FFCP PHASE1:Hg19::chr9:102590781..102590789,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8013|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=7982|TSSclassifier=W|UniProt=Q92570|association_with_transcript=-435bp_to_D85242_5end|coexpression_cluster_id=C17|description=CAGE_peak_14_at_NR4A3_5end|id=chr9:102590781..102590789,+|ontology_enrichment_celltype=CL:0000738!7.26e-13!140;CL:0000766!9.14e-11!76;CL:0000557!7.66e-10!71;CL:0000037!1.04e-09!172;CL:0000566!1.04e-09!172;CL:0002032!4.51e-09!165;CL:0000837!4.51e-09!165;CL:0002031!5.21e-09!124;CL:0000988!5.93e-09!182;CL:0000763!6.01e-09!112;CL:0000049!6.01e-09!112;CL:0000839!2.38e-08!70;CL:0002057!4.22e-08!42;CL:0000860!1.76e-07!45;CL:0002009!1.95e-07!65;CL:0002087!5.17e-07!119|ontology_enrichment_celltype_v019=CL:0000771;4.52e-50;2!CL:0000097;4.21e-21;5!CL:0000094;1.07e-13;8!CL:0000163;2.19e-12;9!CL:0000081;2.37e-10;11|ontology_enrichment_celltype_v019_2=CL:0000771,4.52e-50,2;CL:0000097,4.21e-21,5;CL:0002028,4.21e-21,5;CL:0000094,1.07e-13,8;CL:0000163,2.19e-12,9;CL:0000081,2.37e-10,11|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2513!1.63e-07!1;DOID:0060060!3.62e-07!1;DOID:0060061!3.62e-07!1;DOID:8691!3.62e-07!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.71e-08!80;UBERON:0001474!9.48e-08!86;UBERON:0002390!2.09e-07!102;UBERON:0003061!2.09e-07!102;UBERON:0002336!6.97e-07!1;UBERON:0001018!6.97e-07!1;UBERON:0002473!6.97e-07!1;UBERON:0005340!6.97e-07!1;UBERON:0002316!6.97e-07!1;UBERON:0003544!6.97e-07!1;UBERON:0001020!6.97e-07!1;UBERON:0005970!6.97e-07!1;UBERON:0002437!6.97e-07!1|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0.28769239232215,0,0,0.689491361473237,0,0,0,0.272906150057846,0,0.306083892370903,0,0.639337125799041,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522389211897802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.36060152002293,0,0,0.288239906833923,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p14@NR4A3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=8013 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7982 | |||
|TSSclassifier=W | |||
|UniProt=Q92570 | |||
|association_with_transcript=-435bp_to_D85242_5end | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_14_at_NR4A3_5end | |||
|id=chr9:102590781..102590789,+ | |||
|ontology_enrichment_celltype=CL:0000738!7.26e-13!140;CL:0000766!9.14e-11!76;CL:0000557!7.66e-10!71;CL:0000037!1.04e-09!172;CL:0000566!1.04e-09!172;CL:0002032!4.51e-09!165;CL:0000837!4.51e-09!165;CL:0002031!5.21e-09!124;CL:0000988!5.93e-09!182;CL:0000763!6.01e-09!112;CL:0000049!6.01e-09!112;CL:0000839!2.38e-08!70;CL:0002057!4.22e-08!42;CL:0000860!1.76e-07!45;CL:0002009!1.95e-07!65;CL:0002087!5.17e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000771;4.52e-50;2!CL:0000097;4.21e-21;5!CL:0000094;1.07e-13;8!CL:0000163;2.19e-12;9!CL:0000081;2.37e-10;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,4.52e-50,2;CL:0000097,4.21e-21,5;CL:0002028,4.21e-21,5;CL:0000094,1.07e-13,8;CL:0000163,2.19e-12,9;CL:0000081,2.37e-10,11 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2513!1.63e-07!1;DOID:0060060!3.62e-07!1;DOID:0060061!3.62e-07!1;DOID:8691!3.62e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.71e-08!80;UBERON:0001474!9.48e-08!86;UBERON:0002390!2.09e-07!102;UBERON:0003061!2.09e-07!102;UBERON:0002336!6.97e-07!1;UBERON:0001018!6.97e-07!1;UBERON:0002473!6.97e-07!1;UBERON:0005340!6.97e-07!1;UBERON:0002316!6.97e-07!1;UBERON:0003544!6.97e-07!1;UBERON:0001020!6.97e-07!1;UBERON:0005970!6.97e-07!1;UBERON:0002437!6.97e-07!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p14@NR4A3 | |||
}} |
Revision as of 06:41, 14 September 2013
Short description: | p14@NR4A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_NR4A3_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | -435bp_to_D85242_5end |
EntrezGene: | NR4A3 |
HGNC: | 7982 |
UniProt: | Q92570 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 4.52e-50 | 2 |
mast cell | 4.21e-21 | 5 |
basophil mast progenitor cell | 4.21e-21 | 5 |
granulocyte | 1.07e-13 | 8 |
endocrine cell | 2.19e-12 | 9 |
blood cell | 2.37e-10 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.