FFCP PHASE1:Hg19::chr9:128510454..128510469,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5090|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8634|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000491787_5end|description=CAGE_peak_3_at_PBX3_5end|id=chr9:128510454..128510469,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.03e-12!115;UBERON:0000062!7.45e-08!511;UBERON:0000467!5.08e-07!625;UBERON:0000480!7.43e-07!626;UBERON:0003076!9.65e-07!15;UBERON:0003057!9.65e-07!15|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.64e-09,114;UBERON:0003076,8.49e-09,15;UBERON:0003057,8.49e-09,15;UBERON:0004732,8.29e-07,13|phase1_expression=0.908391896352783,1.49870366723688,1.12763523276777,1.0007329835313,1.34088328328186,0,0,0,0.261185628199839,0.245733936501509,0,0.218441372130172,0.527533956456907,0,0,0,1.20538905604795,0.730310090387373,0,0.492484232307152,1.02000345622126,0.313454721478088,0.286235987131057,0.410623275218653,0,1.45185470921107,1.39571002064908,0.708397031823113,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0.553995408531877,0,0.434021741431704,1.56740831967947,0.32389366601898,0.515151135268373,0.145398238779565,0.377875943688809,0.242584061187816,0.464858073811369,0.822335776043652,0.309706370895104,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0.224723484445085,0.612167784741805,0,0,0.329851300186716,0.598390972864896,0,0,0,0,0,0,0,0,0,0,0.633765858935825,1.06302149982522,0,0.336985893439485,0.450530678524519,0.16072558669708,0.285012743741249,0.19891667719909,0.91332076882317,0,0.546138611262131,0,0.426730222566507,0.400395987036012,0,0,0,0.569212969109448,0,0,0,0.560508562981536,0.526768169550154,0.196709770113833,0,0,0,0.32592226663359,0,0,0.111410456885174,0,0,0,0.128091319725675,0.390178042679635,0.164437904603676,0.276350017785848,0.289803085735052,0,0.267540828089713,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0,0.403213486449465,0,0,2.43806866313962,0.670700859703636,0.255725123687061,0,0,0.579386075843295,1.5905718941022,1.94653948121054,0.945348171640679,0.221729397462564,0.43917392846563,0.982343066232845,0,0.370784442784429,0,0,0.398873881556595,0,0.571994910780128,0.74291500265913,0,0,0.347140501607594,0,0,0,0,0.516833518338658,0.35576626268671,0.33472061276467,0.402829317109147,0,0.488124115096339,0,0,0.17859945656816,0.673588117878509,0.450445921933289,0,0,0.183201743930407,0,3.87780264148325,0,0.496971951695318,1.01304409331664,9.1362334761121,3.72887606973458,0.709336764396714,1.68203280042692,0,0.24666754841716,2.48968828319813,0.808264032418128,0.326923806226917,0.756787138224657,0,0.70296429550139,0,0.570471821544449,0.298897361103602,0.117434498643765,0.161872944368132,0.140450806702248,1.22492502752936,0.122834317311768,1.03325781175765,1.18800285728205,0,0.910161361938026,2.15585442544872,0.336672227908132,0.375355559615893,0.277064115484183,0.877955241761676,0.919463387397059,1.05166641234618,0.453728732640084,2.15267562826634,0,0.211931901159562,4.80145753735044,1.64884046781502,1.8034837803194,0.37223371266318,2.53164498361899,0.194874010322397,3.78650661366172,0.552299391853796,2.26304479546337,2.4850671476163,1.0075209822764,0.339121184620975,0.57978255948989,0.545492241181669,0.286804595389004,0.243947412259191,0,0.580969714347592,0.10366105501537,0.252320850875628,1.45990943630332,1.56449532329816,0,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,5.07020139287323,0,2.95394953340702,0,0,0.343135620597051,0.439001141634502,0,0,0.370353780634118,0,0,0,0.231860809950154,0.234817388471643,0,0,0,0,2.57545848628462,1.23108503043699,0.702012795417713,0.594524649154913,1.87467667973554,0.503946384596579,0.283550194484773,0.447792613514241,0.290633938513962,0,2.46331618947972,1.32072651019839,2.07328115540772,2.01767934783746,2.65109110195398,0,0,0,0,0,0,0,0.448524337381443,0,0,0.775630294546667,0,0,0.797814349754612,0,0,0,0.266422179016099,2.00169191121407,0.542621605391443,0,0.325736184293735,0.355391948742546,0,1.50719688529793,0,0.499864955910285,0,1.00451418286425,0,0,0,1.42636905040718,1.30303176000821,0.205476322550383,0.179060963239896,0,0.197030760201927,0,0,0.508189248444927,0,0,0.335032530668698,0,1.49801404789436,0,0.828831026872071,0,0,0,0.831883446123229,1.42743191037729,1.89242898040722,0.35142424497814,0.601892199455438,0,1.03473071292505,0.664225598535437,0,2.86715927744673,0.391602314925481,0,0.620304078368662,0.862856803274467,0.213455115606889,0,0,0,0.992431231275107,1.68808170616869,0,1.02511319404561,1.53512174720011,0.321707842287215,0,0.462629081407967,0.710246901252508,0.98552587216571,0,0.581051892299796,0,0.40101294060657,0.184161977871793,1.26295892981067,1.27463817604702,4.58935452357984,0,0,0,1.46139224653261,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5090 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8634 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000491787_5end | |||
|description=CAGE_peak_3_at_PBX3_5end | |||
|id=chr9:128510454..128510469,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.03e-12!115;UBERON:0000062!7.45e-08!511;UBERON:0000467!5.08e-07!625;UBERON:0000480!7.43e-07!626;UBERON:0003076!9.65e-07!15;UBERON:0003057!9.65e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.64e-09,114;UBERON:0003076,8.49e-09,15;UBERON:0003057,8.49e-09,15;UBERON:0004732,8.29e-07,13 | |||
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| |||
|short_description=p3@PBX3 | |||
}} |
Revision as of 07:27, 14 September 2013
Short description: | p3@PBX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PBX3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000491787_5end |
EntrezGene: | PBX3 |
HGNC: | 8634 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.64e-09 | 114 |
posterior neural tube | 8.49e-09 | 15 |
chordal neural plate | 8.49e-09 | 15 |
segmental subdivision of nervous system | 8.29e-07 | 13 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.