FFCP PHASE1:Hg19::chr8:38662960..38663003,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6867|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11522|TSSclassifier=S|UniProt=E5RIP3|association_with_transcript=0bp_to_ENST00000522955,ENST00000524193,uc011lcc.1_5end|coexpression_cluster_id=C623|description=CAGE_peak_9_at_TACC1_5end|id=chr8:38662960..38663003,+|ontology_enrichment_celltype=CL:0000766!8.93e-49!76;CL:0000557!1.91e-43!71;CL:0000839!2.44e-41!70;CL:0002009!1.55e-40!65;CL:0002194!1.85e-39!63;CL:0000576!1.85e-39!63;CL:0000040!1.85e-39!63;CL:0000559!1.85e-39!63;CL:0000738!1.90e-36!140;CL:0000763!4.38e-35!112;CL:0000049!4.38e-35!112;CL:0002057!7.98e-34!42;CL:0000037!1.87e-30!172;CL:0000566!1.87e-30!172;CL:0000860!3.12e-30!45;CL:0002031!2.21e-29!124;CL:0002032!1.35e-28!165;CL:0000837!1.35e-28!165;CL:0002087!3.21e-28!119;CL:0000988!9.07e-28!182;CL:0002139!1.06e-08!24;CL:0000115!1.04e-07!35;CL:0002393!1.12e-07!9;CL:0002397!1.12e-07!9|ontology_enrichment_celltype_v019=CL:0000473;7.08e-39;39!CL:0000234;7.08e-39;39!CL:0000860;2.76e-38;33!CL:0002057;2.76e-38;33!CL:0000576;5.24e-35;48!CL:0000766;1.07e-32;69!CL:0000763;5.93e-15;100!CL:0000738;3.08e-11;136!CL:0000235;1.01e-09;6!CL:0000094;2.64e-09;8!CL:0002087;7.11e-09;104!CL:0000840;1.28e-08;5!CL:0000097;2.72e-07;5!CL:0000451;4.22e-07;10|ontology_enrichment_celltype_v019_2=CL:0000766,3.07e-80,72;CL:0000557,1.14e-71,67;CL:0000839,1.36e-68,66;CL:0002009,8.39e-67,61;CL:0002194,3.91e-65,59;CL:0000576,3.91e-65,59;CL:0000040,3.91e-65,59;CL:0000559,3.91e-65,59;CL:0000473,5.37e-59,48;CL:0000234,5.37e-59,48;CL:0000763,9.01e-52,108;CL:0000049,9.01e-52,108;CL:0000860,1.81e-50,42;CL:0002057,1.81e-50,42;CL:0000738,6.35e-46,136;CL:0002031,5.33e-36,120;CL:0000037,1.95e-34,168;CL:0002087,1.02e-32,115;CL:0002032,1.99e-31,161;CL:0000837,1.99e-31,161;CL:0000988,2.12e-31,177;CL:0000235,1.02e-09,6;CL:0002393,1.39e-09,9;CL:0002397,1.39e-09,9;CL:0000094,1.87e-09,8;CL:0000840,1.48e-08,5;CL:0001029,1.48e-08,5;CL:0000097,2.61e-07,5;CL:0002028,2.61e-07,5;CL:0000451,5.07e-07,10|ontology_enrichment_development_v019=CL:0002057;1.87e-36;42!CL:0000049;7.09e-15;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!3.25e-46!112;UBERON:0002390!1.57e-44!102;UBERON:0003061!1.57e-44!102;UBERON:0002371!2.09e-36!80;UBERON:0001474!7.19e-32!86;UBERON:0002405!5.14e-31!115;UBERON:0007023!8.43e-28!115;UBERON:0003081!4.16e-26!216;UBERON:0004765!1.33e-24!101;UBERON:0001434!1.33e-24!101;UBERON:0002204!1.62e-11!167;UBERON:0001049!9.29e-09!57;UBERON:0005068!9.29e-09!57;UBERON:0006241!9.29e-09!57;UBERON:0007135!9.29e-09!57;UBERON:0000178!1.60e-07!15;UBERON:0000179!1.60e-07!15;UBERON:0000463!1.60e-07!15;UBERON:0003080!4.46e-07!42;UBERON:0002780!8.87e-07!41;UBERON:0001890!8.87e-07!41;UBERON:0006240!8.87e-07!41|ontology_enrichment_uberon_v019=UBERON:0000178;1.09e-10;15!UBERON:0000179;1.09e-10;15!UBERON:0000463;1.09e-10;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.46e-69,98;UBERON:0003061,5.46e-69,98;UBERON:0002193,9.68e-64,108;UBERON:0002371,1.20e-60,76;UBERON:0001474,1.21e-54,82;UBERON:0002405,4.86e-53,93;UBERON:0004765,6.80e-48,90;UBERON:0001434,5.40e-41,100;UBERON:0003081,1.78e-37,203;UBERON:0002204,8.27e-20,167;UBERON:0000926,3.90e-18,315;UBERON:0004120,3.90e-18,315;UBERON:0006603,3.90e-18,315;UBERON:0007023,5.63e-11,114;UBERON:0000178,1.26e-10,15;UBERON:0000179,1.26e-10,15;UBERON:0000463,1.26e-10,15;UBERON:0000923,2.33e-10,560;UBERON:0010316,2.33e-10,560;UBERON:0005291,2.33e-10,560;UBERON:0006598,2.33e-10,560;UBERON:0010317,2.33e-10,560;UBERON:0002532,2.33e-10,560;UBERON:0002050,4.74e-10,564;UBERON:0005423,8.40e-09,581;UBERON:0000922,4.83e-08,592|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0.382067028739756,0.328402357799783,0.0787107813136792,1.96682138424452,0,2.32224184974114,0,0,0,0.154934401160603,0,0,1.10799081706375,0.401088894940283,1.30206522429511,1.56740831967947,1.94336199611388,2.06060454107349,12.0680538187039,12.4699061417307,13.0995393041421,7.20530014407622,3.70051099219643,4.64559556342655,2.58923153089935,3.84241059793651,5.43909128743746,5.17118521104928,3.87290810150296,2.70852973188684,8.28266293987461,4.91231070104122,9.21366286224847,7.03992952453076,8.34415470397843,8.31138263538754,6.59702600373432,5.18605509816243,6.39337125799041,2.61188314765726,6.24123747160254,1.86846674698672,3.76872997885115,2.08593167368081,3.9093992046921,3.02699751316684,6.62899744777616,6.0127853613768,9.71774317034932,6.16552469898626,6.9187353017764,9.88491954089157,5.55654503513573,9.00063285503649,17.1007646244749,10.7415005687509,18.6317436839927,0,0.546138611262131,0,2.98711155796555,0,1.72425731986345,0,0,0,0,0.382273228125229,0,0,0,0,0,0.411202997999018,0.501559486172034,0,0,0,0.111410456885174,0,0,0,0.384273959177026,0.520237390239513,0,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0.637130828648193,0,0,0.903450714466637,0.76791966692651,3.74792179657038,0.710331756132051,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6867 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11522 | |||
|TSSclassifier=S | |||
|UniProt=E5RIP3 | |||
|association_with_transcript=0bp_to_ENST00000522955,ENST00000524193,uc011lcc.1_5end | |||
|coexpression_cluster_id=C623 | |||
|description=CAGE_peak_9_at_TACC1_5end | |||
|id=chr8:38662960..38663003,+ | |||
|ontology_enrichment_celltype=CL:0000766!8.93e-49!76;CL:0000557!1.91e-43!71;CL:0000839!2.44e-41!70;CL:0002009!1.55e-40!65;CL:0002194!1.85e-39!63;CL:0000576!1.85e-39!63;CL:0000040!1.85e-39!63;CL:0000559!1.85e-39!63;CL:0000738!1.90e-36!140;CL:0000763!4.38e-35!112;CL:0000049!4.38e-35!112;CL:0002057!7.98e-34!42;CL:0000037!1.87e-30!172;CL:0000566!1.87e-30!172;CL:0000860!3.12e-30!45;CL:0002031!2.21e-29!124;CL:0002032!1.35e-28!165;CL:0000837!1.35e-28!165;CL:0002087!3.21e-28!119;CL:0000988!9.07e-28!182;CL:0002139!1.06e-08!24;CL:0000115!1.04e-07!35;CL:0002393!1.12e-07!9;CL:0002397!1.12e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000473;7.08e-39;39!CL:0000234;7.08e-39;39!CL:0000860;2.76e-38;33!CL:0002057;2.76e-38;33!CL:0000576;5.24e-35;48!CL:0000766;1.07e-32;69!CL:0000763;5.93e-15;100!CL:0000738;3.08e-11;136!CL:0000235;1.01e-09;6!CL:0000094;2.64e-09;8!CL:0002087;7.11e-09;104!CL:0000840;1.28e-08;5!CL:0000097;2.72e-07;5!CL:0000451;4.22e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.07e-80,72;CL:0000557,1.14e-71,67;CL:0000839,1.36e-68,66;CL:0002009,8.39e-67,61;CL:0002194,3.91e-65,59;CL:0000576,3.91e-65,59;CL:0000040,3.91e-65,59;CL:0000559,3.91e-65,59;CL:0000473,5.37e-59,48;CL:0000234,5.37e-59,48;CL:0000763,9.01e-52,108;CL:0000049,9.01e-52,108;CL:0000860,1.81e-50,42;CL:0002057,1.81e-50,42;CL:0000738,6.35e-46,136;CL:0002031,5.33e-36,120;CL:0000037,1.95e-34,168;CL:0002087,1.02e-32,115;CL:0002032,1.99e-31,161;CL:0000837,1.99e-31,161;CL:0000988,2.12e-31,177;CL:0000235,1.02e-09,6;CL:0002393,1.39e-09,9;CL:0002397,1.39e-09,9;CL:0000094,1.87e-09,8;CL:0000840,1.48e-08,5;CL:0001029,1.48e-08,5;CL:0000097,2.61e-07,5;CL:0002028,2.61e-07,5;CL:0000451,5.07e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;1.87e-36;42!CL:0000049;7.09e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.25e-46!112;UBERON:0002390!1.57e-44!102;UBERON:0003061!1.57e-44!102;UBERON:0002371!2.09e-36!80;UBERON:0001474!7.19e-32!86;UBERON:0002405!5.14e-31!115;UBERON:0007023!8.43e-28!115;UBERON:0003081!4.16e-26!216;UBERON:0004765!1.33e-24!101;UBERON:0001434!1.33e-24!101;UBERON:0002204!1.62e-11!167;UBERON:0001049!9.29e-09!57;UBERON:0005068!9.29e-09!57;UBERON:0006241!9.29e-09!57;UBERON:0007135!9.29e-09!57;UBERON:0000178!1.60e-07!15;UBERON:0000179!1.60e-07!15;UBERON:0000463!1.60e-07!15;UBERON:0003080!4.46e-07!42;UBERON:0002780!8.87e-07!41;UBERON:0001890!8.87e-07!41;UBERON:0006240!8.87e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.09e-10;15!UBERON:0000179;1.09e-10;15!UBERON:0000463;1.09e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.46e-69,98;UBERON:0003061,5.46e-69,98;UBERON:0002193,9.68e-64,108;UBERON:0002371,1.20e-60,76;UBERON:0001474,1.21e-54,82;UBERON:0002405,4.86e-53,93;UBERON:0004765,6.80e-48,90;UBERON:0001434,5.40e-41,100;UBERON:0003081,1.78e-37,203;UBERON:0002204,8.27e-20,167;UBERON:0000926,3.90e-18,315;UBERON:0004120,3.90e-18,315;UBERON:0006603,3.90e-18,315;UBERON:0007023,5.63e-11,114;UBERON:0000178,1.26e-10,15;UBERON:0000179,1.26e-10,15;UBERON:0000463,1.26e-10,15;UBERON:0000923,2.33e-10,560;UBERON:0010316,2.33e-10,560;UBERON:0005291,2.33e-10,560;UBERON:0006598,2.33e-10,560;UBERON:0010317,2.33e-10,560;UBERON:0002532,2.33e-10,560;UBERON:0002050,4.74e-10,564;UBERON:0005423,8.40e-09,581;UBERON:0000922,4.83e-08,592 | |||
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| |||
|short_description=p9@TACC1 | |||
}} |
Revision as of 05:13, 14 September 2013
Short description: | p9@TACC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_TACC1_5end |
Coexpression cluster: | C623_Dendritic_Neutrophils_Eosinophils_Whole_Macrophage_CD14_Basophils |
Association with transcript: | 0bp_to_ENST00000522955, ENST00000524193, uc011lcc.1_5end |
EntrezGene: | TACC1 |
HGNC: | 11522 |
UniProt: | E5RIP3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.46e-69 | 98 |
blood island | 5.46e-69 | 98 |
hemolymphoid system | 9.68e-64 | 108 |
bone marrow | 1.20e-60 | 76 |
bone element | 1.21e-54 | 82 |
immune system | 4.86e-53 | 93 |
skeletal element | 6.80e-48 | 90 |
skeletal system | 5.40e-41 | 100 |
lateral plate mesoderm | 1.78e-37 | 203 |
musculoskeletal system | 8.27e-20 | 167 |
mesoderm | 3.90e-18 | 315 |
mesoderm-derived structure | 3.90e-18 | 315 |
presumptive mesoderm | 3.90e-18 | 315 |
adult organism | 5.63e-11 | 114 |
blood | 1.26e-10 | 15 |
haemolymphatic fluid | 1.26e-10 | 15 |
organism substance | 1.26e-10 | 15 |
germ layer | 2.33e-10 | 560 |
germ layer / neural crest | 2.33e-10 | 560 |
embryonic tissue | 2.33e-10 | 560 |
presumptive structure | 2.33e-10 | 560 |
germ layer / neural crest derived structure | 2.33e-10 | 560 |
epiblast (generic) | 2.33e-10 | 560 |
embryonic structure | 4.74e-10 | 564 |
developing anatomical structure | 8.40e-09 | 581 |
embryo | 4.83e-08 | 592 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.