FFCP PHASE1:Hg19::chr8:105235550..105235571,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9699|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17283|TSSclassifier=S|UniProt=E5RI36|association_with_transcript=-20bp_to_ENST00000523362_5end|coexpression_cluster_id=C136|description=CAGE_peak_11_at_RIMS2_5end|id=chr8:105235550..105235571,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002566;1.07e-11;1|ontology_enrichment_celltype_v019_2=CL:0002566,1.07e-11,1|ontology_enrichment_development_v019=UBERON:0000358;4.78e-12;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2355;2.93e-12;1!DOID:74;9.43e-07;2|ontology_enrichment_disease_v019_2=DOID:2355,2.93e-12,1;DOID:74,9.44e-07,2|ontology_enrichment_uberon=UBERON:0001049!5.15e-20!57;UBERON:0005068!5.15e-20!57;UBERON:0006241!5.15e-20!57;UBERON:0007135!5.15e-20!57;UBERON:0001950!2.67e-18!20;UBERON:0003075!5.20e-18!86;UBERON:0007284!5.20e-18!86;UBERON:0002619!5.58e-18!22;UBERON:0000073!1.20e-17!94;UBERON:0001016!1.20e-17!94;UBERON:0002616!1.90e-17!59;UBERON:0001017!3.00e-17!82;UBERON:0002780!3.99e-17!41;UBERON:0001890!3.99e-17!41;UBERON:0006240!3.99e-17!41;UBERON:0005743!8.18e-17!86;UBERON:0001893!8.96e-17!34;UBERON:0001869!9.48e-17!32;UBERON:0002346!1.24e-16!90;UBERON:0003080!1.58e-16!42;UBERON:0000955!4.03e-16!69;UBERON:0006238!4.03e-16!69;UBERON:0003056!5.09e-16!61;UBERON:0002791!1.35e-15!33;UBERON:0000153!2.88e-15!129;UBERON:0007811!2.88e-15!129;UBERON:0000956!3.31e-15!25;UBERON:0000203!3.31e-15!25;UBERON:0002020!4.09e-15!34;UBERON:0003528!4.09e-15!34;UBERON:0000033!2.73e-14!123;UBERON:0004121!7.61e-14!169;UBERON:0000924!3.85e-13!173;UBERON:0006601!3.85e-13!173;UBERON:0007023!5.63e-11!115;UBERON:0001872!1.91e-08!5;UBERON:0002021!4.76e-08!5;UBERON:0000475!1.29e-07!365;UBERON:0000064!2.31e-07!219;UBERON:0000200!6.69e-07!6|ontology_enrichment_uberon_v019=UBERON:0001872;3.38e-19;5!UBERON:0001950;2.59e-12;20!UBERON:0002581;1.07e-11;1!UBERON:0007190;1.07e-11;1!UBERON:0002619;3.09e-11;22!UBERON:0001893;5.43e-10;34!UBERON:0000956;6.28e-10;25!UBERON:0000203;6.28e-10;25!UBERON:0001869;1.22e-09;32!UBERON:0000200;7.85e-08;6!UBERON:0002791;3.54e-07;32!UBERON:0003528;3.61e-07;34!UBERON:0002020;3.61e-07;34!UBERON:0002780;4.31e-07;41!UBERON:0001890;4.31e-07;41|ontology_enrichment_uberon_v019_2=UBERON:0001872,4.34e-19,5;UBERON:0001950,3.10e-12,20;UBERON:0007190,6.26e-12,1;UBERON:0002581,1.32e-11,1;UBERON:0002619,3.65e-11,22;UBERON:0001869,6.10e-11,32;UBERON:0001049,9.42e-11,56;UBERON:0005068,9.42e-11,56;UBERON:0006241,9.42e-11,56;UBERON:0007135,9.42e-11,56;UBERON:0001893,2.71e-10,34;UBERON:0000956,7.26e-10,25;UBERON:0000203,7.26e-10,25;UBERON:0003075,5.12e-09,82;UBERON:0007284,5.12e-09,82;UBERON:0000073,9.26e-09,53;UBERON:0002616,9.26e-09,53;UBERON:0002346,1.51e-08,86;UBERON:0002780,1.64e-08,41;UBERON:0001890,1.64e-08,41;UBERON:0003080,1.64e-08,41;UBERON:0006240,1.64e-08,41;UBERON:0000200,7.08e-08,6;UBERON:0002791,9.53e-08,32;UBERON:0003056,1.42e-07,61;UBERON:0003528,2.69e-07,34;UBERON:0002020,2.69e-07,34;UBERON:0001017,4.30e-07,81;UBERON:0010371,7.01e-07,104|phase1_expression=0.363356758541113,0.214100523890983,0.422863212287913,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0,0,0,0,0.164201178899891,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0.243947412259191,0.397589304964456,0.464775771478074,0.310983165046111,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,2.88662684050547,0.115930404975077,0.587043471179108,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.268675568108545,0,0.383382679165211,0,0,0,0,0,1.07946420296687,0.381988425558278,0,0,0.205654985406647,0,0,0,0,0,0.258543431515556,0,0,0,0,0.257207374262142,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0,0,0.303127571446259,3.32870879020994,0.604780586659361,0.744323423456331,0,0,0.128139149255701,0,0.321707842287215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0.354761064070598,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.4123235937781,0,0,0,0,0.426851060090485,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9699 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17283 | |||
|TSSclassifier=S | |||
|UniProt=E5RI36 | |||
|association_with_transcript=-20bp_to_ENST00000523362_5end | |||
|coexpression_cluster_id=C136 | |||
|description=CAGE_peak_11_at_RIMS2_5end | |||
|id=chr8:105235550..105235571,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002566;1.07e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002566,1.07e-11,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.78e-12;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2355;2.93e-12;1!DOID:74;9.43e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,2.93e-12,1;DOID:74,9.44e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!5.15e-20!57;UBERON:0005068!5.15e-20!57;UBERON:0006241!5.15e-20!57;UBERON:0007135!5.15e-20!57;UBERON:0001950!2.67e-18!20;UBERON:0003075!5.20e-18!86;UBERON:0007284!5.20e-18!86;UBERON:0002619!5.58e-18!22;UBERON:0000073!1.20e-17!94;UBERON:0001016!1.20e-17!94;UBERON:0002616!1.90e-17!59;UBERON:0001017!3.00e-17!82;UBERON:0002780!3.99e-17!41;UBERON:0001890!3.99e-17!41;UBERON:0006240!3.99e-17!41;UBERON:0005743!8.18e-17!86;UBERON:0001893!8.96e-17!34;UBERON:0001869!9.48e-17!32;UBERON:0002346!1.24e-16!90;UBERON:0003080!1.58e-16!42;UBERON:0000955!4.03e-16!69;UBERON:0006238!4.03e-16!69;UBERON:0003056!5.09e-16!61;UBERON:0002791!1.35e-15!33;UBERON:0000153!2.88e-15!129;UBERON:0007811!2.88e-15!129;UBERON:0000956!3.31e-15!25;UBERON:0000203!3.31e-15!25;UBERON:0002020!4.09e-15!34;UBERON:0003528!4.09e-15!34;UBERON:0000033!2.73e-14!123;UBERON:0004121!7.61e-14!169;UBERON:0000924!3.85e-13!173;UBERON:0006601!3.85e-13!173;UBERON:0007023!5.63e-11!115;UBERON:0001872!1.91e-08!5;UBERON:0002021!4.76e-08!5;UBERON:0000475!1.29e-07!365;UBERON:0000064!2.31e-07!219;UBERON:0000200!6.69e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001872;3.38e-19;5!UBERON:0001950;2.59e-12;20!UBERON:0002581;1.07e-11;1!UBERON:0007190;1.07e-11;1!UBERON:0002619;3.09e-11;22!UBERON:0001893;5.43e-10;34!UBERON:0000956;6.28e-10;25!UBERON:0000203;6.28e-10;25!UBERON:0001869;1.22e-09;32!UBERON:0000200;7.85e-08;6!UBERON:0002791;3.54e-07;32!UBERON:0003528;3.61e-07;34!UBERON:0002020;3.61e-07;34!UBERON:0002780;4.31e-07;41!UBERON:0001890;4.31e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001872,4.34e-19,5;UBERON:0001950,3.10e-12,20;UBERON:0007190,6.26e-12,1;UBERON:0002581,1.32e-11,1;UBERON:0002619,3.65e-11,22;UBERON:0001869,6.10e-11,32;UBERON:0001049,9.42e-11,56;UBERON:0005068,9.42e-11,56;UBERON:0006241,9.42e-11,56;UBERON:0007135,9.42e-11,56;UBERON:0001893,2.71e-10,34;UBERON:0000956,7.26e-10,25;UBERON:0000203,7.26e-10,25;UBERON:0003075,5.12e-09,82;UBERON:0007284,5.12e-09,82;UBERON:0000073,9.26e-09,53;UBERON:0002616,9.26e-09,53;UBERON:0002346,1.51e-08,86;UBERON:0002780,1.64e-08,41;UBERON:0001890,1.64e-08,41;UBERON:0003080,1.64e-08,41;UBERON:0006240,1.64e-08,41;UBERON:0000200,7.08e-08,6;UBERON:0002791,9.53e-08,32;UBERON:0003056,1.42e-07,61;UBERON:0003528,2.69e-07,34;UBERON:0002020,2.69e-07,34;UBERON:0001017,4.30e-07,81;UBERON:0010371,7.01e-07,104 | |||
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|short_description=p11@RIMS2 | |||
}} |
Revision as of 03:02, 14 September 2013
Short description: | p11@RIMS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_RIMS2_5end |
Coexpression cluster: | C136_Wilms_extraskeletal_anaplastic_rhabdomyosarcoma_cholangiocellular_nonsmall_neuroectodermal |
Association with transcript: | -20bp_to_ENST00000523362_5end |
EntrezGene: | RIMS2 |
HGNC: | 17283 |
UniProt: | E5RI36 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dark melanocyte | 1.07e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
parietal lobe | 4.34e-19 | 5 |
neocortex | 3.10e-12 | 20 |
paracentral gyrus | 6.26e-12 | 1 |
postcentral gyrus | 1.32e-11 | 1 |
regional part of cerebral cortex | 3.65e-11 | 22 |
cerebral hemisphere | 6.10e-11 | 32 |
neural tube | 9.42e-11 | 56 |
neural rod | 9.42e-11 | 56 |
future spinal cord | 9.42e-11 | 56 |
neural keel | 9.42e-11 | 56 |
telencephalon | 2.71e-10 | 34 |
cerebral cortex | 7.26e-10 | 25 |
pallium | 7.26e-10 | 25 |
neural plate | 5.12e-09 | 82 |
presumptive neural plate | 5.12e-09 | 82 |
regional part of nervous system | 9.26e-09 | 53 |
regional part of brain | 9.26e-09 | 53 |
neurectoderm | 1.51e-08 | 86 |
regional part of forebrain | 1.64e-08 | 41 |
forebrain | 1.64e-08 | 41 |
anterior neural tube | 1.64e-08 | 41 |
future forebrain | 1.64e-08 | 41 |
gyrus | 7.08e-08 | 6 |
regional part of telencephalon | 9.53e-08 | 32 |
pre-chordal neural plate | 1.42e-07 | 61 |
brain grey matter | 2.69e-07 | 34 |
gray matter | 2.69e-07 | 34 |
central nervous system | 4.30e-07 | 81 |
ecto-epithelium | 7.01e-07 | 104 |
Ontology term | p-value | n |
---|---|---|
anemia | 2.93e-12 | 1 |
hematopoietic system disease | 9.44e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.