FFCP PHASE1:Hg19::chr9:4793031..4793046,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10171|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17687|TSSclassifier=S|UniProt=|association_with_transcript=-40bp_to_ENST00000473230_5end|description=CAGE_peak_5_at_RCL1_5end|id=chr9:4793031..4793046,+|ontology_enrichment_celltype=CL:0000037!1.53e-11!172;CL:0000566!1.53e-11!172;CL:0000988!1.32e-10!182;CL:0002032!3.55e-10!165;CL:0000837!3.55e-10!165;CL:0000738!7.61e-09!140;CL:0000763!6.91e-08!112;CL:0000049!6.91e-08!112;CL:0002031!5.30e-07!124|ontology_enrichment_celltype_v019=CL:0000451;3.40e-08;10!CL:0000623;1.02e-07;3!CL:0000767;1.46e-07;3!CL:0000784;4.09e-07;3!CL:0000094;8.76e-07;8|ontology_enrichment_celltype_v019_2=CL:0000037,1.71e-15,168;CL:0000988,4.82e-14,177;CL:0002032,5.60e-13,161;CL:0000837,5.60e-13,161;CL:0000738,7.19e-10,136;CL:0000763,1.18e-09,108;CL:0000049,1.18e-09,108;CL:0000451,3.00e-08,10;CL:0000623,1.05e-07,3;CL:0000825,1.05e-07,3;CL:0000767,1.30e-07,3;CL:0000784,4.78e-07,3;CL:0000094,7.10e-07,8|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1036;7.39e-09;8|ontology_enrichment_disease_v019_2=DOID:1036,6.65e-09,8|ontology_enrichment_uberon=UBERON:0007023!1.28e-09!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.181678379270557,0.642301571672949,0.281908808191942,0,0.446961094427288,0,0,0,1.56711376919903,0.737201809504527,0,0.218441372130172,0.527533956456907,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0.313454721478088,0,0.136874425072884,0,0,0.246301768349837,0.393553906568396,2.75354993794233,7.29275856384704,4.4896675761662,0,0.30120591877825,0.369754010166788,0.542270404062111,0.426507697462265,0.293600439334847,3.32397245119126,3.20871115952227,1.95309783644267,0.223915474239924,0.647787332037959,1.54545340580512,0.290796477559129,0,0.970336244751265,0.232429036905685,0.411167888021826,0.619412741790207,0.28769239232215,0.768482119587302,0.236482229888585,0,0.645484683583826,0,0.564727018627814,0.818718450173537,0.224723484445085,0,0.962787081228281,1.91801137739712,0.329851300186716,1.19678194572979,0,0.580418477257168,0.56738522469114,0,0,0.521482918420201,0.65156653411535,0.605399502633369,0.368277635987565,0.949387162322653,0.633765858935825,0,0,0.44931452458598,0.300353785683013,0.64290234678832,0,0,0,0,0,0.889509253863555,0,0.400395987036012,0.574752439954483,0,0.954053754535364,1.70763890732835,4.11066032559657,3.44045905312706,1.32171328579026,2.24203425192614,1.05353633910031,2.55722701147983,8.25322601773246,4.5232329779892,0.334372990781356,0.977766799900771,0,0,0.222820913770347,0.294605907474837,0.443067789167242,0.270803863765016,0.896639238079726,0.260118695119756,0.493313713811028,0.276350017785848,0.289803085735052,0.444859689486181,0,0,0.113309342697566,1.14966148080576,0.68725489096526,0.759059076058509,0,0,0,0.301150238155546,0,0,0,0,9.27391018833769,9.36040685242276,5.06885413589796,0,0.670700859703636,0.255725123687061,0.361439152384566,0,0.869079113764942,0,0.486634870302636,0.0945348171640679,0,0.351339142772504,0.851363990735132,0,0,0,0.348259474598534,0.531831842075461,2.38490624305342,2.28797964312051,2.22874500797739,0.198762407366705,0,0,0.56530794192401,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0,0,0,0.183201743930407,2.63560834872127,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0,0.311211035399766,0.269421344139376,0,0.151357427644931,0,0,0,0,0.298897361103602,0.117434498643765,0.323745888736263,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0.438977620880838,0.612975591598039,0,0,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0.193260853163297,0,0,0.487894824518382,0.662648841607426,0.69716365721711,0.725627385107593,0.504641701751257,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0.220587945464788,0.217879444092406,0,0,0.588664395376038,0,0.738155454624648,0,0,0,1.26755034821831,1.96565443335525,0.590789906681404,0,0.122988438543114,0.171567810298526,0,0,0.100528972411631,0.277765335475589,0,0,0,0,0.117408694235822,0.288732895522148,0,0.380508304469197,1.58040879591855,1.71697232418975,0.492434012174795,0.234004265139238,1.0404181360211,0,0.16798212819886,0.141775097242386,0.179117045405697,0,0,0.492663237895943,0.528290604079356,1.86595303986695,0.864719720501769,1.38866676769018,0.253991577168676,0.381988425558278,0,0,0.102827492703324,0,0,0,0,0.22001485746285,0.517086863031111,0,0,0.26593811658487,0,0.257207374262142,0,0.532844358032199,0.57191197463259,0,0,0.325736184293735,0,0,0,0,0,0,0.502257091432126,0,0.239624855491583,0,0,0.144781306667579,0,0.358121926479791,0.336255431980582,3.54655368363469,6.68445482064504,5.00537841491019,0.254094624222463,0,0.773288812777695,0.335032530668698,0,0,2.99161459204025,0,0.12269149171914,0.500170521059677,0,0,0.178428988797162,0,0.117141414992713,0.601892199455438,0,1.03473071292505,0.664225598535437,0.184369168541703,0,0.1958011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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10171 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17687 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-40bp_to_ENST00000473230_5end | |||
|description=CAGE_peak_5_at_RCL1_5end | |||
|id=chr9:4793031..4793046,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.53e-11!172;CL:0000566!1.53e-11!172;CL:0000988!1.32e-10!182;CL:0002032!3.55e-10!165;CL:0000837!3.55e-10!165;CL:0000738!7.61e-09!140;CL:0000763!6.91e-08!112;CL:0000049!6.91e-08!112;CL:0002031!5.30e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000451;3.40e-08;10!CL:0000623;1.02e-07;3!CL:0000767;1.46e-07;3!CL:0000784;4.09e-07;3!CL:0000094;8.76e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.71e-15,168;CL:0000988,4.82e-14,177;CL:0002032,5.60e-13,161;CL:0000837,5.60e-13,161;CL:0000738,7.19e-10,136;CL:0000763,1.18e-09,108;CL:0000049,1.18e-09,108;CL:0000451,3.00e-08,10;CL:0000623,1.05e-07,3;CL:0000825,1.05e-07,3;CL:0000767,1.30e-07,3;CL:0000784,4.78e-07,3;CL:0000094,7.10e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1036;7.39e-09;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,6.65e-09,8 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.28e-09!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p5@RCL1 | |||
}} |
Revision as of 09:06, 14 September 2013
Short description: | p5@RCL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_RCL1_5end |
Coexpression cluster: | NA |
Association with transcript: | -40bp_to_ENST00000473230_5end |
EntrezGene: | RCL1 |
HGNC: | 17687 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.71e-15 | 168 |
hematopoietic cell | 4.82e-14 | 177 |
hematopoietic oligopotent progenitor cell | 5.60e-13 | 161 |
hematopoietic multipotent progenitor cell | 5.60e-13 | 161 |
leukocyte | 7.19e-10 | 136 |
myeloid cell | 1.18e-09 | 108 |
common myeloid progenitor | 1.18e-09 | 108 |
dendritic cell | 3.00e-08 | 10 |
natural killer cell | 1.05e-07 | 3 |
pro-NK cell | 1.05e-07 | 3 |
basophil | 1.30e-07 | 3 |
plasmacytoid dendritic cell | 4.78e-07 | 3 |
granulocyte | 7.10e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 6.65e-09 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.