FFCP PHASE1:Hg19::chr9:90345291..90345317,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C667|description=CAGE_peak_at_chr9:90345291..90345317,+|id=chr9:90345291..90345317,+|ontology_enrichment_celltype=CL:0002194!1.01e-15!63;CL:0000576!1.01e-15!63;CL:0000040!1.01e-15!63;CL:0000559!1.01e-15!63;CL:0002009!1.40e-14!65;CL:0000839!2.82e-13!70;CL:0002057!6.04e-13!42;CL:0000860!3.72e-12!45;CL:0000557!1.27e-11!71;CL:0000766!1.30e-09!76|ontology_enrichment_celltype_v019=CL:0000860;1.34e-51;33!CL:0002057;1.34e-51;33!CL:0000473;6.16e-49;39!CL:0000234;6.16e-49;39!CL:0000576;2.04e-26;48!CL:0000766;1.92e-16;69!CL:0000235;1.32e-09;6!CL:0000763;8.78e-09;100|ontology_enrichment_celltype_v019_2=CL:0000473,7.35e-51,48;CL:0000234,7.35e-51,48;CL:0002194,4.86e-43,59;CL:0000576,4.86e-43,59;CL:0000040,4.86e-43,59;CL:0000559,4.86e-43,59;CL:0000860,1.28e-42,42;CL:0002057,1.28e-42,42;CL:0002009,2.88e-41,61;CL:0000839,2.64e-37,66;CL:0000557,1.39e-36,67;CL:0000766,2.83e-33,72;CL:0000763,1.48e-18,108;CL:0000049,1.48e-18,108;CL:0002087,8.77e-17,115;CL:0002031,1.19e-15,120;CL:0000134,1.19e-14,354;CL:0002320,1.19e-14,361;CL:0000048,6.89e-14,427;CL:0000723,2.03e-13,433;CL:0000034,8.21e-13,441;CL:0000738,1.31e-12,136;CL:0000219,9.12e-12,386;CL:0000235,1.34e-09,6;CL:0002032,3.80e-09,161;CL:0000837,3.80e-09,161;CL:0000037,2.22e-08,168;CL:0000988,1.70e-07,177|ontology_enrichment_development_v019=CL:0002057;5.92e-32;42!CL:0000049;1.78e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.80e-12!80;UBERON:0001474!2.18e-11!86;UBERON:0000926!4.26e-11!448;UBERON:0004120!4.26e-11!448;UBERON:0006603!4.26e-11!448;UBERON:0002405!5.98e-11!115;UBERON:0002204!7.31e-11!167;UBERON:0004765!4.09e-10!101;UBERON:0001434!4.09e-10!101;UBERON:0000062!7.63e-08!511;UBERON:0000468!1.35e-07!659;UBERON:0000467!1.79e-07!625;UBERON:0000480!2.42e-07!626;UBERON:0002390!4.40e-07!102;UBERON:0003061!4.40e-07!102|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.60e-37,76;UBERON:0001474,2.12e-33,82;UBERON:0004765,6.36e-31,90;UBERON:0001434,8.86e-30,100;UBERON:0002405,1.14e-29,93;UBERON:0002390,5.19e-26,98;UBERON:0003061,5.19e-26,98;UBERON:0002193,7.10e-24,108;UBERON:0002204,1.30e-21,167;UBERON:0000926,1.02e-15,315;UBERON:0004120,1.02e-15,315;UBERON:0006603,1.02e-15,315;UBERON:0002384,1.72e-14,371;UBERON:0003081,6.09e-13,203|phase1_expression=0,2.35510576280081,0.140954404095971,0,0,0.872338524100369,0,1.89515962028049,1.30592814099919,0,0,0,0.263766978228454,0,0.331397375727916,0,1.20538905604795,0.730310090387373,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0.895661896959697,1.6194683300949,1.03030227053675,1.89017710413434,2.26725566213286,2.91100873425379,5.57829688573643,12.3350366406548,7.74265927237759,14.0969272237854,20.2366958157989,7.09446689665756,1.72372840368309,3.22742341791913,1.35426486594342,4.51781614902251,9.5517152520246,3.14612878223118,6.73384563215986,8.02322567690234,5.11469700639233,8.90598510504134,14.9597743216224,8.09827026012119,8.41606792022894,13.6172453925874,8.09668923694247,18.8436498942557,34.9393555341535,10.2078757011405,2.42159801053347,5.52416453981347,5.06339819905415,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,4.87613732627923,0.670700859703636,0.12786256184353,1.0843174571537,0,1.30361867064741,0,0.973269740605272,0.0945348171640679,0,0,0.0654895377488563,0,0,0.97364218096405,0.348259474598534,0.930705723632056,0,0,0,0,0.860234595106124,0,0.56530794192401,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0.17859945656816,0.44905874525234,0.225222960966644,0,0,0,0,0,0.436094052142534,0.496971951695318,0.25326102332916,0.397227542439656,0.573673241497627,1.41867352879343,0.560677600142307,1.06748995729705,0,0.622422070799533,0.134710672069688,0.653847612453835,0.151357427644931,0.576175924479999,0,1.5608003841516,1.1409436430889,1.94283284717341,0.117434498643765,0,0,0.408308342509787,0.122834317311768,0.413303124703062,1.18800285728205,0.741800787835671,0,0,0,0,0,0,0.30648779579902,0,0,0.358779271377724,0.213557388818567,0.211931901159562,0.600182192168805,0.206105058476878,0,0.18611685633159,0.506328996723799,0,0,0,0.323292113637624,0.710019185033229,0.10075209822764,0,0.193260853163297,0,0,0.243947412259191,0,0,0.10366105501537,0.252320850875628,0,0,0.643240938192885,0,0.464367928031979,0,0.354920400119532,0.168584690078102,0.241011029883482,0.220587945464788,0.217879444092406,0.237270619111097,0.134831308160164,0,0.769494313892781,0.738155454624648,0,0,0,1.26755034821831,2.94848165003288,3.54473944008842,0,0,0,0,0,0.201057944823262,0.0925884451585296,0,0,0,0,0,0,1.38895653772983,0.190254152234598,0,0,5.41677413392274,0.702012795417713,4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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C667 | |||
|description=CAGE_peak_at_chr9:90345291..90345317,+ | |||
|id=chr9:90345291..90345317,+ | |||
|ontology_enrichment_celltype=CL:0002194!1.01e-15!63;CL:0000576!1.01e-15!63;CL:0000040!1.01e-15!63;CL:0000559!1.01e-15!63;CL:0002009!1.40e-14!65;CL:0000839!2.82e-13!70;CL:0002057!6.04e-13!42;CL:0000860!3.72e-12!45;CL:0000557!1.27e-11!71;CL:0000766!1.30e-09!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.34e-51;33!CL:0002057;1.34e-51;33!CL:0000473;6.16e-49;39!CL:0000234;6.16e-49;39!CL:0000576;2.04e-26;48!CL:0000766;1.92e-16;69!CL:0000235;1.32e-09;6!CL:0000763;8.78e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,7.35e-51,48;CL:0000234,7.35e-51,48;CL:0002194,4.86e-43,59;CL:0000576,4.86e-43,59;CL:0000040,4.86e-43,59;CL:0000559,4.86e-43,59;CL:0000860,1.28e-42,42;CL:0002057,1.28e-42,42;CL:0002009,2.88e-41,61;CL:0000839,2.64e-37,66;CL:0000557,1.39e-36,67;CL:0000766,2.83e-33,72;CL:0000763,1.48e-18,108;CL:0000049,1.48e-18,108;CL:0002087,8.77e-17,115;CL:0002031,1.19e-15,120;CL:0000134,1.19e-14,354;CL:0002320,1.19e-14,361;CL:0000048,6.89e-14,427;CL:0000723,2.03e-13,433;CL:0000034,8.21e-13,441;CL:0000738,1.31e-12,136;CL:0000219,9.12e-12,386;CL:0000235,1.34e-09,6;CL:0002032,3.80e-09,161;CL:0000837,3.80e-09,161;CL:0000037,2.22e-08,168;CL:0000988,1.70e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;5.92e-32;42!CL:0000049;1.78e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.80e-12!80;UBERON:0001474!2.18e-11!86;UBERON:0000926!4.26e-11!448;UBERON:0004120!4.26e-11!448;UBERON:0006603!4.26e-11!448;UBERON:0002405!5.98e-11!115;UBERON:0002204!7.31e-11!167;UBERON:0004765!4.09e-10!101;UBERON:0001434!4.09e-10!101;UBERON:0000062!7.63e-08!511;UBERON:0000468!1.35e-07!659;UBERON:0000467!1.79e-07!625;UBERON:0000480!2.42e-07!626;UBERON:0002390!4.40e-07!102;UBERON:0003061!4.40e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.60e-37,76;UBERON:0001474,2.12e-33,82;UBERON:0004765,6.36e-31,90;UBERON:0001434,8.86e-30,100;UBERON:0002405,1.14e-29,93;UBERON:0002390,5.19e-26,98;UBERON:0003061,5.19e-26,98;UBERON:0002193,7.10e-24,108;UBERON:0002204,1.30e-21,167;UBERON:0000926,1.02e-15,315;UBERON:0004120,1.02e-15,315;UBERON:0006603,1.02e-15,315;UBERON:0002384,1.72e-14,371;UBERON:0003081,6.09e-13,203 | |||
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| |||
|short_description=p@chr9:90345291..90345317,+ | |||
}} |
Revision as of 09:40, 14 September 2013
Short description: | p@chr9:90345291..90345317, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:90345291..90345317, + |
Coexpression cluster: | C667_CD14_tenocyte_Synoviocyte_Smooth_dura_Preadipocyte_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 7.35e-51 | 48 |
phagocyte | 7.35e-51 | 48 |
monopoietic cell | 4.86e-43 | 59 |
monocyte | 4.86e-43 | 59 |
monoblast | 4.86e-43 | 59 |
promonocyte | 4.86e-43 | 59 |
classical monocyte | 1.28e-42 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.28e-42 | 42 |
macrophage dendritic cell progenitor | 2.88e-41 | 61 |
myeloid lineage restricted progenitor cell | 2.64e-37 | 66 |
granulocyte monocyte progenitor cell | 1.39e-36 | 67 |
myeloid leukocyte | 2.83e-33 | 72 |
myeloid cell | 1.48e-18 | 108 |
common myeloid progenitor | 1.48e-18 | 108 |
nongranular leukocyte | 8.77e-17 | 115 |
hematopoietic lineage restricted progenitor cell | 1.19e-15 | 120 |
mesenchymal cell | 1.19e-14 | 354 |
connective tissue cell | 1.19e-14 | 361 |
multi fate stem cell | 6.89e-14 | 427 |
somatic stem cell | 2.03e-13 | 433 |
stem cell | 8.21e-13 | 441 |
leukocyte | 1.31e-12 | 136 |
motile cell | 9.12e-12 | 386 |
macrophage | 1.34e-09 | 6 |
hematopoietic oligopotent progenitor cell | 3.80e-09 | 161 |
hematopoietic multipotent progenitor cell | 3.80e-09 | 161 |
hematopoietic stem cell | 2.22e-08 | 168 |
hematopoietic cell | 1.70e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.60e-37 | 76 |
bone element | 2.12e-33 | 82 |
skeletal element | 6.36e-31 | 90 |
skeletal system | 8.86e-30 | 100 |
immune system | 1.14e-29 | 93 |
hematopoietic system | 5.19e-26 | 98 |
blood island | 5.19e-26 | 98 |
hemolymphoid system | 7.10e-24 | 108 |
musculoskeletal system | 1.30e-21 | 167 |
mesoderm | 1.02e-15 | 315 |
mesoderm-derived structure | 1.02e-15 | 315 |
presumptive mesoderm | 1.02e-15 | 315 |
connective tissue | 1.72e-14 | 371 |
lateral plate mesoderm | 6.09e-13 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.