FFCP PHASE1:Hg19::chr8:80963673..80963679,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7163|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12005|TSSclassifier=S|UniProt=|association_with_transcript=-22bp_to_ENST00000523395_5end|coexpression_cluster_id=C285|description=CAGE_peak_29_at_TPD52_5end|id=chr8:80963673..80963679,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:12603!7.18e-09!1|ontology_enrichment_disease_v019=DOID:4362;1.40e-14;5|ontology_enrichment_disease_v019_2=DOID:4362,1.40e-14,5|ontology_enrichment_uberon=UBERON:0007023!2.27e-13!115;UBERON:0002020!2.12e-12!34;UBERON:0003528!2.12e-12!34;UBERON:0001869!3.54e-10!32;UBERON:0002780!3.93e-10!41;UBERON:0001890!3.93e-10!41;UBERON:0006240!3.93e-10!41;UBERON:0003080!7.17e-10!42;UBERON:0002791!7.44e-10!33;UBERON:0001893!1.50e-09!34;UBERON:0002084!4.52e-09!1;UBERON:0002082!4.52e-09!1;UBERON:0004706!4.52e-09!1;UBERON:0001049!6.63e-09!57;UBERON:0005068!6.63e-09!57;UBERON:0006241!6.63e-09!57;UBERON:0007135!6.63e-09!57;UBERON:0000955!1.10e-08!69;UBERON:0006238!1.10e-08!69;UBERON:0001882!1.13e-08!1;UBERON:0005403!1.13e-08!1;UBERON:0002616!1.46e-08!59;UBERON:0002902!2.06e-08!1;UBERON:0009899!2.06e-08!1;UBERON:0002581!2.22e-08!1;UBERON:0001737!5.39e-08!9;UBERON:0002308!6.54e-08!9;UBERON:0000125!6.54e-08!9;UBERON:0002619!6.79e-08!22;UBERON:0001017!4.29e-07!82;UBERON:0000349!5.57e-07!5;UBERON:0000956!5.85e-07!25;UBERON:0000203!5.85e-07!25;UBERON:0002021!7.26e-07!5|ontology_enrichment_uberon_v019=UBERON:0001954;5.96e-34;2!UBERON:0003022;5.96e-34;2!UBERON:0002421;5.96e-34;2!UBERON:0002600;5.96e-34;2!UBERON:0002021;1.71e-14;5!UBERON:0000349;1.71e-14;5!UBERON:0002619;1.41e-12;22!UBERON:0000002;2.19e-12;6!UBERON:0001560;2.19e-12;6!UBERON:0000956;2.91e-11;25!UBERON:0000203;2.91e-11;25!UBERON:0002791;2.91e-09;32!UBERON:0001869;2.91e-09;32!UBERON:0001893;1.30e-08;34!UBERON:0003528;5.80e-08;34!UBERON:0002780;5.80e-08;41!UBERON:0002020;5.80e-08;34!UBERON:0001890;5.80e-08;41|ontology_enrichment_uberon_v019_2=UBERON:0001954,5.04e-34,2;UBERON:0003022,5.04e-34,2;UBERON:0002421,5.04e-34,2;UBERON:0002600,5.04e-34,2;UBERON:0000349,1.60e-14,5;UBERON:0002021,1.83e-14,5;UBERON:0002619,1.41e-12,22;UBERON:0000002,2.19e-12,6;UBERON:0001560,2.19e-12,6;UBERON:0000956,2.91e-11,25;UBERON:0000203,2.91e-11,25;UBERON:0002791,4.11e-09,32;UBERON:0001869,4.11e-09,32;UBERON:0003528,1.18e-08,34;UBERON:0002020,1.18e-08,34;UBERON:0001893,1.18e-08,34;UBERON:0002780,2.17e-07,41;UBERON:0001890,2.17e-07,41;UBERON:0003080,2.17e-07,41;UBERON:0006240,2.17e-07,41|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.220587945464788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.22904624891153,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,1.41696576325585,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0.714193294391221,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p29@TPD52}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=7163 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12005 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-22bp_to_ENST00000523395_5end | |||
|coexpression_cluster_id=C285 | |||
|description=CAGE_peak_29_at_TPD52_5end | |||
|id=chr8:80963673..80963679,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:12603!7.18e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:4362;1.40e-14;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,1.40e-14,5 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001954;5.96e-34;2!UBERON:0003022;5.96e-34;2!UBERON:0002421;5.96e-34;2!UBERON:0002600;5.96e-34;2!UBERON:0002021;1.71e-14;5!UBERON:0000349;1.71e-14;5!UBERON:0002619;1.41e-12;22!UBERON:0000002;2.19e-12;6!UBERON:0001560;2.19e-12;6!UBERON:0000956;2.91e-11;25!UBERON:0000203;2.91e-11;25!UBERON:0002791;2.91e-09;32!UBERON:0001869;2.91e-09;32!UBERON:0001893;1.30e-08;34!UBERON:0003528;5.80e-08;34!UBERON:0002780;5.80e-08;41!UBERON:0002020;5.80e-08;34!UBERON:0001890;5.80e-08;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,5.04e-34,2;UBERON:0003022,5.04e-34,2;UBERON:0002421,5.04e-34,2;UBERON:0002600,5.04e-34,2;UBERON:0000349,1.60e-14,5;UBERON:0002021,1.83e-14,5;UBERON:0002619,1.41e-12,22;UBERON:0000002,2.19e-12,6;UBERON:0001560,2.19e-12,6;UBERON:0000956,2.91e-11,25;UBERON:0000203,2.91e-11,25;UBERON:0002791,4.11e-09,32;UBERON:0001869,4.11e-09,32;UBERON:0003528,1.18e-08,34;UBERON:0002020,1.18e-08,34;UBERON:0001893,1.18e-08,34;UBERON:0002780,2.17e-07,41;UBERON:0001890,2.17e-07,41;UBERON:0003080,2.17e-07,41;UBERON:0006240,2.17e-07,41 | |||
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|short_description=p29@TPD52 | |||
}} |
Revision as of 06:07, 14 September 2013
Short description: | p29@TPD52 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_29_at_TPD52_5end |
Coexpression cluster: | C285_cervical_Hep2_small_colon_temporal_duodenum_bronchogenic |
Association with transcript: | -22bp_to_ENST00000523395_5end |
EntrezGene: | TPD52 |
HGNC: | 12005 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 5.04e-34 | 2 |
lobe parts of cerebral cortex | 5.04e-34 | 2 |
hippocampal formation | 5.04e-34 | 2 |
limbic lobe | 5.04e-34 | 2 |
limbic system | 1.60e-14 | 5 |
occipital lobe | 1.83e-14 | 5 |
regional part of cerebral cortex | 1.41e-12 | 22 |
uterine cervix | 2.19e-12 | 6 |
neck of organ | 2.19e-12 | 6 |
cerebral cortex | 2.91e-11 | 25 |
pallium | 2.91e-11 | 25 |
regional part of telencephalon | 4.11e-09 | 32 |
cerebral hemisphere | 4.11e-09 | 32 |
brain grey matter | 1.18e-08 | 34 |
gray matter | 1.18e-08 | 34 |
telencephalon | 1.18e-08 | 34 |
regional part of forebrain | 2.17e-07 | 41 |
forebrain | 2.17e-07 | 41 |
anterior neural tube | 2.17e-07 | 41 |
future forebrain | 2.17e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 1.40e-14 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.