FFCP PHASE1:Hg19::chr9:113018779..113018796,-: Difference between revisions
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{{FFCP | 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43709351097,129.845385414829,157.94316563555,72.6263578557753,95.5282809734247,304.648167925975,21.9235651103484,2204.77184077818,441.902957444427,1074.00288907767,30.7015695961077,21.2544864488377,15.4844843285437,32.2032691857985,42.0959732690269,18.5341436604104,34.5557881652161,28.5538840518309,593.008515183197,2361.28198252837,563.492654658598,242.60389891571,237.601045476045,252.671732937997,124.521555044788,67.6892955143315,121.628156428223,75.80685908961,92.4530631519421,618.730304353145,616.412023438862,35.5247695092756,35.929592536237,11.3677738075651,24.2248394940724,43.2110099124393,106.362006770293,75.4240991151727,100.598351773703,471.954407700665,14.4639495687137,7.0619581665953,16.9950369186257,7.51285231459282,166.671753535598,200.276670371944,549.962046265801,120.98612469876,27.4930193492709,714.718155825356,125.135327128578,55.730095923865,22.6246449479043,179.654456684139,57.5289993920982,267.534285519872,117.049163532327,27.661422596366,62.8894174696252,165.411548298842,35.2932292774236,344.735886834009,271.867607381904,224.836234332732,47.6969166651723,127.777525569622,184.597921139682,185.424368755927,62.2378963780666,240.333105102709,320.443196391242,402.281893309499,95.6363941871124,1492.66875282062,1151.27096560757,22.0125804643884,57.6964974532108,42.9131339595134,88.3994007367634,182.940660427367,47.7481860387284,22.7137373385156,683.323796335708,7.36601462194375,81.368972682437,273.042171385908,194.080889727514,308.998463709521,64.2288602995232,91.2068237283292,47.3103405747018,42.4776352467733,63.39835913751,183.351356748154,67.9503726994341,50.6638999472317,288.829940623045,656.899940130214,175.388751242699,666.885998553677,127.078531554894,96.7918787983581,37.2682916193773,190.272504004981,27.2645875665568,43.1987183436974,154.475837430497,281.972223770398,674.314242173239,514.392982365185,99.4191427700422,178.539944588678,142.409115136855,262.825214245087,45.9613937056764,102.646602780422,301.601169768727,41.2993905289405,18.2215608506201,32.3376081388924,15.1012173958367,740.348385160206,61.8967521805725,123.88152906546,82.4352205848993,241.756295723803,69.3754025231997,56.7949300972596,2451.27286457189,298.08520524528,406.53699199605,317.442481067986,152.69110365462,386.828332439351,225.62160918549,206.587342047026,216.568562278981,77.4315109931399,69.0664159633195,411.372036277212,34.6193522576467,49.9159008105745,263.507300673257|short_description=p1@TXN}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=7295 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12435 | |||
|TSSclassifier=S | |||
|UniProt=P10599,O60744 | |||
|association_with_transcript=-1bp_to_uc004bep.1,uc004beq.1_5end | |||
|coexpression_cluster_id=C61 | |||
|description=CAGE_peak_1_at_TXN_5end | |||
|id=chr9:113018779..113018796,- | |||
|ontology_enrichment_celltype=CL:0000012!7.66e-43!682;CL:0000548!4.07e-42!679;CL:0000004!4.07e-42!679;CL:0000255!4.07e-42!679;CL:0000144!6.08e-27!625;CL:0000003!1.42e-24!722;CL:0002371!4.16e-24!591;CL:0000063!4.44e-24!578;CL:0000723!1.64e-13!436;CL:0000048!6.48e-13!430;CL:0000034!1.69e-12!444;CL:0000066!1.74e-10!254;CL:0000220!2.02e-09!246;CL:0002321!7.01e-09!248;CL:0000055!1.96e-08!180;CL:0002320!3.90e-08!365;CL:0000451!1.54e-07!10;CL:0000134!1.93e-07!358;CL:0000057!2.93e-07!75;CL:0000680!3.45e-07!57;CL:0000056!3.45e-07!57;CL:0000355!3.45e-07!57;CL:0000222!6.23e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000451;1.54e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,8.76e-13,433;CL:0000048,3.31e-12,427;CL:0000034,8.45e-12,441;CL:0000066,1.50e-10,253;CL:0002321,7.27e-09,250;CL:0002320,1.23e-07,361;CL:0000451,1.54e-07,10;CL:0000057,4.68e-07,76;CL:0000680,4.89e-07,58;CL:0000056,4.89e-07,58;CL:0000355,4.89e-07,58;CL:0000134,5.75e-07,354;CL:0000222,7.03e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!1.13e-12!448;UBERON:0004120!1.13e-12!448;UBERON:0006603!1.13e-12!448;UBERON:0002204!6.78e-11!167;UBERON:0004119!1.17e-07!169;UBERON:0000925!1.17e-07!169;UBERON:0006595!1.17e-07!169;UBERON:0000486!1.67e-07!82;UBERON:0002384!1.84e-07!375;UBERON:0000914!6.40e-07!83;UBERON:0002329!6.40e-07!83;UBERON:0003077!6.40e-07!83;UBERON:0003059!6.40e-07!83;UBERON:0007282!6.40e-07!83;UBERON:0009618!6.40e-07!83;UBERON:0007285!6.40e-07!83;UBERON:0001007!6.62e-07!155;UBERON:0001555!6.62e-07!155;UBERON:0007026!6.62e-07!155;UBERON:0003104!7.26e-07!238;UBERON:0009142!7.26e-07!238 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.03e-10,167;UBERON:0003102,1.23e-07,99;UBERON:0004119,1.90e-07,160;UBERON:0000925,1.90e-07,160;UBERON:0006595,1.90e-07,160;UBERON:0000486,2.19e-07,83;UBERON:0002384,5.51e-07,371;UBERON:0001007,9.01e-07,145;UBERON:0001555,9.01e-07,145;UBERON:0007026,9.01e-07,145 | |||
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| |||
|short_description=p1@TXN | |||
}} |
Revision as of 06:55, 14 September 2013
Short description: | p1@TXN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TXN_5end |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | -1bp_to_uc004bep.1, uc004beq.1_5end |
EntrezGene: | TXN |
HGNC: | 12435 |
UniProt: | P10599O60744 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 8.76e-13 | 433 |
multi fate stem cell | 3.31e-12 | 427 |
stem cell | 8.45e-12 | 441 |
epithelial cell | 1.50e-10 | 253 |
embryonic cell | 7.27e-09 | 250 |
connective tissue cell | 1.23e-07 | 361 |
dendritic cell | 1.54e-07 | 10 |
fibroblast | 4.68e-07 | 76 |
muscle precursor cell | 4.89e-07 | 58 |
myoblast | 4.89e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.89e-07 | 58 |
mesenchymal cell | 5.75e-07 | 354 |
mesodermal cell | 7.03e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.03e-10 | 167 |
surface structure | 1.23e-07 | 99 |
endoderm-derived structure | 1.90e-07 | 160 |
endoderm | 1.90e-07 | 160 |
presumptive endoderm | 1.90e-07 | 160 |
multilaminar epithelium | 2.19e-07 | 83 |
connective tissue | 5.51e-07 | 371 |
digestive system | 9.01e-07 | 145 |
digestive tract | 9.01e-07 | 145 |
primitive gut | 9.01e-07 | 145 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.