FFCP PHASE1:Hg19::chr9:37027645..37027660,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C857|description=CAGE_peak_at_chr9:37027645..37027660,-|id=chr9:37027645..37027660,-|ontology_enrichment_celltype=CL:0000945!2.65e-52!24;CL:0000826!2.65e-52!24;CL:0000236!2.64e-34!14;CL:0000542!1.07e-23!53;CL:0000051!1.07e-23!53;CL:0000838!3.39e-22!52;CL:0002087!1.70e-10!119;CL:0000738!3.34e-09!140;CL:0000817!1.10e-08!3;CL:0000037!3.32e-07!172;CL:0000566!3.32e-07!172;CL:0000842!3.71e-07!3;CL:0002031!9.70e-07!124|ontology_enrichment_celltype_v019=CL:0000945;7.41e-94;24!CL:0000236;8.57e-57;13!CL:0000542;2.37e-29;53!CL:0000123;1.15e-09;2!CL:0000242;1.15e-09;2!CL:0002087;4.13e-08;104!CL:0000333;5.96e-08;5|ontology_enrichment_celltype_v019_2=CL:0000945,6.15e-94,24;CL:0000826,6.15e-94,24;CL:0000236,8.07e-61,14;CL:0000542,9.41e-47,53;CL:0000051,9.41e-47,53;CL:0000838,6.73e-44,52;CL:0002087,1.08e-19,115;CL:0002031,5.16e-17,120;CL:0000738,1.01e-15,136;CL:0000817,2.12e-14,3;CL:0002032,2.36e-12,161;CL:0000837,2.36e-12,161;CL:0000037,1.36e-11,168;CL:0000988,1.06e-10,177;CL:0000785,5.19e-10,2;CL:0000955,5.19e-10,2;CL:0000818,5.19e-10,2;CL:0000954,5.19e-10,2;CL:0000816,5.19e-10,2;CL:0000242,1.10e-09,2|ontology_enrichment_development_v019=CL:0000051;2.37e-29;53!CL:0000954;4.96e-10;2!UBERON:0004872;8.15e-10;7|ontology_enrichment_disease=DOID:0060058!7.53e-09!10|ontology_enrichment_disease_v019=DOID:0060058;1.41e-15;10|ontology_enrichment_disease_v019_2=DOID:0060058,1.23e-15,10|ontology_enrichment_uberon=UBERON:0000178!2.32e-08!15;UBERON:0000179!2.32e-08!15;UBERON:0000463!2.32e-08!15;UBERON:0004177!3.29e-08!7;UBERON:0002106!4.39e-08!3;UBERON:0004854!4.39e-08!3;UBERON:0009034!4.39e-08!3;UBERON:0002095!4.39e-08!3;UBERON:0004782!4.39e-08!3;UBERON:0003281!4.39e-08!3;UBERON:0009664!4.39e-08!3;UBERON:0002296!4.39e-08!3;UBERON:0005602!4.39e-08!3;UBERON:0001179!4.39e-08!3;UBERON:0006293!4.39e-08!3|ontology_enrichment_uberon_v019=UBERON:0002106;2.02e-13;3!UBERON:0004177;3.08e-08;5!UBERON:0005057;3.08e-08;5!UBERON:0000013;5.96e-08;5!UBERON:0002410;5.96e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.55e-13,3;UBERON:0004854,2.55e-13,3;UBERON:0009034,2.55e-13,3;UBERON:0002095,2.55e-13,3;UBERON:0004782,2.55e-13,3;UBERON:0003281,2.55e-13,3;UBERON:0009664,2.55e-13,3;UBERON:0002296,2.55e-13,3;UBERON:0005602,2.55e-13,3;UBERON:0001179,2.55e-13,3;UBERON:0006293,2.55e-13,3;UBERON:0000013,5.68e-08,5;UBERON:0002410,5.68e-08,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.96687137361683,5.17233713534658,5.27362234801651,0,0,0.154816123316076,0,0,0,1.70427841276664,5.54460006700944,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,7.03984977845291,8.7382177801941,8.00558328477199,5.54749289336459,2.40237592221607,4.59801951963587,6.61044872784862,9.54053754535364,10.8150464130795,7.04684627245127,5.73409842187843,0,1.12101712596307,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,1.52927441428475,0,0.952927101831156,1.23408681925858,0.648473311192717,0,0,0,0.962479855263359,0,2.22963810150862,19.3320745388436,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,3.86797481743607,0.503865495708552,0,3.56945935837101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03423011972439,0,0.520874984799877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,8.94028467156763,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,1.71594997861965,0,0,0,0,0,0,0,0,0,0,0,1.31443677139657,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,3.72562661089452,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05786081394152,0,0,0,0,0,0,0,19.3650231425624,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,4.68334905806882,2.60857851499485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C857 | |||
|description=CAGE_peak_at_chr9:37027645..37027660,- | |||
|id=chr9:37027645..37027660,- | |||
|ontology_enrichment_celltype=CL:0000945!2.65e-52!24;CL:0000826!2.65e-52!24;CL:0000236!2.64e-34!14;CL:0000542!1.07e-23!53;CL:0000051!1.07e-23!53;CL:0000838!3.39e-22!52;CL:0002087!1.70e-10!119;CL:0000738!3.34e-09!140;CL:0000817!1.10e-08!3;CL:0000037!3.32e-07!172;CL:0000566!3.32e-07!172;CL:0000842!3.71e-07!3;CL:0002031!9.70e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000945;7.41e-94;24!CL:0000236;8.57e-57;13!CL:0000542;2.37e-29;53!CL:0000123;1.15e-09;2!CL:0000242;1.15e-09;2!CL:0002087;4.13e-08;104!CL:0000333;5.96e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,6.15e-94,24;CL:0000826,6.15e-94,24;CL:0000236,8.07e-61,14;CL:0000542,9.41e-47,53;CL:0000051,9.41e-47,53;CL:0000838,6.73e-44,52;CL:0002087,1.08e-19,115;CL:0002031,5.16e-17,120;CL:0000738,1.01e-15,136;CL:0000817,2.12e-14,3;CL:0002032,2.36e-12,161;CL:0000837,2.36e-12,161;CL:0000037,1.36e-11,168;CL:0000988,1.06e-10,177;CL:0000785,5.19e-10,2;CL:0000955,5.19e-10,2;CL:0000818,5.19e-10,2;CL:0000954,5.19e-10,2;CL:0000816,5.19e-10,2;CL:0000242,1.10e-09,2 | |||
|ontology_enrichment_development_v019=CL:0000051;2.37e-29;53!CL:0000954;4.96e-10;2!UBERON:0004872;8.15e-10;7 | |||
|ontology_enrichment_disease=DOID:0060058!7.53e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.41e-15;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.23e-15,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.32e-08!15;UBERON:0000179!2.32e-08!15;UBERON:0000463!2.32e-08!15;UBERON:0004177!3.29e-08!7;UBERON:0002106!4.39e-08!3;UBERON:0004854!4.39e-08!3;UBERON:0009034!4.39e-08!3;UBERON:0002095!4.39e-08!3;UBERON:0004782!4.39e-08!3;UBERON:0003281!4.39e-08!3;UBERON:0009664!4.39e-08!3;UBERON:0002296!4.39e-08!3;UBERON:0005602!4.39e-08!3;UBERON:0001179!4.39e-08!3;UBERON:0006293!4.39e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.02e-13;3!UBERON:0004177;3.08e-08;5!UBERON:0005057;3.08e-08;5!UBERON:0000013;5.96e-08;5!UBERON:0002410;5.96e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.55e-13,3;UBERON:0004854,2.55e-13,3;UBERON:0009034,2.55e-13,3;UBERON:0002095,2.55e-13,3;UBERON:0004782,2.55e-13,3;UBERON:0003281,2.55e-13,3;UBERON:0009664,2.55e-13,3;UBERON:0002296,2.55e-13,3;UBERON:0005602,2.55e-13,3;UBERON:0001179,2.55e-13,3;UBERON:0006293,2.55e-13,3;UBERON:0000013,5.68e-08,5;UBERON:0002410,5.68e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.96687137361683,5.17233713534658,5.27362234801651,0,0,0.154816123316076,0,0,0,1.70427841276664,5.54460006700944,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,7.03984977845291,8.7382177801941,8.00558328477199,5.54749289336459,2.40237592221607,4.59801951963587,6.61044872784862,9.54053754535364,10.8150464130795,7.04684627245127,5.73409842187843,0,1.12101712596307,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,1.52927441428475,0,0.952927101831156,1.23408681925858,0.648473311192717,0,0,0,0.962479855263359,0,2.22963810150862,19.3320745388436,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,3.86797481743607,0.503865495708552,0,3.56945935837101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03423011972439,0,0.520874984799877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,8.94028467156763,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,1.71594997861965,0,0,0,0,0,0,0,0,0,0,0,1.31443677139657,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,3.72562661089452,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05786081394152,0,0,0,0,0,0,0,19.3650231425624,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,4.68334905806882,2.60857851499485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40683808434017,2.15649622793364,0,1.52893493468819,0,0,0,0,0.318004350653419,41.1658308906542,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.45701962667338,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0,2.68623139945635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935757853848423,0,0,0,0.549702583727146,2.71733118420012,0,0,2.82190377816914,0,0,0,0,0,0,1.31577485171795,2.06265241515447,5.09699895217138,0,0,0,0,0.458729283404541,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0.203977659483963,0.26721740526556,0.18378979906969,0,0,0.267964130156178,0,0,0.213233981900981,0,0.322944549180031,0.372448285775147,0,0,0,0,0,2.49202596153974,0,0,0,0,0,0,0,0,0,0,1.20764276154616,3.52625341533556 | |||
|short_description=p@chr9:37027645..37027660,- | |||
}} |
Revision as of 09:01, 14 September 2013
Short description: | p@chr9:37027645..37027660, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:37027645..37027660, - |
Coexpression cluster: | C857_non_lymphoma_CD19_acute_diffuse_Burkitt_B |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 6.15e-94 | 24 |
pro-B cell | 6.15e-94 | 24 |
B cell | 8.07e-61 | 14 |
lymphocyte | 9.41e-47 | 53 |
common lymphoid progenitor | 9.41e-47 | 53 |
lymphoid lineage restricted progenitor cell | 6.73e-44 | 52 |
nongranular leukocyte | 1.08e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 5.16e-17 | 120 |
leukocyte | 1.01e-15 | 136 |
precursor B cell | 2.12e-14 | 3 |
hematopoietic oligopotent progenitor cell | 2.36e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.36e-12 | 161 |
hematopoietic stem cell | 1.36e-11 | 168 |
hematopoietic cell | 1.06e-10 | 177 |
mature B cell | 5.19e-10 | 2 |
pre-B-II cell | 5.19e-10 | 2 |
transitional stage B cell | 5.19e-10 | 2 |
small pre-B-II cell | 5.19e-10 | 2 |
immature B cell | 5.19e-10 | 2 |
Merkel cell | 1.10e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.55e-13 | 3 |
gastrointestinal system mesentery | 2.55e-13 | 3 |
stomach region | 2.55e-13 | 3 |
mesentery | 2.55e-13 | 3 |
gastrointestinal system serosa | 2.55e-13 | 3 |
mesentery of stomach | 2.55e-13 | 3 |
gut mesentery | 2.55e-13 | 3 |
dorsal mesentery | 2.55e-13 | 3 |
dorsal mesogastrium | 2.55e-13 | 3 |
peritoneal cavity | 2.55e-13 | 3 |
spleen primordium | 2.55e-13 | 3 |
sympathetic nervous system | 5.68e-08 | 5 |
autonomic nervous system | 5.68e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.23e-15 | 10 |
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