FFCP PHASE1:Hg19::chr9:92020896..92020944,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10507|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10732|TSSclassifier=S|UniProt=C9JYS7|association_with_transcript=-55bp_to_ENST00000433650_5end|description=CAGE_peak_6_at_SEMA4D_5end|id=chr9:92020896..92020944,-|ontology_enrichment_celltype=CL:0002194!2.42e-37!63;CL:0000576!2.42e-37!63;CL:0000040!2.42e-37!63;CL:0000559!2.42e-37!63;CL:0002087!2.82e-37!119;CL:0000766!1.04e-36!76;CL:0002057!2.07e-36!42;CL:0000839!2.90e-36!70;CL:0002009!1.20e-35!65;CL:0000738!1.29e-34!140;CL:0000557!4.69e-34!71;CL:0002031!9.24e-34!124;CL:0000860!5.27e-33!45;CL:0000037!7.66e-27!172;CL:0000566!7.66e-27!172;CL:0002032!1.78e-26!165;CL:0000837!1.78e-26!165;CL:0000988!1.12e-24!182;CL:0000763!1.35e-22!112;CL:0000049!1.35e-22!112;CL:0000945!3.45e-13!24;CL:0000826!3.45e-13!24|ontology_enrichment_celltype_v019=CL:0000860;1.87e-45;33!CL:0002057;1.87e-45;33!CL:0000473;3.40e-36;39!CL:0000234;3.40e-36;39!CL:0000576;1.16e-33;48!CL:0000766;1.67e-16;69!CL:0000945;3.04e-16;24!CL:0002087;1.91e-13;104!CL:0000738;1.20e-11;136!CL:0000763;8.89e-09;100!CL:0000988;1.70e-07;177|ontology_enrichment_celltype_v019_2=CL:0002194,3.93e-56,59;CL:0000576,3.93e-56,59;CL:0000040,3.93e-56,59;CL:0000559,3.93e-56,59;CL:0002009,5.16e-54,61;CL:0002087,2.78e-49,115;CL:0000839,2.85e-49,66;CL:0000557,2.09e-48,67;CL:0000860,8.12e-48,42;CL:0002057,8.12e-48,42;CL:0000473,9.69e-48,48;CL:0000234,9.69e-48,48;CL:0000766,1.91e-47,72;CL:0002031,9.27e-47,120;CL:0000738,4.46e-42,136;CL:0002032,9.60e-34,161;CL:0000837,9.60e-34,161;CL:0000037,7.46e-32,168;CL:0000988,1.21e-29,177;CL:0000763,1.37e-28,108;CL:0000049,1.37e-28,108;CL:0000945,3.32e-16,24;CL:0000826,3.32e-16,24;CL:0000134,9.60e-10,354;CL:0002320,2.45e-09,361;CL:0000219,6.53e-08,386;CL:0000048,7.99e-08,427;CL:0000723,1.49e-07,433;CL:0000034,3.32e-07,441|ontology_enrichment_development_v019=CL:0002057;1.96e-34;42!CL:0000049;1.85e-09;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!3.58e-35!112;UBERON:0002390!3.75e-33!102;UBERON:0003061!3.75e-33!102;UBERON:0007023!1.06e-30!115;UBERON:0002371!9.92e-30!80;UBERON:0001474!2.16e-26!86;UBERON:0002405!2.26e-24!115;UBERON:0004765!8.14e-21!101;UBERON:0001434!8.14e-21!101;UBERON:0001049!3.92e-18!57;UBERON:0005068!3.92e-18!57;UBERON:0006241!3.92e-18!57;UBERON:0007135!3.92e-18!57;UBERON:0002020!2.82e-14!34;UBERON:0003528!2.82e-14!34;UBERON:0001893!7.07e-14!34;UBERON:0002616!1.24e-13!59;UBERON:0002791!2.13e-13!33;UBERON:0003080!2.60e-13!42;UBERON:0002780!1.43e-12!41;UBERON:0001890!1.43e-12!41;UBERON:0006240!1.43e-12!41;UBERON:0001869!3.63e-12!32;UBERON:0001017!2.83e-11!82;UBERON:0005743!6.03e-11!86;UBERON:0000955!9.86e-11!69;UBERON:0006238!9.86e-11!69;UBERON:0003075!1.77e-10!86;UBERON:0007284!1.77e-10!86;UBERON:0002619!2.75e-10!22;UBERON:0003081!4.87e-10!216;UBERON:0002346!1.57e-09!90;UBERON:0002298!2.68e-09!8;UBERON:0000073!6.90e-09!94;UBERON:0001016!6.90e-09!94;UBERON:0001950!7.53e-09!20;UBERON:0000956!1.49e-08!25;UBERON:0000203!1.49e-08!25;UBERON:0002308!6.73e-08!9;UBERON:0000125!6.73e-08!9;UBERON:0002420!8.99e-08!9;UBERON:0007245!8.99e-08!9;UBERON:0010009!8.99e-08!9;UBERON:0010011!8.99e-08!9;UBERON:0000454!8.99e-08!9;UBERON:0003056!1.67e-07!61;UBERON:0002204!2.09e-07!167|ontology_enrichment_uberon_v019=UBERON:0002465;2.38e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0002405,8.17e-49,93;UBERON:0002371,2.73e-44,76;UBERON:0002193,8.55e-43,108;UBERON:0001474,2.18e-40,82;UBERON:0002390,1.52e-36,98;UBERON:0003061,1.52e-36,98;UBERON:0004765,5.47e-36,90;UBERON:0001434,1.79e-31,100;UBERON:0002204,3.35e-15,167;UBERON:0003081,9.85e-13,203;UBERON:0002384,8.78e-09,371;UBERON:0002465,3.01e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.12632391038937,3.7766271146975,2.44003422072406,0.786728553697808,0.383829398097213,0.154816123316076,0,0,0,0.154934401160603,1.56386155736164,0,0.553995408531877,1.20326668482085,1.51907609501096,0,0.32389366601898,0,1.16318591023652,0.377875943688809,1.94067248950253,2.09186133215116,1.23350366406548,1.23882548358041,6.32923263108731,4.35473201099471,4.96612682766029,0.689491361473237,0,0,0,1.63743690034707,0.898893937780338,3.36692281607993,0.641858054152187,1.27867425159808,7.91643120448119,6.18337338627059,9.80316926225197,2.90209238628584,2.26954089876456,4.35975574296902,3.26623264833766,1.0429658368404,2.17188844705117,5.44859552370032,1.84138817993782,2.84816148696796,0.211255286311942,0.212604299965044,1.25795187305026,0.561643155732475,0.901061357049038,2.57160938715328,0,0.19891667719909,0.182664153764634,3.51992488922645,0.546138611262131,0,0.853460445133014,0,0,0.661044872784862,0,0,1.17447437874188,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,9.08732702233113,9.0547463395619,10.7695948020281,0,0,0,0.198762407366705,0.860234595106124,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10507 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10732 | |||
|TSSclassifier=S | |||
|UniProt=C9JYS7 | |||
|association_with_transcript=-55bp_to_ENST00000433650_5end | |||
|description=CAGE_peak_6_at_SEMA4D_5end | |||
|id=chr9:92020896..92020944,- | |||
|ontology_enrichment_celltype=CL:0002194!2.42e-37!63;CL:0000576!2.42e-37!63;CL:0000040!2.42e-37!63;CL:0000559!2.42e-37!63;CL:0002087!2.82e-37!119;CL:0000766!1.04e-36!76;CL:0002057!2.07e-36!42;CL:0000839!2.90e-36!70;CL:0002009!1.20e-35!65;CL:0000738!1.29e-34!140;CL:0000557!4.69e-34!71;CL:0002031!9.24e-34!124;CL:0000860!5.27e-33!45;CL:0000037!7.66e-27!172;CL:0000566!7.66e-27!172;CL:0002032!1.78e-26!165;CL:0000837!1.78e-26!165;CL:0000988!1.12e-24!182;CL:0000763!1.35e-22!112;CL:0000049!1.35e-22!112;CL:0000945!3.45e-13!24;CL:0000826!3.45e-13!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.87e-45;33!CL:0002057;1.87e-45;33!CL:0000473;3.40e-36;39!CL:0000234;3.40e-36;39!CL:0000576;1.16e-33;48!CL:0000766;1.67e-16;69!CL:0000945;3.04e-16;24!CL:0002087;1.91e-13;104!CL:0000738;1.20e-11;136!CL:0000763;8.89e-09;100!CL:0000988;1.70e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,3.93e-56,59;CL:0000576,3.93e-56,59;CL:0000040,3.93e-56,59;CL:0000559,3.93e-56,59;CL:0002009,5.16e-54,61;CL:0002087,2.78e-49,115;CL:0000839,2.85e-49,66;CL:0000557,2.09e-48,67;CL:0000860,8.12e-48,42;CL:0002057,8.12e-48,42;CL:0000473,9.69e-48,48;CL:0000234,9.69e-48,48;CL:0000766,1.91e-47,72;CL:0002031,9.27e-47,120;CL:0000738,4.46e-42,136;CL:0002032,9.60e-34,161;CL:0000837,9.60e-34,161;CL:0000037,7.46e-32,168;CL:0000988,1.21e-29,177;CL:0000763,1.37e-28,108;CL:0000049,1.37e-28,108;CL:0000945,3.32e-16,24;CL:0000826,3.32e-16,24;CL:0000134,9.60e-10,354;CL:0002320,2.45e-09,361;CL:0000219,6.53e-08,386;CL:0000048,7.99e-08,427;CL:0000723,1.49e-07,433;CL:0000034,3.32e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.96e-34;42!CL:0000049;1.85e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.58e-35!112;UBERON:0002390!3.75e-33!102;UBERON:0003061!3.75e-33!102;UBERON:0007023!1.06e-30!115;UBERON:0002371!9.92e-30!80;UBERON:0001474!2.16e-26!86;UBERON:0002405!2.26e-24!115;UBERON:0004765!8.14e-21!101;UBERON:0001434!8.14e-21!101;UBERON:0001049!3.92e-18!57;UBERON:0005068!3.92e-18!57;UBERON:0006241!3.92e-18!57;UBERON:0007135!3.92e-18!57;UBERON:0002020!2.82e-14!34;UBERON:0003528!2.82e-14!34;UBERON:0001893!7.07e-14!34;UBERON:0002616!1.24e-13!59;UBERON:0002791!2.13e-13!33;UBERON:0003080!2.60e-13!42;UBERON:0002780!1.43e-12!41;UBERON:0001890!1.43e-12!41;UBERON:0006240!1.43e-12!41;UBERON:0001869!3.63e-12!32;UBERON:0001017!2.83e-11!82;UBERON:0005743!6.03e-11!86;UBERON:0000955!9.86e-11!69;UBERON:0006238!9.86e-11!69;UBERON:0003075!1.77e-10!86;UBERON:0007284!1.77e-10!86;UBERON:0002619!2.75e-10!22;UBERON:0003081!4.87e-10!216;UBERON:0002346!1.57e-09!90;UBERON:0002298!2.68e-09!8;UBERON:0000073!6.90e-09!94;UBERON:0001016!6.90e-09!94;UBERON:0001950!7.53e-09!20;UBERON:0000956!1.49e-08!25;UBERON:0000203!1.49e-08!25;UBERON:0002308!6.73e-08!9;UBERON:0000125!6.73e-08!9;UBERON:0002420!8.99e-08!9;UBERON:0007245!8.99e-08!9;UBERON:0010009!8.99e-08!9;UBERON:0010011!8.99e-08!9;UBERON:0000454!8.99e-08!9;UBERON:0003056!1.67e-07!61;UBERON:0002204!2.09e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0002465;2.38e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,8.17e-49,93;UBERON:0002371,2.73e-44,76;UBERON:0002193,8.55e-43,108;UBERON:0001474,2.18e-40,82;UBERON:0002390,1.52e-36,98;UBERON:0003061,1.52e-36,98;UBERON:0004765,5.47e-36,90;UBERON:0001434,1.79e-31,100;UBERON:0002204,3.35e-15,167;UBERON:0003081,9.85e-13,203;UBERON:0002384,8.78e-09,371;UBERON:0002465,3.01e-07,10 | |||
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|short_description=p6@SEMA4D | |||
}} |
Revision as of 09:44, 14 September 2013
Short description: | p6@SEMA4D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_SEMA4D_5end |
Coexpression cluster: | NA |
Association with transcript: | -55bp_to_ENST00000433650_5end |
EntrezGene: | SEMA4D |
HGNC: | 10732 |
UniProt: | C9JYS7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 3.93e-56 | 59 |
monocyte | 3.93e-56 | 59 |
monoblast | 3.93e-56 | 59 |
promonocyte | 3.93e-56 | 59 |
macrophage dendritic cell progenitor | 5.16e-54 | 61 |
nongranular leukocyte | 2.78e-49 | 115 |
myeloid lineage restricted progenitor cell | 2.85e-49 | 66 |
granulocyte monocyte progenitor cell | 2.09e-48 | 67 |
classical monocyte | 8.12e-48 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.12e-48 | 42 |
defensive cell | 9.69e-48 | 48 |
phagocyte | 9.69e-48 | 48 |
myeloid leukocyte | 1.91e-47 | 72 |
hematopoietic lineage restricted progenitor cell | 9.27e-47 | 120 |
leukocyte | 4.46e-42 | 136 |
hematopoietic oligopotent progenitor cell | 9.60e-34 | 161 |
hematopoietic multipotent progenitor cell | 9.60e-34 | 161 |
hematopoietic stem cell | 7.46e-32 | 168 |
hematopoietic cell | 1.21e-29 | 177 |
myeloid cell | 1.37e-28 | 108 |
common myeloid progenitor | 1.37e-28 | 108 |
lymphocyte of B lineage | 3.32e-16 | 24 |
pro-B cell | 3.32e-16 | 24 |
mesenchymal cell | 9.60e-10 | 354 |
connective tissue cell | 2.45e-09 | 361 |
motile cell | 6.53e-08 | 386 |
multi fate stem cell | 7.99e-08 | 427 |
somatic stem cell | 1.49e-07 | 433 |
stem cell | 3.32e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
immune system | 8.17e-49 | 93 |
bone marrow | 2.73e-44 | 76 |
hemolymphoid system | 8.55e-43 | 108 |
bone element | 2.18e-40 | 82 |
hematopoietic system | 1.52e-36 | 98 |
blood island | 1.52e-36 | 98 |
skeletal element | 5.47e-36 | 90 |
skeletal system | 1.79e-31 | 100 |
musculoskeletal system | 3.35e-15 | 167 |
lateral plate mesoderm | 9.85e-13 | 203 |
connective tissue | 8.78e-09 | 371 |
lymphoid system | 3.01e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.