FFCP PHASE1:Hg19::chr8:38644746..38644761,+: Difference between revisions
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{{FFCP | 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3,5.40159307158561,5.06827321959218,0.512483037175893,2.76344273384959,12.1543982470953,20.4622485504562,27.085582928675,26.8386977432993,23.5534167728416,8.19024622116032,15.4836932514843,61.2805157740018,14.399092501555,7.36172934889572,14.8104882508301,38.023568888978,13.0715224678807,10.2112040635194,11.8194679406265,2.42999305476938,3.23474434190045,4.71797825567689,2.94866023118438,2.0367903594483,7.01497236335553,7.31221009128113,10.0556085235184,15.9002175326709,5.28373691508397,4.80342448971282,17.9864731282249,6.124909547064,24.9851685625228,26.9223495018611,25.0625158719727,37.3311782918174,4.03314713954749,27.939529995544,25.3516763642006,2.85538840518309,4.51479505104718,4.12894031717091,5.68628655417205,6.70048863671962,15.6366659141539,10.3553988909015,9.54797866158119,13.5378591028663,11.9005990535077,8.59665412356402,33.0002435046592,5.2407013603231,6.80137996598408,25.4616694011348,21.0891086625739,21.7021136326243,29.4883517401667,3.28184885410932,0,10.9166459245645,7.73833475182331,16.9924028760662,6.96412386641773,7.0619581665953,8.49751845931284,7.96817669729542,19.0710095849673,23.1620314987116,10.9752326039948,14.0017649932273,29.1373386883421,5.08233515801063,24.9158340238235,22.0565590909944,21.8390669983243,11.7714308591791,10.9579046461139,7.55746569265175,0,23.7302126666499,2.68623139945635,9.18307260408189,33.7285048267004,16.0342272946051,4.76597177574985,4.7801173586306,15.8989722217241,2.58136415292167,12.5431920774399,10.4812487853764,8.89112805400951,7.3314197934096,3.41227024230752,7.64431151181946,1.23040974977572,7.95016892283468,0,1.94228651156368,3.4905354331124,13.9177731760584,8.74279787506451,9.82545746540844,15.7171112377481,8.68116662676251,8.92274048107784,1.8689887846723,9.05777061400041,7.79458996890241,2.40415516554353,0,31.3789851844999,2.12108892391463,10.9932741584369,23.4666656258398,23.246065017087,18.8619097303477,20.1125584476887,24.8807447578008,26.1845828523314,2.85686301769052,16.2331640989218,3.2898960342559,18.2584097061629,1.37618785021362,10.7504687363588,3.15543124386369,27.5365535273205,1.30905207102113,4.2322147241232,16.7397758175038,9.24351257262837,13.8440499879613,4.03732559472253,2.29457701123761,4.30774903438886,9.17899467677836,4.27547848424897,17.184346213016,1.50424523575425,12.1245917149183,5.62724673327975,16.5833887891756,12.9291244827369,6.61025343893041,7.61806180683969,8.13820263933677,12.2907934305799,9.53120831935214,10.9473112238444,5.2550469129137,4.13661821004227,5.81796611844978,11.4498490124799,9.25216449565525,9.31448998328838,4.63998631082555,6.72382279029607,19.307228228694,5.12003652007545,11.7320471201727,43.028988352369,15.0551585976823,11.3178651611537,5.83694001413976,37.5065135994783|short_description=p1@TACC1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=6867 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11522 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-19bp_to_ENST00000276520_5end | |||
|coexpression_cluster_id=C4751 | |||
|description=CAGE_peak_1_at_TACC1_5end | |||
|id=chr8:38644746..38644761,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.18e-27!76;CL:0000557!1.42e-24!71;CL:0000839!1.53e-23!70;CL:0000738!1.72e-23!140;CL:0002057!2.42e-23!42;CL:0002009!3.94e-21!65;CL:0002194!5.98e-20!63;CL:0000576!5.98e-20!63;CL:0000040!5.98e-20!63;CL:0000559!5.98e-20!63;CL:0000860!2.18e-19!45;CL:0002031!7.46e-18!124;CL:0000763!1.36e-14!112;CL:0000049!1.36e-14!112;CL:0002087!2.76e-14!119;CL:0000037!1.89e-13!172;CL:0000566!1.89e-13!172;CL:0000988!1.09e-12!182;CL:0002032!3.40e-12!165;CL:0000837!3.40e-12!165;CL:0000048!6.01e-10!430;CL:0000723!1.56e-08!436;CL:0000134!2.60e-08!358;CL:0000034!5.51e-08!444;CL:0002320!6.99e-08!365;CL:0002139!1.02e-07!24;CL:0000219!2.27e-07!390;CL:0000115!3.85e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.75e-17;33!CL:0002057;6.75e-17;33!CL:0000473;3.14e-15;39!CL:0000234;3.14e-15;39!CL:0000576;1.37e-14;48!CL:0000766;4.02e-14;69!CL:0002139;1.02e-07;24!CL:0000738;8.21e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.73e-31,72;CL:0000557,4.33e-28,67;CL:0000839,5.50e-27,66;CL:0000738,1.30e-25,136;CL:0002009,1.69e-24,61;CL:0000473,2.12e-24,48;CL:0000234,2.12e-24,48;CL:0000860,2.42e-23,42;CL:0002057,2.42e-23,42;CL:0002194,2.95e-23,59;CL:0000576,2.95e-23,59;CL:0000040,2.95e-23,59;CL:0000559,2.95e-23,59;CL:0002031,9.13e-20,120;CL:0000763,2.18e-16,108;CL:0000049,2.18e-16,108;CL:0002087,5.61e-16,115;CL:0000037,9.39e-15,168;CL:0000988,1.12e-13,177;CL:0002032,1.89e-13,161;CL:0000837,1.89e-13,161;CL:0000048,7.60e-11,427;CL:0000723,2.35e-09,433;CL:0000134,7.30e-09,354;CL:0000034,8.97e-09,441;CL:0002320,2.06e-08,361;CL:0000219,7.23e-08,386;CL:0002139,1.02e-07,24;CL:0000115,2.18e-07,36 | |||
|ontology_enrichment_development_v019=CL:0002057;4.03e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.11e-24!112;UBERON:0002371!4.32e-24!80;UBERON:0002390!1.33e-22!102;UBERON:0003061!1.33e-22!102;UBERON:0001474!1.52e-21!86;UBERON:0004765!2.76e-19!101;UBERON:0001434!2.76e-19!101;UBERON:0002405!9.29e-19!115;UBERON:0003081!6.50e-18!216;UBERON:0002204!1.20e-17!167;UBERON:0002384!1.82e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
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|short_description=p1@TACC1 | |||
}} |
Revision as of 05:13, 14 September 2013
Short description: | p1@TACC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TACC1_5end |
Coexpression cluster: | C4751_Mast_Eosinophils_Neutrophils_granulocyte_Dendritic_mucinous_Smooth |
Association with transcript: | -19bp_to_ENST00000276520_5end |
EntrezGene: | TACC1 |
HGNC: | 11522 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.73e-31 | 72 |
granulocyte monocyte progenitor cell | 4.33e-28 | 67 |
myeloid lineage restricted progenitor cell | 5.50e-27 | 66 |
leukocyte | 1.30e-25 | 136 |
macrophage dendritic cell progenitor | 1.69e-24 | 61 |
defensive cell | 2.12e-24 | 48 |
phagocyte | 2.12e-24 | 48 |
classical monocyte | 2.42e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.42e-23 | 42 |
monopoietic cell | 2.95e-23 | 59 |
monocyte | 2.95e-23 | 59 |
monoblast | 2.95e-23 | 59 |
promonocyte | 2.95e-23 | 59 |
hematopoietic lineage restricted progenitor cell | 9.13e-20 | 120 |
myeloid cell | 2.18e-16 | 108 |
common myeloid progenitor | 2.18e-16 | 108 |
nongranular leukocyte | 5.61e-16 | 115 |
hematopoietic stem cell | 9.39e-15 | 168 |
hematopoietic cell | 1.12e-13 | 177 |
hematopoietic oligopotent progenitor cell | 1.89e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.89e-13 | 161 |
multi fate stem cell | 7.60e-11 | 427 |
somatic stem cell | 2.35e-09 | 433 |
mesenchymal cell | 7.30e-09 | 354 |
stem cell | 8.97e-09 | 441 |
connective tissue cell | 2.06e-08 | 361 |
motile cell | 7.23e-08 | 386 |
endothelial cell of vascular tree | 1.02e-07 | 24 |
endothelial cell | 2.18e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
immune system | 2.98e-29 | 93 |
bone marrow | 2.87e-27 | 76 |
hemolymphoid system | 6.15e-27 | 108 |
hematopoietic system | 3.62e-25 | 98 |
blood island | 3.62e-25 | 98 |
bone element | 2.46e-24 | 82 |
lateral plate mesoderm | 7.28e-23 | 203 |
skeletal system | 1.95e-20 | 100 |
skeletal element | 8.15e-20 | 90 |
mesoderm | 3.36e-19 | 315 |
mesoderm-derived structure | 3.36e-19 | 315 |
presumptive mesoderm | 3.36e-19 | 315 |
musculoskeletal system | 5.63e-19 | 167 |
connective tissue | 5.13e-09 | 371 |
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