FFCP PHASE1:Hg19::chr8:74371011..74371040,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=27067|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11371|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000522818_5end|description=CAGE_peak_3_at_STAU2_5end|id=chr8:74371011..74371040,-|ontology_enrichment_celltype=CL:0000136!1.64e-15!15;CL:0002334!1.96e-12!12;CL:0000077!7.67e-09!19;CL:0002580!2.94e-07!3;CL:0002615!3.00e-07!3;CL:0000153!3.47e-07!9;CL:0000447!3.47e-07!9;CL:0002579!4.79e-07!3;CL:0000174!9.41e-07!3|ontology_enrichment_celltype_v019=CL:0000136;5.18e-36;13!CL:0002615;3.48e-18;3!CL:0002580;4.96e-18;3!CL:0002334;2.84e-17;12!CL:0000197;1.85e-16;6!CL:0000098;1.85e-16;6!CL:0002167;1.85e-16;6!CL:0002579;4.60e-09;3!CL:0000214;6.46e-09;3!CL:0002581;2.44e-07;1!CL:0002616;2.44e-07;1|ontology_enrichment_celltype_v019_2=CL:0000136,5.80e-31,15;CL:0002580,5.43e-18,3;CL:0002615,5.76e-18,3;CL:0002334,2.76e-17,12;CL:0000197,1.97e-16,6;CL:0000098,1.97e-16,6;CL:0002167,1.97e-16,6;CL:0002579,4.79e-09,3;CL:0000214,5.85e-09,3;CL:0002581,1.97e-07,1;CL:0002616,2.23e-07,1|ontology_enrichment_development_v019=UBERON:0010227;4.88e-07;1!UBERON:0005425;4.88e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:5662;4.88e-07;1|ontology_enrichment_disease_v019_2=DOID:5662,3.62e-07,1|ontology_enrichment_uberon=UBERON:0003688!1.21e-12!6;UBERON:0002358!1.21e-12!6;UBERON:0003684!1.21e-12!6;UBERON:0001178!1.21e-12!6;UBERON:0004457!2.11e-10!12;UBERON:0000042!2.11e-10!12|ontology_enrichment_uberon_v019=UBERON:0004457;1.67e-31;9!UBERON:0000042;1.67e-31;9!UBERON:0003688;1.30e-24;6!UBERON:0002358;1.30e-24;6!UBERON:0003684;1.30e-24;6!UBERON:0001178;1.30e-24;6!UBERON:0005406;5.27e-13;2!UBERON:0000310;1.89e-09;10!UBERON:0006915;6.46e-09;3!UBERON:0007616;6.46e-09;3!UBERON:0002217;6.46e-09;3!UBERON:0002018;6.46e-09;3!UBERON:0001443;1.34e-08;11!UBERON:0007029;4.88e-07;1!UBERON:0002079;4.88e-07;1!UBERON:0000941;4.88e-07;1!UBERON:0001785;4.88e-07;1!UBERON:0002464;4.88e-07;1!UBERON:0004904;4.88e-07;1!UBERON:0001021;4.88e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.07e-24,6;UBERON:0002358,2.07e-24,6;UBERON:0003684,2.07e-24,6;UBERON:0001178,2.07e-24,6;UBERON:0004457,2.52e-23,12;UBERON:0000042,2.52e-23,12;UBERON:0005406,3.90e-13,2;UBERON:0000310,1.79e-09,10;UBERON:0006915,5.85e-09,3;UBERON:0007616,5.85e-09,3;UBERON:0002217,5.85e-09,3;UBERON:0002018,5.85e-09,3;UBERON:0001443,1.27e-08,11;UBERON:0004923,3.37e-07,66;UBERON:0007029,4.34e-07,1;UBERON:0002079,4.60e-07,1;UBERON:0000941,4.89e-07,1;UBERON:0001785,4.89e-07,1;UBERON:0002464,4.89e-07,1;UBERON:0004904,4.89e-07,1;UBERON:0001021,4.89e-07,1;UBERON:0003902,4.89e-07,1;UBERON:0005425,4.89e-07,1|phase1_expression=0.54503513781167,1.49870366723688,3.66481450649525,1.0007329835313,1.34088328328186,2.61701557230111,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0.486634870302636,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0.640672166455702,0.847727604638247,0,0.103052529238439,0.257640540045629,0.18611685633159,0,0,0,0.460249493211497,0.646584227275248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0,0,0,0.325736184293735,0,0,0.904318131178758,6.10073421020206,2.59929777073348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24782516918484,2.85486382075459,9.30444248700215,5.03708084468667,0.601892199455438,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23297027036899,1.07423381301644,1.68396056659844,3.58789617915963,2.55853624533352,0.321707842287215,2.96836132889982,0,0.355123450626254,0.0821271560138091,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0.366277859273374,1.15513299888823,0,0,0,0,0,0,0,0,0.145016693914229,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47775344708365,4.28083360847872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,0,0,0,1.78178808499583,0.921482106297696,0,0,0,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,8.16026705054211,3.5096585163178,4.59518365145192,6.88532524490589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0.457680136793847,0.151230923763239,0,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0,0.400027764663154,0,0,0,0.385239660814607,2.14441591374926,0,0,0.231522474323834,0,0.358177682162975,2.16161013012681,0.438568099157414,0,0.578742114812744,0,0,0,0,0,0.194860308839388,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,3.81234698296116,0.381382095467167,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0.354809480650555,0,1.54339208493677,0,0,0,0,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0.860454717640555,0,0,0,1.3746412112643,0,0,0,0,0,0,0,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.240724100067505,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0,0,0,0,0.0636471582781649,0.202117188958219,0,0,0.202056159043763,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0,0,0,0|short_description=p3@STAU2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=27067 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11371 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000522818_5end | |||
|description=CAGE_peak_3_at_STAU2_5end | |||
|id=chr8:74371011..74371040,- | |||
|ontology_enrichment_celltype=CL:0000136!1.64e-15!15;CL:0002334!1.96e-12!12;CL:0000077!7.67e-09!19;CL:0002580!2.94e-07!3;CL:0002615!3.00e-07!3;CL:0000153!3.47e-07!9;CL:0000447!3.47e-07!9;CL:0002579!4.79e-07!3;CL:0000174!9.41e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000136;5.18e-36;13!CL:0002615;3.48e-18;3!CL:0002580;4.96e-18;3!CL:0002334;2.84e-17;12!CL:0000197;1.85e-16;6!CL:0000098;1.85e-16;6!CL:0002167;1.85e-16;6!CL:0002579;4.60e-09;3!CL:0000214;6.46e-09;3!CL:0002581;2.44e-07;1!CL:0002616;2.44e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,5.80e-31,15;CL:0002580,5.43e-18,3;CL:0002615,5.76e-18,3;CL:0002334,2.76e-17,12;CL:0000197,1.97e-16,6;CL:0000098,1.97e-16,6;CL:0002167,1.97e-16,6;CL:0002579,4.79e-09,3;CL:0000214,5.85e-09,3;CL:0002581,1.97e-07,1;CL:0002616,2.23e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0010227;4.88e-07;1!UBERON:0005425;4.88e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;4.88e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,3.62e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!1.21e-12!6;UBERON:0002358!1.21e-12!6;UBERON:0003684!1.21e-12!6;UBERON:0001178!1.21e-12!6;UBERON:0004457!2.11e-10!12;UBERON:0000042!2.11e-10!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.67e-31;9!UBERON:0000042;1.67e-31;9!UBERON:0003688;1.30e-24;6!UBERON:0002358;1.30e-24;6!UBERON:0003684;1.30e-24;6!UBERON:0001178;1.30e-24;6!UBERON:0005406;5.27e-13;2!UBERON:0000310;1.89e-09;10!UBERON:0006915;6.46e-09;3!UBERON:0007616;6.46e-09;3!UBERON:0002217;6.46e-09;3!UBERON:0002018;6.46e-09;3!UBERON:0001443;1.34e-08;11!UBERON:0007029;4.88e-07;1!UBERON:0002079;4.88e-07;1!UBERON:0000941;4.88e-07;1!UBERON:0001785;4.88e-07;1!UBERON:0002464;4.88e-07;1!UBERON:0004904;4.88e-07;1!UBERON:0001021;4.88e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.07e-24,6;UBERON:0002358,2.07e-24,6;UBERON:0003684,2.07e-24,6;UBERON:0001178,2.07e-24,6;UBERON:0004457,2.52e-23,12;UBERON:0000042,2.52e-23,12;UBERON:0005406,3.90e-13,2;UBERON:0000310,1.79e-09,10;UBERON:0006915,5.85e-09,3;UBERON:0007616,5.85e-09,3;UBERON:0002217,5.85e-09,3;UBERON:0002018,5.85e-09,3;UBERON:0001443,1.27e-08,11;UBERON:0004923,3.37e-07,66;UBERON:0007029,4.34e-07,1;UBERON:0002079,4.60e-07,1;UBERON:0000941,4.89e-07,1;UBERON:0001785,4.89e-07,1;UBERON:0002464,4.89e-07,1;UBERON:0004904,4.89e-07,1;UBERON:0001021,4.89e-07,1;UBERON:0003902,4.89e-07,1;UBERON:0005425,4.89e-07,1 | |||
|phase1_expression=0.54503513781167,1.49870366723688,3.66481450649525,1.0007329835313,1.34088328328186,2.61701557230111,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0.486634870302636,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0.640672166455702,0.847727604638247,0,0.103052529238439,0.257640540045629,0.18611685633159,0,0,0,0.460249493211497,0.646584227275248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0,0,0,0.325736184293735,0,0,0.904318131178758,6.10073421020206,2.59929777073348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24782516918484,2.85486382075459,9.30444248700215,5.03708084468667,0.601892199455438,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23297027036899,1.07423381301644,1.68396056659844,3.58789617915963,2.55853624533352,0.321707842287215,2.96836132889982,0,0.355123450626254,0.0821271560138091,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0.366277859273374,1.15513299888823,0,0,0,0,0,0,0,0,0.145016693914229,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47775344708365,4.28083360847872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,0,0,0,1.78178808499583,0.921482106297696,0,0,0,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,8.16026705054211,3.5096585163178,4.59518365145192,6.88532524490589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0.457680136793847,0.151230923763239,0,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0,0.400027764663154,0,0,0,0.385239660814607,2.14441591374926,0,0,0.231522474323834,0,0.358177682162975,2.16161013012681,0.438568099157414,0,0.578742114812744,0,0,0,0,0,0.194860308839388,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,3.81234698296116,0.381382095467167,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0.354809480650555,0,1.54339208493677,0,0,0,0,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0.860454717640555,0,0,0,1.3746412112643,0,0,0,0,0,0,0,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.240724100067505,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0,0,0,0,0.0636471582781649,0.202117188958219,0,0,0.202056159043763,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@STAU2 | |||
}} |
Revision as of 06:01, 14 September 2013
Short description: | p3@STAU2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_STAU2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000522818_5end |
EntrezGene: | STAU2 |
HGNC: | 11371 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 5.80e-31 | 15 |
preadipocyte of the breast | 5.43e-18 | 3 |
adipocyte of omentum tissue | 5.76e-18 | 3 |
preadipocyte | 2.76e-17 | 12 |
receptor cell | 1.97e-16 | 6 |
sensory epithelial cell | 1.97e-16 | 6 |
olfactory epithelial cell | 1.97e-16 | 6 |
omentum preadipocyte | 4.79e-09 | 3 |
synovial cell | 5.85e-09 | 3 |
perirenal preadipocyte | 1.97e-07 | 1 |
perirenal adipocyte cell | 2.23e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.07e-24 | 6 |
peritoneum | 2.07e-24 | 6 |
abdominal cavity | 2.07e-24 | 6 |
visceral peritoneum | 2.07e-24 | 6 |
cavity lining | 2.52e-23 | 12 |
serous membrane | 2.52e-23 | 12 |
perirenal fat | 3.90e-13 | 2 |
breast | 1.79e-09 | 10 |
stratified squamous epithelium | 5.85e-09 | 3 |
layer of synovial tissue | 5.85e-09 | 3 |
synovial joint | 5.85e-09 | 3 |
synovial membrane of synovial joint | 5.85e-09 | 3 |
chest | 1.27e-08 | 11 |
organ component layer | 3.37e-07 | 66 |
surface | 4.34e-07 | 1 |
left cardiac atrium | 4.60e-07 | 1 |
cranial nerve II | 4.89e-07 | 1 |
cranial nerve | 4.89e-07 | 1 |
nerve trunk | 4.89e-07 | 1 |
nerve connecting eye with brain | 4.89e-07 | 1 |
nerve | 4.89e-07 | 1 |
retinal neural layer | 4.89e-07 | 1 |
presumptive neural retina | 4.89e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 3.62e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.