FFCP PHASE1:Hg19::chr9:100264007..100264012,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7111|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11871|TSSclassifier=S|UniProt=P28289|association_with_transcript=86bp_to_ENST00000259365,NM_003275,uc004axk.1_5end|coexpression_cluster_id=C2934|description=CAGE_peak_5_at_TMOD1_5end|id=chr9:100264007..100264012,+|ontology_enrichment_celltype=CL:0002274!9.39e-08!5;CL:0000457!9.39e-08!5;CL:0002191!9.39e-08!5;CL:0000097!9.39e-08!5;CL:0000831!9.39e-08!5;CL:0002028!9.39e-08!5|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;6.84e-25;3!UBERON:0005062;1.88e-18;4!UBERON:0007284;1.88e-18;4!UBERON:0010226;1.96e-09;1!UBERON:0004140;6.21e-09;1!UBERON:0004874;6.21e-09;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:114;3.76e-16;2!DOID:178;6.21e-09;1!DOID:326;6.21e-09;1!DOID:3978;6.21e-09;1!DOID:3394;6.21e-09;1!DOID:5844;6.21e-09;1!DOID:1287;1.57e-08;4|ontology_enrichment_disease_v019_2=DOID:114,1.73e-16,2;DOID:178,4.54e-09,1;DOID:326,4.54e-09,1;DOID:3978,4.54e-09,1;DOID:3394,4.54e-09,1;DOID:5844,4.54e-09,1;DOID:1287,1.07e-08,4|ontology_enrichment_uberon=UBERON:0007023!7.00e-64!115;UBERON:0001049!1.71e-25!57;UBERON:0005068!1.71e-25!57;UBERON:0006241!1.71e-25!57;UBERON:0007135!1.71e-25!57;UBERON:0001017!1.14e-21!82;UBERON:0005743!3.05e-21!86;UBERON:0003075!3.29e-21!86;UBERON:0007284!3.29e-21!86;UBERON:0000073!4.18e-20!94;UBERON:0001016!4.18e-20!94;UBERON:0002346!1.20e-19!90;UBERON:0002616!1.29e-19!59;UBERON:0000955!3.01e-19!69;UBERON:0006238!3.01e-19!69;UBERON:0001893!8.32e-16!34;UBERON:0002780!1.09e-15!41;UBERON:0001890!1.09e-15!41;UBERON:0006240!1.09e-15!41;UBERON:0002020!1.22e-15!34;UBERON:0003528!1.22e-15!34;UBERON:0003080!3.89e-15!42;UBERON:0002791!8.48e-15!33;UBERON:0002619!1.21e-14!22;UBERON:0001950!1.51e-14!20;UBERON:0001869!5.71e-14!32;UBERON:0003076!2.01e-12!15;UBERON:0003057!2.01e-12!15;UBERON:0000956!2.36e-12!25;UBERON:0000203!2.36e-12!25;UBERON:0004121!5.86e-11!169;UBERON:0000153!1.36e-10!129;UBERON:0007811!1.36e-10!129;UBERON:0000924!2.27e-10!173;UBERON:0006601!2.27e-10!173;UBERON:0000033!3.94e-10!123;UBERON:0003056!4.32e-09!61;UBERON:0004733!4.57e-09!12;UBERON:0002028!4.57e-09!12;UBERON:0007277!4.57e-09!12;UBERON:0004732!3.40e-08!13;UBERON:0002298!4.67e-08!8;UBERON:0000062!9.08e-08!511;UBERON:0002021!1.02e-07!5;UBERON:0004111!1.93e-07!241;UBERON:0000468!2.73e-07!659;UBERON:0000477!4.65e-07!286;UBERON:0000467!4.81e-07!625;UBERON:0000480!5.54e-07!626;UBERON:0000025!8.55e-07!194|ontology_enrichment_uberon_v019=UBERON:0003978;2.16e-24;3!UBERON:0000946;2.16e-24;3!UBERON:0007100;8.80e-19;25!UBERON:0002133;7.28e-17;2!UBERON:0002021;3.03e-14;5!UBERON:0002037;9.82e-13;6!UBERON:0004151;1.21e-11;3!UBERON:0001723;2.57e-11;3!UBERON:0001033;2.57e-11;3!UBERON:0004733;7.93e-11;12!UBERON:0002028;7.93e-11;12!UBERON:0004732;5.27e-10;13!UBERON:0002084;1.96e-09;1!UBERON:0000996;1.96e-09;1!UBERON:0002082;1.96e-09;1!UBERON:0002135;2.70e-09;1!UBERON:0002146;2.70e-09;1!UBERON:0002134;2.70e-09;1!UBERON:0005208;2.70e-09;1!UBERON:0005623;2.70e-09;1!UBERON:0004145;2.70e-09;1!UBERON:0005946;2.70e-09;1!UBERON:0005965;2.70e-09;1!UBERON:0002078;2.70e-09;1!UBERON:0002902;6.21e-09;1!UBERON:0006834;6.21e-09;1!UBERON:0000989;6.21e-09;1!UBERON:0008811;6.21e-09;1!UBERON:0009899;6.21e-09;1!UBERON:0000948;8.28e-09;22!UBERON:0002680;1.19e-08;9!UBERON:0001895;1.19e-08;9!UBERON:0010313;1.10e-07;10!UBERON:0007023;2.68e-07;114|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.81e-26,114;UBERON:0003978,2.44e-24,3;UBERON:0009751,2.44e-24,3;UBERON:0000946,2.44e-24,3;UBERON:0002523,2.44e-24,3;UBERON:0005983,2.44e-24,3;UBERON:0002165,2.44e-24,3;UBERON:0002062,2.44e-24,3;UBERON:0007280,2.44e-24,3;UBERON:0007100,2.08e-17,27;UBERON:0002133,8.55e-17,2;UBERON:0002021,3.33e-14,5;UBERON:0003076,5.93e-13,15;UBERON:0003057,5.93e-13,15;UBERON:0002037,9.84e-13,6;UBERON:0006215,9.84e-13,6;UBERON:0003103,6.48e-12,68;UBERON:0010314,6.89e-12,132;UBERON:0004151,1.34e-11,3;UBERON:0003075,2.79e-11,82;UBERON:0007284,2.79e-11,82;UBERON:0001723,2.93e-11,3;UBERON:0001033,2.93e-11,3;UBERON:0010056,2.93e-11,3;UBERON:0004733,9.25e-11,12;UBERON:0002028,9.25e-11,12;UBERON:0007277,9.25e-11,12;UBERON:0004797,9.35e-11,7;UBERON:0002346,1.15e-10,86;UBERON:0004732,6.08e-10,13;UBERON:0001049,1.46e-09,56;UBERON:0005068,1.46e-09,56;UBERON:0006241,1.46e-09,56;UBERON:0007135,1.46e-09,56;UBERON:0000996,1.89e-09,1;UBERON:0002084,2.04e-09,1;UBERON:0002082,2.04e-09,1;UBERON:0010226,2.04e-09,1;UBERON:0002146,2.60e-09,1;UBERON:0005623,2.60e-09,1;UBERON:0002135,2.82e-09,1;UBERON:0002134,3.05e-09,1;UBERON:0005208,3.05e-09,1;UBERON:0005946,3.05e-09,1;UBERON:0005965,3.05e-09,1;UBERON:0002078,3.05e-09,1;UBERON:0000989,3.31e-09,1;UBERON:0008811,3.31e-09,1;UBERON:0006258,3.31e-09,1;UBERON:0005876,3.31e-09,1;UBERON:0004874,3.31e-09,1;UBERON:0006834,6.22e-09,1;UBERON:0002902,7.85e-09,1;UBERON:0009899,7.85e-09,1;UBERON:0002680,1.20e-08,9;UBERON:0001895,1.20e-08,9;UBERON:0010092,1.20e-08,9;UBERON: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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7111 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11871 | |||
|TSSclassifier=S | |||
|UniProt=P28289 | |||
|association_with_transcript=86bp_to_ENST00000259365,NM_003275,uc004axk.1_5end | |||
|coexpression_cluster_id=C2934 | |||
|description=CAGE_peak_5_at_TMOD1_5end | |||
|id=chr9:100264007..100264012,+ | |||
|ontology_enrichment_celltype=CL:0002274!9.39e-08!5;CL:0000457!9.39e-08!5;CL:0002191!9.39e-08!5;CL:0000097!9.39e-08!5;CL:0000831!9.39e-08!5;CL:0002028!9.39e-08!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.84e-25;3!UBERON:0005062;1.88e-18;4!UBERON:0007284;1.88e-18;4!UBERON:0010226;1.96e-09;1!UBERON:0004140;6.21e-09;1!UBERON:0004874;6.21e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;3.76e-16;2!DOID:178;6.21e-09;1!DOID:326;6.21e-09;1!DOID:3978;6.21e-09;1!DOID:3394;6.21e-09;1!DOID:5844;6.21e-09;1!DOID:1287;1.57e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.73e-16,2;DOID:178,4.54e-09,1;DOID:326,4.54e-09,1;DOID:3978,4.54e-09,1;DOID:3394,4.54e-09,1;DOID:5844,4.54e-09,1;DOID:1287,1.07e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.00e-64!115;UBERON:0001049!1.71e-25!57;UBERON:0005068!1.71e-25!57;UBERON:0006241!1.71e-25!57;UBERON:0007135!1.71e-25!57;UBERON:0001017!1.14e-21!82;UBERON:0005743!3.05e-21!86;UBERON:0003075!3.29e-21!86;UBERON:0007284!3.29e-21!86;UBERON:0000073!4.18e-20!94;UBERON:0001016!4.18e-20!94;UBERON:0002346!1.20e-19!90;UBERON:0002616!1.29e-19!59;UBERON:0000955!3.01e-19!69;UBERON:0006238!3.01e-19!69;UBERON:0001893!8.32e-16!34;UBERON:0002780!1.09e-15!41;UBERON:0001890!1.09e-15!41;UBERON:0006240!1.09e-15!41;UBERON:0002020!1.22e-15!34;UBERON:0003528!1.22e-15!34;UBERON:0003080!3.89e-15!42;UBERON:0002791!8.48e-15!33;UBERON:0002619!1.21e-14!22;UBERON:0001950!1.51e-14!20;UBERON:0001869!5.71e-14!32;UBERON:0003076!2.01e-12!15;UBERON:0003057!2.01e-12!15;UBERON:0000956!2.36e-12!25;UBERON:0000203!2.36e-12!25;UBERON:0004121!5.86e-11!169;UBERON:0000153!1.36e-10!129;UBERON:0007811!1.36e-10!129;UBERON:0000924!2.27e-10!173;UBERON:0006601!2.27e-10!173;UBERON:0000033!3.94e-10!123;UBERON:0003056!4.32e-09!61;UBERON:0004733!4.57e-09!12;UBERON:0002028!4.57e-09!12;UBERON:0007277!4.57e-09!12;UBERON:0004732!3.40e-08!13;UBERON:0002298!4.67e-08!8;UBERON:0000062!9.08e-08!511;UBERON:0002021!1.02e-07!5;UBERON:0004111!1.93e-07!241;UBERON:0000468!2.73e-07!659;UBERON:0000477!4.65e-07!286;UBERON:0000467!4.81e-07!625;UBERON:0000480!5.54e-07!626;UBERON:0000025!8.55e-07!194 | |||
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|short_description=p5@TMOD1 | |||
}} |
Revision as of 06:34, 14 September 2013
Short description: | p5@TMOD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_TMOD1_5end |
Coexpression cluster: | C2934_heart_left_Mast_Whole_skeletal_tongue_neuroblastoma |
Association with transcript: | 86bp_to_ENST00000259365, NM_003275, uc004axk.1_5end |
EntrezGene: | TMOD1 |
HGNC: | 11871 |
UniProt: | P28289 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 1.73e-16 | 2 |
vascular disease | 4.54e-09 | 1 |
ischemia | 4.54e-09 | 1 |
extrinsic cardiomyopathy | 4.54e-09 | 1 |
myocardial ischemia | 4.54e-09 | 1 |
myocardial infarction | 4.54e-09 | 1 |
cardiovascular system disease | 1.07e-08 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.