FFCP PHASE1:Hg19::chr8:72274290..72274320,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2138|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3519|TSSclassifier=S|UniProt=E7EQM5|association_with_transcript=50bp_to_ENST00000388741_5end|coexpression_cluster_id=C4770|description=CAGE_peak_2_at_EYA1_5end|id=chr8:72274290..72274320,-|ontology_enrichment_celltype=CL:0000062!9.16e-07!11;CL:0000375!9.16e-07!11;CL:0000335!9.16e-07!11|ontology_enrichment_celltype_v019=CL:0002552;4.39e-10;5!CL:0000062;5.41e-09;9!CL:0002556;1.68e-07;6|ontology_enrichment_celltype_v019_2=CL:0002552,3.95e-10,5;CL:0002556,1.68e-07,6;CL:0000062,4.38e-07,11;CL:0000375,4.38e-07,11;CL:0000335,4.38e-07,11|ontology_enrichment_development_v019=CL:0000335;4.10e-07;11|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:171;1.22e-07;10|ontology_enrichment_disease_v019_2=DOID:171,1.84e-07,10|ontology_enrichment_uberon=UBERON:0000153!1.88e-21!129;UBERON:0007811!1.88e-21!129;UBERON:0000924!2.68e-21!173;UBERON:0006601!2.68e-21!173;UBERON:0001017!1.29e-20!82;UBERON:0000033!2.12e-20!123;UBERON:0004121!5.06e-20!169;UBERON:0000073!7.82e-20!94;UBERON:0001016!7.82e-20!94;UBERON:0005743!8.17e-20!86;UBERON:0000955!3.15e-17!69;UBERON:0006238!3.15e-17!69;UBERON:0002616!2.61e-16!59;UBERON:0001049!1.47e-15!57;UBERON:0005068!1.47e-15!57;UBERON:0006241!1.47e-15!57;UBERON:0007135!1.47e-15!57;UBERON:0002346!4.78e-14!90;UBERON:0002780!1.55e-13!41;UBERON:0001890!1.55e-13!41;UBERON:0006240!1.55e-13!41;UBERON:0000475!2.48e-13!365;UBERON:0003080!6.21e-13!42;UBERON:0003075!7.73e-13!86;UBERON:0007284!7.73e-13!86;UBERON:0003056!5.15e-11!61;UBERON:0001893!8.18e-11!34;UBERON:0000481!8.55e-11!347;UBERON:0002020!1.68e-10!34;UBERON:0003528!1.68e-10!34;UBERON:0002791!1.75e-10!33;UBERON:0001869!4.86e-10!32;UBERON:0007023!1.09e-09!115;UBERON:0000922!3.17e-09!612;UBERON:0002619!6.70e-08!22;UBERON:0000477!1.04e-07!286;UBERON:0002050!2.69e-07!605;UBERON:0005423!2.69e-07!605;UBERON:0000923!4.89e-07!604;UBERON:0005291!4.89e-07!604;UBERON:0006598!4.89e-07!604;UBERON:0002532!4.89e-07!604;UBERON:0001950!5.95e-07!20;UBERON:0000956!6.42e-07!25;UBERON:0000203!6.42e-07!25;UBERON:0000165!7.53e-07!28;UBERON:0000930!7.53e-07!28;UBERON:0000468!9.87e-07!659|ontology_enrichment_uberon_v019=UBERON:0003129;1.34e-08;7!UBERON:0001758;1.68e-07;6!UBERON:0003672;1.68e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0011216,6.24e-11,223;UBERON:0004121,3.61e-09,171;UBERON:0000924,3.61e-09,171;UBERON:0006601,3.61e-09,171;UBERON:0003129,1.13e-08,7;UBERON:0001758,1.68e-07,6;UBERON:0003672,1.68e-07,6;UBERON:0001016,2.66e-07,89|phase1_expression=0.908391896352783,0,0,0,0,0,0,0,0,0,0,0,0,0.618831764800233,0,0,0.602694528023977,0,0,2.09305798730539,0.408001382488506,2.5076377718247,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0.919421224478927,1.204823675113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.850813354476611,0.665188192387692,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0,0,0.976248230192678,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0.709336764396714,0,0,0,0,0.134710672069688,0.163461903113459,12.7140239221742,5.76175924479999,0,0.312160076830321,0,0,0,0,0,3.87892925384297,5.40470996171779,19.4252468610439,34.4520828611796,13.5996811103206,0,0,2.18836948140286,2.62748891731125,3.3247693858102,8.77955241761676,0.919463387397059,5.70904623845068,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339121184620975,0.57978255948989,0,0,0.609868530647977,0.397589304964456,1.16193942869518,2.48786532036889,1.51392510525377,0.36497735907583,0,3.21620469096443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.185176890317059,0,0,0,1.39116485970092,0.234817388471643,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79409734952577,1.74384027533312,0.80672114403045,0,7.15312891703765,0.845302752556,0,0,1.02882949704857,0,0.799266537048298,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.289562613335158,0.821905290201534,0.716243852959582,0,0,0,0,0,3.90419561572865,0.773288812777695,0.670065061337395,0,0,0,0,1.10422342547226,0.500170521059677,0.542530047399471,1.24782516918484,1.42743191037729,0.630809660135739,2.10854546986884,3.61135319673263,2.27407504055985,4.1389228517002,1.32845119707087,0.368738337083406,2.5196248195744,0,0,0,0,0,0,0,0,0.496215615637554,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0.40101294060657,0,2.52591785962135,3.45973219212762,3.8026080338233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.76161217055386,4.45551299571175,0,0,0,0.870036464629098,1.23238893691716,0.614014698904518,0.137836572484531,7.62683738564743,3.0453505721988,0.255679882248303,3.02708921198907,0.495854746082934,0.768760269460425,5.35973392477253,1.6185244936888,0,0,0,0,0,0,0,0,2.60510858551767,0,0.190630193923825,0,0,0.318203247925937,0,1.7987245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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2138 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3519 | |||
|TSSclassifier=S | |||
|UniProt=E7EQM5 | |||
|association_with_transcript=50bp_to_ENST00000388741_5end | |||
|coexpression_cluster_id=C4770 | |||
|description=CAGE_peak_2_at_EYA1_5end | |||
|id=chr8:72274290..72274320,- | |||
|ontology_enrichment_celltype=CL:0000062!9.16e-07!11;CL:0000375!9.16e-07!11;CL:0000335!9.16e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0002552;4.39e-10;5!CL:0000062;5.41e-09;9!CL:0002556;1.68e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002552,3.95e-10,5;CL:0002556,1.68e-07,6;CL:0000062,4.38e-07,11;CL:0000375,4.38e-07,11;CL:0000335,4.38e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000335;4.10e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;1.22e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.84e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000153!1.88e-21!129;UBERON:0007811!1.88e-21!129;UBERON:0000924!2.68e-21!173;UBERON:0006601!2.68e-21!173;UBERON:0001017!1.29e-20!82;UBERON:0000033!2.12e-20!123;UBERON:0004121!5.06e-20!169;UBERON:0000073!7.82e-20!94;UBERON:0001016!7.82e-20!94;UBERON:0005743!8.17e-20!86;UBERON:0000955!3.15e-17!69;UBERON:0006238!3.15e-17!69;UBERON:0002616!2.61e-16!59;UBERON:0001049!1.47e-15!57;UBERON:0005068!1.47e-15!57;UBERON:0006241!1.47e-15!57;UBERON:0007135!1.47e-15!57;UBERON:0002346!4.78e-14!90;UBERON:0002780!1.55e-13!41;UBERON:0001890!1.55e-13!41;UBERON:0006240!1.55e-13!41;UBERON:0000475!2.48e-13!365;UBERON:0003080!6.21e-13!42;UBERON:0003075!7.73e-13!86;UBERON:0007284!7.73e-13!86;UBERON:0003056!5.15e-11!61;UBERON:0001893!8.18e-11!34;UBERON:0000481!8.55e-11!347;UBERON:0002020!1.68e-10!34;UBERON:0003528!1.68e-10!34;UBERON:0002791!1.75e-10!33;UBERON:0001869!4.86e-10!32;UBERON:0007023!1.09e-09!115;UBERON:0000922!3.17e-09!612;UBERON:0002619!6.70e-08!22;UBERON:0000477!1.04e-07!286;UBERON:0002050!2.69e-07!605;UBERON:0005423!2.69e-07!605;UBERON:0000923!4.89e-07!604;UBERON:0005291!4.89e-07!604;UBERON:0006598!4.89e-07!604;UBERON:0002532!4.89e-07!604;UBERON:0001950!5.95e-07!20;UBERON:0000956!6.42e-07!25;UBERON:0000203!6.42e-07!25;UBERON:0000165!7.53e-07!28;UBERON:0000930!7.53e-07!28;UBERON:0000468!9.87e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0003129;1.34e-08;7!UBERON:0001758;1.68e-07;6!UBERON:0003672;1.68e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,6.24e-11,223;UBERON:0004121,3.61e-09,171;UBERON:0000924,3.61e-09,171;UBERON:0006601,3.61e-09,171;UBERON:0003129,1.13e-08,7;UBERON:0001758,1.68e-07,6;UBERON:0003672,1.68e-07,6;UBERON:0001016,2.66e-07,89 | |||
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| |||
|short_description=p2@EYA1 | |||
}} |
Revision as of 05:59, 14 September 2013
Short description: | p2@EYA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_EYA1_5end |
Coexpression cluster: | C4770_Fibroblast_dura_glioblastoma_glioma_neuroblastoma_small_osteosarcoma |
Association with transcript: | 50bp_to_ENST00000388741_5end |
EntrezGene: | EYA1 |
HGNC: | 3519 |
UniProt: | E7EQM5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 3.95e-10 | 5 |
fibroblast of periodontium | 1.68e-07 | 6 |
osteoblast | 4.38e-07 | 11 |
osteoprogenitor cell | 4.38e-07 | 11 |
mesenchyme condensation cell | 4.38e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 6.24e-11 | 223 |
ectoderm-derived structure | 3.61e-09 | 171 |
ectoderm | 3.61e-09 | 171 |
presumptive ectoderm | 3.61e-09 | 171 |
skull | 1.13e-08 | 7 |
periodontium | 1.68e-07 | 6 |
dentition | 1.68e-07 | 6 |
nervous system | 2.66e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.84e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.