FFCP PHASE1:Hg19::chr9:127020503..127020537,+: Difference between revisions
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{{FFCP | 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7552590896169,0.639701945702943,0.476128862927481,0.322944549180031,0.372448285775147,5.0459338161276,0.12729431655633,0.404234377916439,0.435433495793923,0.684466602170562,1.34704106029175,1.29099969706817,0.332660356546013,0.325613074443898,0.426909383510862,13.5150597600858,0.808426818959282,0,0.977931553462932,1.62758471326295,1.99727032255654,0.603821380773079,1.28227396921293|short_description=p4@NEK6}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=10783 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7749 | |||
|TSSclassifier=S | |||
|UniProt=Q9HC98 | |||
|association_with_transcript=0bp_to_ENST00000545174,NM_001166168_5end | |||
|description=CAGE_peak_4_at_NEK6_5end | |||
|id=chr9:127020503..127020537,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.32e-19!180;CL:0000222!4.69e-11!119;CL:0000057!7.06e-11!75;CL:0000183!1.09e-09!59;CL:0002371!1.53e-09!591;CL:0000144!4.25e-09!625;CL:0000048!2.36e-08!430;CL:0000680!3.20e-08!57;CL:0000056!3.20e-08!57;CL:0000355!3.20e-08!57;CL:0000187!6.49e-08!54;CL:0000723!2.28e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000134;9.46e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.92e-11,76;CL:0000222,3.62e-11,121;CL:0000048,2.75e-10,427;CL:0000723,3.13e-09,433;CL:0000680,7.52e-09,58;CL:0000056,7.52e-09,58;CL:0000355,7.52e-09,58;CL:0000187,1.64e-08,55;CL:0000034,6.26e-08,441;CL:0000192,7.35e-07,43;CL:0000514,7.35e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.25e-12!365;UBERON:0000119!1.33e-10!312;UBERON:0005256!2.63e-10!143;UBERON:0000483!5.68e-10!309;UBERON:0000914!6.09e-10!83;UBERON:0002329!6.09e-10!83;UBERON:0003077!6.09e-10!83;UBERON:0003059!6.09e-10!83;UBERON:0007282!6.09e-10!83;UBERON:0009618!6.09e-10!83;UBERON:0007285!6.09e-10!83;UBERON:0000467!9.61e-09!625;UBERON:0000480!1.41e-08!626;UBERON:0004290!1.66e-08!70;UBERON:0000468!1.73e-08!659;UBERON:0001134!5.97e-08!61;UBERON:0002036!5.97e-08!61;UBERON:0003082!5.97e-08!61;UBERON:0002385!6.53e-08!63;UBERON:0001015!6.53e-08!63;UBERON:0000383!6.53e-08!63;UBERON:0000477!2.64e-07!286;UBERON:0000490!3.28e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0006876;5.62e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.13e-09,78;UBERON:0000119,2.58e-09,309;UBERON:0007524,3.75e-09,73;UBERON:0005256,8.36e-09,122;UBERON:0003077,1.02e-08,72;UBERON:0007285,1.02e-08,72;UBERON:0000483,1.07e-08,306;UBERON:0002329,1.49e-08,71;UBERON:0003059,1.49e-08,71;UBERON:0007282,1.49e-08,71;UBERON:0004290,1.49e-08,71;UBERON:0009618,1.49e-08,71;UBERON:0001134,1.92e-08,62;UBERON:0002036,1.92e-08,62;UBERON:0003082,1.92e-08,62;UBERON:0002385,3.18e-08,64;UBERON:0001015,3.18e-08,64;UBERON:0000383,3.18e-08,64;UBERON:0002204,5.82e-08,167;UBERON:0003104,6.36e-08,160;UBERON:0009142,6.36e-08,160;UBERON:0010314,1.63e-07,132;UBERON:0006876,7.22e-07,11 | |||
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| |||
|short_description=p4@NEK6 | |||
}} |
Revision as of 07:23, 14 September 2013
Short description: | p4@NEK6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_NEK6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000545174, NM_001166168_5end |
EntrezGene: | NEK6 |
HGNC: | 7749 |
UniProt: | Q9HC98 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.92e-11 | 76 |
mesodermal cell | 3.62e-11 | 121 |
multi fate stem cell | 2.75e-10 | 427 |
somatic stem cell | 3.13e-09 | 433 |
muscle precursor cell | 7.52e-09 | 58 |
myoblast | 7.52e-09 | 58 |
multi-potent skeletal muscle stem cell | 7.52e-09 | 58 |
muscle cell | 1.64e-08 | 55 |
stem cell | 6.26e-08 | 441 |
smooth muscle cell | 7.35e-07 | 43 |
smooth muscle myoblast | 7.35e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 1.13e-09 | 78 |
cell layer | 2.58e-09 | 309 |
dense mesenchyme tissue | 3.75e-09 | 73 |
trunk mesenchyme | 8.36e-09 | 122 |
paraxial mesoderm | 1.02e-08 | 72 |
presumptive paraxial mesoderm | 1.02e-08 | 72 |
epithelium | 1.07e-08 | 306 |
somite | 1.49e-08 | 71 |
presomitic mesoderm | 1.49e-08 | 71 |
presumptive segmental plate | 1.49e-08 | 71 |
dermomyotome | 1.49e-08 | 71 |
trunk paraxial mesoderm | 1.49e-08 | 71 |
skeletal muscle tissue | 1.92e-08 | 62 |
striated muscle tissue | 1.92e-08 | 62 |
myotome | 1.92e-08 | 62 |
muscle tissue | 3.18e-08 | 64 |
musculature | 3.18e-08 | 64 |
musculature of body | 3.18e-08 | 64 |
musculoskeletal system | 5.82e-08 | 167 |
mesenchyme | 6.36e-08 | 160 |
entire embryonic mesenchyme | 6.36e-08 | 160 |
structure with developmental contribution from neural crest | 1.63e-07 | 132 |
vasculature of organ | 7.22e-07 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.