FFCP PHASE1:Hg19::chrX:19587635..19587644,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=30011|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=13867|TSSclassifier=S|UniProt=|association_with_transcript=-30bp_to_uc010nfm.2_5end|coexpression_cluster_id=C20|description=CAGE_peak_38_at_SH3KBP1_5end|id=chrX:19587635..19587644,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0004140;3.75e-18;1!UBERON:0008801;6.78e-18;1!UBERON:0010227;6.78e-18;1!UBERON:0010226;1.33e-17;1!UBERON:0005062;1.64e-17;4!UBERON:0007284;1.64e-17;4!UBERON:0008814;1.27e-09;2!UBERON:0010056;1.27e-09;2|ontology_enrichment_disease=DOID:114!7.30e-17!2;DOID:178!3.88e-09!1;DOID:326!3.88e-09!1;DOID:3978!3.88e-09!1;DOID:3394!3.88e-09!1;DOID:5844!3.88e-09!1;DOID:1287!7.01e-09!4|ontology_enrichment_disease_v019=DOID:114;6.52e-34;2!DOID:178;1.33e-17;1!DOID:326;1.33e-17;1!DOID:3978;1.33e-17;1!DOID:3394;1.33e-17;1!DOID:5844;1.33e-17;1!DOID:1287;1.64e-17;4|ontology_enrichment_disease_v019_2=DOID:114,8.39e-34,2;DOID:178,1.70e-17,1;DOID:326,1.70e-17,1;DOID:3978,1.70e-17,1;DOID:3394,1.70e-17,1;DOID:5844,1.70e-17,1;DOID:1287,1.86e-17,4|ontology_enrichment_uberon=UBERON:0003978!2.64e-24!3;UBERON:0009751!2.64e-24!3;UBERON:0000946!2.64e-24!3;UBERON:0002523!2.64e-24!3;UBERON:0005983!2.64e-24!3;UBERON:0002165!2.64e-24!3;UBERON:0002062!2.64e-24!3;UBERON:0007280!2.64e-24!3;UBERON:0004151!3.91e-24!3;UBERON:0007100!2.01e-22!27;UBERON:0003103!1.31e-19!69;UBERON:0000341!1.00e-16!2;UBERON:0002081!1.17e-16!2;UBERON:0001829!1.37e-16!2;UBERON:0002133!1.37e-16!2;UBERON:0007023!2.16e-16!115;UBERON:0003127!3.77e-16!2;UBERON:0000948!2.09e-11!24;UBERON:0005498!2.09e-11!24;UBERON:0004140!2.09e-11!24;UBERON:0009881!2.09e-11!24;UBERON:0004141!2.09e-11!24;UBERON:0003084!2.09e-11!24;UBERON:0007005!2.09e-11!24;UBERON:0004139!2.09e-11!24;UBERON:0004291!2.09e-11!24;UBERON:0001723!2.26e-11!3;UBERON:0001033!2.26e-11!3;UBERON:0010056!2.26e-11!3;UBERON:0000078!1.25e-10!18;UBERON:0002146!1.74e-09!1;UBERON:0005623!1.74e-09!1;UBERON:0001831!2.60e-09!1;UBERON:0001567!2.60e-09!1;UBERON:0008801!2.60e-09!1;UBERON:0002079!2.82e-09!1;UBERON:0002084!3.05e-09!1;UBERON:0002082!3.05e-09!1;UBERON:0004706!3.05e-09!1;UBERON:0002135!3.31e-09!1;UBERON:0002134!4.19e-09!1;UBERON:0005208!4.19e-09!1;UBERON:0005946!4.19e-09!1;UBERON:0005965!4.19e-09!1;UBERON:0002078!4.19e-09!1;UBERON:0000166!4.38e-09!21;UBERON:0001736!5.31e-09!1;UBERON:0006298!5.31e-09!1;UBERON:0002372!6.22e-09!1;UBERON:0001961!6.22e-09!1;UBERON:0001744!6.22e-09!1;UBERON:0001735!6.22e-09!1;UBERON:0001048!1.64e-07!168;UBERON:0001042!1.68e-07!10;UBERON:0009145!1.68e-07!10;UBERON:0006562!7.36e-07!11;UBERON:0000165!9.24e-07!28;UBERON:0000930!9.24e-07!28|ontology_enrichment_uberon_v019=UBERON:0007100;1.07e-41;25!UBERON:0003978;5.44e-23;3!UBERON:0000946;5.44e-23;3!UBERON:0004151;8.04e-23;3!UBERON:0000948;7.67e-19;22!UBERON:0002146;3.75e-18;1!UBERON:0005623;3.75e-18;1!UBERON:0002079;6.78e-18;1!UBERON:0001831;6.78e-18;1!UBERON:0001567;6.78e-18;1!UBERON:0002084;1.33e-17;1!UBERON:0002135;1.33e-17;1!UBERON:0002082;1.33e-17;1!UBERON:0000341;1.27e-09;2!UBERON:0001829;1.27e-09;2!UBERON:0002081;1.27e-09;2!UBERON:0004089;1.27e-09;2!UBERON:0003103;1.61e-09;61!UBERON:0003127;1.78e-09;2!UBERON:0002133;1.78e-09;2!UBERON:0010313;1.44e-07;10!UBERON:0001723;7.92e-07;3!UBERON:0001033;7.92e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.45e-38,27;UBERON:0003103,1.67e-23,68;UBERON:0003978,4.61e-23,3;UBERON:0009751,4.61e-23,3;UBERON:0000946,4.61e-23,3;UBERON:0002523,4.61e-23,3;UBERON:0005983,4.61e-23,3;UBERON:0002165,4.61e-23,3;UBERON:0002062,4.61e-23,3;UBERON:0007280,4.61e-23,3;UBERON:0004151,8.04e-23,3;UBERON:0002146,3.16e-18,1;UBERON:0005623,3.16e-18,1;UBERON:0001831,7.37e-18,1;UBERON:0001567,7.37e-18,1;UBERON:0008801,7.37e-18,1;UBERON:0002079,8.72e-18,1;UBERON:0002084,1.03e-17,1;UBERON:0002082,1.03e-17,1;UBERON:0010226,1.03e-17,1;UBERON:0002135,1.22e-17,1;UBERON:0000948,2.73e-17,24;UBERON:0005498,2.73e-17,24;UBERON:0004140,2.73e-17,24;UBERON:0009881,2.73e-17,24;UBERON:0004141,2.73e-17,24;UBERON:0003084,2.73e-17,24;UBERON:0007005,2.73e-17,24;UBERON:0004139,2.73e-17,24;UBERON:0004291,2.73e-17,24;UBERON:0007023,9.64e-14,114;UBERON:0004797,1.85e-10,7;UBERON:0000341,1.12e-09,2;UBERON:0001829,1.33e-09,2;UBERON:0004089,1.33e-09,2;UBERON:0002081,1.44e-09,2;UBERON:0010227,1.44e-09,2;UBERON:0002133,1.71e-09,2;UBERON:0003127,1.86e-09,2;UBERON:0001009,6.56e-09,112;UBERON:0010313,1.37e-07,10;UBERON:0002342,1.37e-07,10;UBERON:0005062,1.37e-07,10;UBERON:0001723,7.70e-07,3;UBERON:0001033,7.70e-07,3;UBERON:0010056,7.70e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=30011 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=13867 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-30bp_to_uc010nfm.2_5end | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_38_at_SH3KBP1_5end | |||
|id=chrX:19587635..19587644,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;3.75e-18;1!UBERON:0008801;6.78e-18;1!UBERON:0010227;6.78e-18;1!UBERON:0010226;1.33e-17;1!UBERON:0005062;1.64e-17;4!UBERON:0007284;1.64e-17;4!UBERON:0008814;1.27e-09;2!UBERON:0010056;1.27e-09;2 | |||
|ontology_enrichment_disease=DOID:114!7.30e-17!2;DOID:178!3.88e-09!1;DOID:326!3.88e-09!1;DOID:3978!3.88e-09!1;DOID:3394!3.88e-09!1;DOID:5844!3.88e-09!1;DOID:1287!7.01e-09!4 | |||
|ontology_enrichment_disease_v019=DOID:114;6.52e-34;2!DOID:178;1.33e-17;1!DOID:326;1.33e-17;1!DOID:3978;1.33e-17;1!DOID:3394;1.33e-17;1!DOID:5844;1.33e-17;1!DOID:1287;1.64e-17;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,8.39e-34,2;DOID:178,1.70e-17,1;DOID:326,1.70e-17,1;DOID:3978,1.70e-17,1;DOID:3394,1.70e-17,1;DOID:5844,1.70e-17,1;DOID:1287,1.86e-17,4 | |||
|ontology_enrichment_uberon=UBERON:0003978!2.64e-24!3;UBERON:0009751!2.64e-24!3;UBERON:0000946!2.64e-24!3;UBERON:0002523!2.64e-24!3;UBERON:0005983!2.64e-24!3;UBERON:0002165!2.64e-24!3;UBERON:0002062!2.64e-24!3;UBERON:0007280!2.64e-24!3;UBERON:0004151!3.91e-24!3;UBERON:0007100!2.01e-22!27;UBERON:0003103!1.31e-19!69;UBERON:0000341!1.00e-16!2;UBERON:0002081!1.17e-16!2;UBERON:0001829!1.37e-16!2;UBERON:0002133!1.37e-16!2;UBERON:0007023!2.16e-16!115;UBERON:0003127!3.77e-16!2;UBERON:0000948!2.09e-11!24;UBERON:0005498!2.09e-11!24;UBERON:0004140!2.09e-11!24;UBERON:0009881!2.09e-11!24;UBERON:0004141!2.09e-11!24;UBERON:0003084!2.09e-11!24;UBERON:0007005!2.09e-11!24;UBERON:0004139!2.09e-11!24;UBERON:0004291!2.09e-11!24;UBERON:0001723!2.26e-11!3;UBERON:0001033!2.26e-11!3;UBERON:0010056!2.26e-11!3;UBERON:0000078!1.25e-10!18;UBERON:0002146!1.74e-09!1;UBERON:0005623!1.74e-09!1;UBERON:0001831!2.60e-09!1;UBERON:0001567!2.60e-09!1;UBERON:0008801!2.60e-09!1;UBERON:0002079!2.82e-09!1;UBERON:0002084!3.05e-09!1;UBERON:0002082!3.05e-09!1;UBERON:0004706!3.05e-09!1;UBERON:0002135!3.31e-09!1;UBERON:0002134!4.19e-09!1;UBERON:0005208!4.19e-09!1;UBERON:0005946!4.19e-09!1;UBERON:0005965!4.19e-09!1;UBERON:0002078!4.19e-09!1;UBERON:0000166!4.38e-09!21;UBERON:0001736!5.31e-09!1;UBERON:0006298!5.31e-09!1;UBERON:0002372!6.22e-09!1;UBERON:0001961!6.22e-09!1;UBERON:0001744!6.22e-09!1;UBERON:0001735!6.22e-09!1;UBERON:0001048!1.64e-07!168;UBERON:0001042!1.68e-07!10;UBERON:0009145!1.68e-07!10;UBERON:0006562!7.36e-07!11;UBERON:0000165!9.24e-07!28;UBERON:0000930!9.24e-07!28 | |||
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|short_description=p38@SH3KBP1 | |||
}} |
Revision as of 11:32, 14 September 2013
Short description: | p38@SH3KBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_38_at_SH3KBP1_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -30bp_to_uc010nfm.2_5end |
EntrezGene: | SH3KBP1 |
HGNC: | 13867 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 8.39e-34 | 2 |
vascular disease | 1.70e-17 | 1 |
ischemia | 1.70e-17 | 1 |
extrinsic cardiomyopathy | 1.70e-17 | 1 |
myocardial ischemia | 1.70e-17 | 1 |
myocardial infarction | 1.70e-17 | 1 |
cardiovascular system disease | 1.86e-17 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.