3.37e-07 | 62 |
striated muscle tissue | 3.37e-07 | 62 |
myotome | 3.37e-07 | 62 |
epithelial vesicle | 4.82e-07 | 78 |
somite | 5.82e-07 | 71 |
presomitic mesoderm | 5.82e-07 | 71 |
presumptive segmental plate | 5.82e-07 | 71 |
dermomyotome | 5.82e-07 | 71 |
trunk paraxial mesoderm | 5.82e-07 | 71 |
cavity lining | 5.82e-07 | 12 |
serous membrane | 5.82e-07 | 12 |
muscle tissue | 6.98e-07 | 64 |
musculature | 6.98e-07 | 64 |
musculature of body | 6.98e-07 | 64 |
hypodermis | 7.78e-07 | 5 |
paraxial mesoderm | 8.04e-07 | 72 |
presumptive paraxial mesoderm | 8.04e-07 | 72 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.