FFCP PHASE1:Hg19::chr8:125740876..125740886,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9788|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20443|TSSclassifier=S|UniProt=O43312|association_with_transcript=-146bp_to_ENST00000354184,NM_014751,uc003yrj.2,uc003yrk.2,uc003yrl.2_5end|coexpression_cluster_id=C2008|description=CAGE_peak_6_at_MTSS1_5end|id=chr8:125740876..125740886,-|ontology_enrichment_celltype=CL:0002057!1.57e-26!42;CL:0000557!1.03e-24!71;CL:0000860!2.04e-23!45;CL:0002009!1.29e-22!65;CL:0000839!1.79e-22!70;CL:0000766!3.53e-22!76;CL:0000763!1.19e-21!112;CL:0000049!1.19e-21!112;CL:0002194!4.55e-21!63;CL:0000576!4.55e-21!63;CL:0000040!4.55e-21!63;CL:0000559!4.55e-21!63;CL:0000738!5.09e-21!140;CL:0002032!2.42e-19!165;CL:0000837!2.42e-19!165;CL:0000037!3.33e-19!172;CL:0000566!3.33e-19!172;CL:0002031!9.56e-19!124;CL:0002087!2.02e-17!119;CL:0000988!1.10e-16!182;CL:0002393!3.81e-08!9;CL:0002397!3.81e-08!9|ontology_enrichment_celltype_v019=CL:0000860;1.22e-34;33!CL:0002057;1.22e-34;33!CL:0000576;8.69e-34;48!CL:0000473;5.47e-29;39!CL:0000234;5.47e-29;39!CL:0000766;9.78e-27;69!CL:0000236;1.92e-16;13!CL:0000763;3.39e-16;100!CL:0000453;8.56e-13;5!CL:0000738;1.34e-12;136!CL:0002087;1.86e-12;104!CL:0002393;8.24e-10;6!CL:0002397;8.24e-10;6!CL:0000988;3.69e-09;177!CL:0000945;8.17e-08;24!CL:0000875;1.86e-07;3!CL:0002396;1.86e-07;3!CL:0000097;4.17e-07;5!CL:0002619;5.24e-07;3!CL:0000990;7.80e-07;8|ontology_enrichment_celltype_v019_2=CL:0000557,5.91e-56,67;CL:0000763,2.00e-53,108;CL:0000049,2.00e-53,108;CL:0000473,4.22e-52,48;CL:0000234,4.22e-52,48;CL:0000860,3.21e-51,42;CL:0002057,3.21e-51,42;CL:0002009,5.30e-51,61;CL:0000839,5.74e-51,66;CL:0000766,1.08e-50,72;CL:0002032,9.18e-49,161;CL:0000837,9.18e-49,161;CL:0000738,1.67e-48,136;CL:0000037,1.68e-47,168;CL:0002194,5.01e-47,59;CL:0000576,5.01e-47,59;CL:0000040,5.01e-47,59;CL:0000559,5.01e-47,59;CL:0002031,1.11e-44,120;CL:0000988,3.87e-44,177;CL:0002087,2.96e-37,115;CL:0002393,1.82e-15,9;CL:0002397,1.82e-15,9;CL:0000236,4.23e-15,14;CL:0000134,4.72e-15,354;CL:0002320,2.09e-14,361;CL:0000453,9.18e-13,5;CL:0000048,2.89e-12,427;CL:0000219,3.81e-12,386;CL:0000034,7.55e-12,441;CL:0000723,7.83e-12,433;CL:0000945,8.06e-08,24;CL:0000826,8.06e-08,24;CL:0000875,1.63e-07,3;CL:0002396,1.63e-07,3;CL:0000097,2.84e-07,5;CL:0002028,2.84e-07,5;CL:0002619,4.89e-07,3;CL:0000990,8.08e-07,8|ontology_enrichment_development_v019=CL:0002057;1.52e-37;42!CL:0000049;9.58e-14;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.96e-24!102;UBERON:0003061!1.96e-24!102;UBERON:0002193!1.28e-22!112;UBERON:0002371!3.38e-21!80;UBERON:0002405!6.18e-20!115;UBERON:0001474!3.50e-19!86;UBERON:0004765!2.22e-14!101;UBERON:0001434!2.22e-14!101;UBERON:0003081!1.21e-09!216;UBERON:0002204!2.69e-07!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.36e-50,76;UBERON:0001474,1.89e-45,82;UBERON:0002390,2.27e-45,98;UBERON:0003061,2.27e-45,98;UBERON:0002405,2.19e-40,93;UBERON:0004765,3.16e-40,90;UBERON:0002193,7.99e-40,108;UBERON:0001434,7.12e-35,100;UBERON:0002204,1.41e-20,167;UBERON:0003081,4.60e-18,203;UBERON:0002384,1.58e-13,371;UBERON:0000926,2.80e-08,315;UBERON:0004120,2.80e-08,315;UBERON:0006603,2.80e-08,315|phase1_expression=0.181678379270557,0.856402095563933,0.281908808191942,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0.393364276848904,2.30297638858328,2.63187409637329,1.83884244895785,0.30120591877825,1.84877005083394,0,0,0,3.32397245119126,6.81851121398482,5.64228263861215,2.68698569087909,1.29557466407592,2.83333124397605,1.89017710413434,2.64513160582167,2.91100873425379,3.48643555358527,3.70051099219643,3.09706370895104,0,2.0492856522328,0.709446689665756,1.37898272294647,0.645484683583826,0,1.50593871634084,1.63743690034707,2.02251136000576,1.83650335422542,1.28371610830437,1.27867425159808,0.989553900560148,1.79517291859469,0.426224750532694,2.90209238628584,6.24123747160254,6.85104473895132,1.00499466102697,2.08593167368081,1.73751075764093,3.02699751316684,4.41933163185078,6.32924774881769,2.32380814943136,0.637812899895131,2.09658645508376,1.23561494261145,0.901061357049038,1.12507910687956,5.98526761856622,1.59133341759272,3.10529061399878,0,3.27683166757279,3.55803701545422,3.41384178053206,2.00197993518006,2.87376219977242,4.62731410949403,4.77026877267682,5.69212969109448,4.11066032559657,3.44045905312706,0,1.12101712596307,0,0,0.786021525498329,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0.289803085735052,0,0,0,0,0.383220493601921,0,0,0,0,0,0.150575119077773,0,0,0,0.821127996921047,0.201606743224732,0.267440195783507,0.434473211648397,2.43806866313962,1.34140171940727,0.255725123687061,0,0,0,0,0,0,0,0.087834785693126,0.523916301990851,0.728590576585084,0.370784442784429,0,0,0,0.715471872916026,0,0,0,0,0.694281003215189,0,0,0,0.208994966536811,0,0,0.33472061276467,0.402829317109147,0,0.24406205754817,0,0.81014194788176,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8605658,0,0,0.730336388246517,0,0.143339583151451,0,0.203974470572744,0.436350690340377,0.5290268405154,0,0,0.432626562123789,0,0,0.126698501011437,0,0,0.18378979906969,1.50424523575425,0.454672189309436,0.535928260312357,0,0.103432995861895,0.426467963801962,0,0.452122368852043,0.558672428662721,0,0,0.404234377916439,0.435433495793923,0.342233301085281,0.471464371102113,0.645499848534087,0,0.162806537221949,0,0,0,0,0.244482888365733,0.406896178315738,0,0.402547587182052,0|short_description=p6@MTSS1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=9788 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20443 | |||
|TSSclassifier=S | |||
|UniProt=O43312 | |||
|association_with_transcript=-146bp_to_ENST00000354184,NM_014751,uc003yrj.2,uc003yrk.2,uc003yrl.2_5end | |||
|coexpression_cluster_id=C2008 | |||
|description=CAGE_peak_6_at_MTSS1_5end | |||
|id=chr8:125740876..125740886,- | |||
|ontology_enrichment_celltype=CL:0002057!1.57e-26!42;CL:0000557!1.03e-24!71;CL:0000860!2.04e-23!45;CL:0002009!1.29e-22!65;CL:0000839!1.79e-22!70;CL:0000766!3.53e-22!76;CL:0000763!1.19e-21!112;CL:0000049!1.19e-21!112;CL:0002194!4.55e-21!63;CL:0000576!4.55e-21!63;CL:0000040!4.55e-21!63;CL:0000559!4.55e-21!63;CL:0000738!5.09e-21!140;CL:0002032!2.42e-19!165;CL:0000837!2.42e-19!165;CL:0000037!3.33e-19!172;CL:0000566!3.33e-19!172;CL:0002031!9.56e-19!124;CL:0002087!2.02e-17!119;CL:0000988!1.10e-16!182;CL:0002393!3.81e-08!9;CL:0002397!3.81e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.22e-34;33!CL:0002057;1.22e-34;33!CL:0000576;8.69e-34;48!CL:0000473;5.47e-29;39!CL:0000234;5.47e-29;39!CL:0000766;9.78e-27;69!CL:0000236;1.92e-16;13!CL:0000763;3.39e-16;100!CL:0000453;8.56e-13;5!CL:0000738;1.34e-12;136!CL:0002087;1.86e-12;104!CL:0002393;8.24e-10;6!CL:0002397;8.24e-10;6!CL:0000988;3.69e-09;177!CL:0000945;8.17e-08;24!CL:0000875;1.86e-07;3!CL:0002396;1.86e-07;3!CL:0000097;4.17e-07;5!CL:0002619;5.24e-07;3!CL:0000990;7.80e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,5.91e-56,67;CL:0000763,2.00e-53,108;CL:0000049,2.00e-53,108;CL:0000473,4.22e-52,48;CL:0000234,4.22e-52,48;CL:0000860,3.21e-51,42;CL:0002057,3.21e-51,42;CL:0002009,5.30e-51,61;CL:0000839,5.74e-51,66;CL:0000766,1.08e-50,72;CL:0002032,9.18e-49,161;CL:0000837,9.18e-49,161;CL:0000738,1.67e-48,136;CL:0000037,1.68e-47,168;CL:0002194,5.01e-47,59;CL:0000576,5.01e-47,59;CL:0000040,5.01e-47,59;CL:0000559,5.01e-47,59;CL:0002031,1.11e-44,120;CL:0000988,3.87e-44,177;CL:0002087,2.96e-37,115;CL:0002393,1.82e-15,9;CL:0002397,1.82e-15,9;CL:0000236,4.23e-15,14;CL:0000134,4.72e-15,354;CL:0002320,2.09e-14,361;CL:0000453,9.18e-13,5;CL:0000048,2.89e-12,427;CL:0000219,3.81e-12,386;CL:0000034,7.55e-12,441;CL:0000723,7.83e-12,433;CL:0000945,8.06e-08,24;CL:0000826,8.06e-08,24;CL:0000875,1.63e-07,3;CL:0002396,1.63e-07,3;CL:0000097,2.84e-07,5;CL:0002028,2.84e-07,5;CL:0002619,4.89e-07,3;CL:0000990,8.08e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.52e-37;42!CL:0000049;9.58e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.96e-24!102;UBERON:0003061!1.96e-24!102;UBERON:0002193!1.28e-22!112;UBERON:0002371!3.38e-21!80;UBERON:0002405!6.18e-20!115;UBERON:0001474!3.50e-19!86;UBERON:0004765!2.22e-14!101;UBERON:0001434!2.22e-14!101;UBERON:0003081!1.21e-09!216;UBERON:0002204!2.69e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.36e-50,76;UBERON:0001474,1.89e-45,82;UBERON:0002390,2.27e-45,98;UBERON:0003061,2.27e-45,98;UBERON:0002405,2.19e-40,93;UBERON:0004765,3.16e-40,90;UBERON:0002193,7.99e-40,108;UBERON:0001434,7.12e-35,100;UBERON:0002204,1.41e-20,167;UBERON:0003081,4.60e-18,203;UBERON:0002384,1.58e-13,371;UBERON:0000926,2.80e-08,315;UBERON:0004120,2.80e-08,315;UBERON:0006603,2.80e-08,315 | |||
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| |||
|short_description=p6@MTSS1 | |||
}} |
Revision as of 03:27, 14 September 2013
Short description: | p6@MTSS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_MTSS1_5end |
Coexpression cluster: | C2008_immature_migratory_CD14CD16_CD14_leukemia_mesothelioma_temporal |
Association with transcript: | -146bp_to_ENST00000354184, NM_014751, uc003yrj.2, uc003yrk.2, uc003yrl.2_5end |
EntrezGene: | MTSS1 |
HGNC: | 20443 |
UniProt: | O43312 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.36e-50 | 76 |
bone element | 1.89e-45 | 82 |
hematopoietic system | 2.27e-45 | 98 |
blood island | 2.27e-45 | 98 |
immune system | 2.19e-40 | 93 |
skeletal element | 3.16e-40 | 90 |
hemolymphoid system | 7.99e-40 | 108 |
skeletal system | 7.12e-35 | 100 |
musculoskeletal system | 1.41e-20 | 167 |
lateral plate mesoderm | 4.60e-18 | 203 |
connective tissue | 1.58e-13 | 371 |
mesoderm | 2.80e-08 | 315 |
mesoderm-derived structure | 2.80e-08 | 315 |
presumptive mesoderm | 2.80e-08 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.