FFCP PHASE1:Hg19::chr8:22438009..22438035,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64236|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13992|TSSclassifier=S|UniProt=Q96JY6|association_with_transcript=6bp_to_,-6bp_to_ENST00000265810,ENST00000409417_5end|coexpression_cluster_id=C2526|description=CAGE_peak_4_at_PDLIM2_5end|id=chr8:22438009..22438035,+|ontology_enrichment_celltype=CL:0000037!3.97e-80!172;CL:0000566!3.97e-80!172;CL:0002032!4.16e-76!165;CL:0000837!4.16e-76!165;CL:0000988!5.94e-73!182;CL:0000738!3.29e-68!140;CL:0002087!9.84e-67!119;CL:0002031!6.35e-63!124;CL:0000763!2.08e-52!112;CL:0000049!2.08e-52!112;CL:0002009!3.21e-45!65;CL:0002194!4.41e-44!63;CL:0000576!4.41e-44!63;CL:0000040!4.41e-44!63;CL:0000559!4.41e-44!63;CL:0000766!1.10e-43!76;CL:0000557!1.44e-40!71;CL:0000839!8.33e-40!70;CL:0002057!4.56e-39!42;CL:0000860!3.20e-35!45;CL:0000838!3.72e-20!52;CL:0000542!1.70e-19!53;CL:0000051!1.70e-19!53;CL:0000134!4.73e-17!358;CL:0002320!6.19e-16!365;CL:0000791!1.14e-12!18;CL:0000789!1.14e-12!18;CL:0002420!1.14e-12!18;CL:0002419!1.14e-12!18;CL:0000790!1.14e-12!18;CL:0000219!4.10e-12!390;CL:0000084!2.93e-11!25;CL:0000827!2.93e-11!25;CL:0002393!1.66e-10!9;CL:0002397!1.66e-10!9;CL:0000625!5.05e-09!11;CL:0000945!1.59e-08!24;CL:0000826!1.59e-08!24;CL:0000048!7.07e-08!430;CL:0000723!7.79e-08!436;CL:0000034!2.16e-07!444|ontology_enrichment_celltype_v019=CL:0000576;6.82e-41;48!CL:0000860;6.03e-40;33!CL:0002057;6.03e-40;33!CL:0000473;1.12e-38;39!CL:0000234;1.12e-38;39!CL:0000766;6.71e-31;69!CL:0000763;1.69e-23;100!CL:0002087;5.03e-18;104!CL:0000738;3.50e-16;136!CL:0000988;1.00e-12;177!CL:0002393;3.98e-10;6!CL:0002397;3.98e-10;6!CL:0000625;6.61e-09;11!CL:0000791;2.01e-08;18!CL:0000789;2.01e-08;18!CL:0002419;2.01e-08;18!CL:0000084;1.23e-07;25!CL:0000235;1.60e-07;6!CL:0000219;5.93e-07;193!CL:0000542;7.13e-07;53|ontology_enrichment_celltype_v019_2=CL:0000037,1.22e-85,168;CL:0002032,7.29e-80,161;CL:0000837,7.29e-80,161;CL:0000988,1.03e-79,177;CL:0000738,1.39e-73,136;CL:0000763,1.30e-72,108;CL:0000049,1.30e-72,108;CL:0002087,1.58e-72,115;CL:0002194,1.49e-70,59;CL:0000576,1.49e-70,59;CL:0000040,1.49e-70,59;CL:0000559,1.49e-70,59;CL:0002009,5.10e-70,61;CL:0000766,4.83e-69,72;CL:0002031,1.69e-64,120;CL:0000473,4.61e-64,48;CL:0000234,4.61e-64,48;CL:0000557,4.37e-62,67;CL:0000839,3.95e-61,66;CL:0000860,8.32e-58,42;CL:0002057,8.32e-58,42;CL:0000134,2.84e-25,354;CL:0002320,3.35e-24,361;CL:0000219,1.92e-20,386;CL:0000048,6.64e-16,427;CL:0000723,2.77e-15,433;CL:0002393,6.19e-15,9;CL:0002397,6.19e-15,9;CL:0000034,1.74e-14,441;CL:0000838,1.02e-09,52;CL:0000542,2.04e-09,53;CL:0000051,2.04e-09,53;CL:0000625,5.21e-09,11;CL:0000791,1.69e-08,18;CL:0000789,1.69e-08,18;CL:0002420,1.69e-08,18;CL:0002419,1.69e-08,18;CL:0000790,1.69e-08,18;CL:0000084,1.01e-07,25;CL:0000827,1.01e-07,25;CL:0000235,1.58e-07,6|ontology_enrichment_development_v019=CL:0002057;3.19e-41;42!CL:0000049;7.72e-21;108!CL:0000790;2.01e-08;18!CL:0000051;7.13e-07;53|ontology_enrichment_disease=DOID:1240!2.07e-13!39;DOID:8692!1.31e-12!31;DOID:2531!4.02e-12!51;DOID:0060083!4.02e-12!51|ontology_enrichment_disease_v019=DOID:8692;2.38e-13;31!DOID:1240;3.26e-10;39!DOID:2531;5.41e-07;51!DOID:0060083;5.41e-07;51|ontology_enrichment_disease_v019_2=DOID:8692,2.84e-14,31;DOID:1240,8.35e-13,39;DOID:2531,1.98e-10,51;DOID:0060083,1.98e-10,51|ontology_enrichment_uberon=UBERON:0002390!1.58e-46!102;UBERON:0003061!1.58e-46!102;UBERON:0002193!3.91e-42!112;UBERON:0002371!6.68e-36!80;UBERON:0001474!1.08e-31!86;UBERON:0002405!4.58e-27!115;UBERON:0004765!3.46e-25!101;UBERON:0001434!3.46e-25!101;UBERON:0002384!7.08e-15!375;UBERON:0003081!3.99e-11!216;UBERON:0000178!6.12e-08!15;UBERON:0000179!6.12e-08!15;UBERON:0000463!6.12e-08!15;UBERON:0002204!1.33e-07!167|ontology_enrichment_uberon_v019=UBERON:0000178;4.56e-10;15!UBERON:0000179;4.56e-10;15!UBERON:0000463;4.56e-10;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.84e-64,98;UBERON:0003061,1.84e-64,98;UBERON:0002193,3.82e-58,108;UBERON:0002371,2.28e-54,76;UBERON:0001474,5.19e-49,82;UBERON:0002405,4.36e-48,93;UBERON:0004765,5.48e-43,90;UBERON:0001434,7.90e-37,100;UBERON:0002384,9.64e-23,371;UBERON:0003081,1.52e-20,203;UBERON:0002204,4.84e-15,167;UBERON:0000178,3.80e-10,15;UBERON:0000179,3.80e-10,15;UBERON:0000463,3.80e-10,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.0787107813136792,5.11373559903575,2.30297638858328,6.19264493264304,0,0.30120591877825,0,10.6904736800816,0.710846162437108,1.17440175733939,2.21598163412751,5.41470008169383,3.68918480216948,1.56740831967947,2.26725566213286,3.09090681161024,4.79814187972564,3.02300754951048,3.88134497900506,3.25400651667958,3.70051099219643,2.16794459626573,2.8769239232215,5.12321413058201,2.60130452877444,4.82643953031266,3.87290810150296,5.41705946377367,6.40023954444856,4.36649840092553,1.57306439111559,4.59125838556354,3.20929027076094,5.11469700639233,3.95821560224059,5.98390972864896,6.81959600852311,4.64334781805734,2.26954089876456,1.86846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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64236 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13992 | |||
|TSSclassifier=S | |||
|UniProt=Q96JY6 | |||
|association_with_transcript=6bp_to_,-6bp_to_ENST00000265810,ENST00000409417_5end | |||
|coexpression_cluster_id=C2526 | |||
|description=CAGE_peak_4_at_PDLIM2_5end | |||
|id=chr8:22438009..22438035,+ | |||
|ontology_enrichment_celltype=CL:0000037!3.97e-80!172;CL:0000566!3.97e-80!172;CL:0002032!4.16e-76!165;CL:0000837!4.16e-76!165;CL:0000988!5.94e-73!182;CL:0000738!3.29e-68!140;CL:0002087!9.84e-67!119;CL:0002031!6.35e-63!124;CL:0000763!2.08e-52!112;CL:0000049!2.08e-52!112;CL:0002009!3.21e-45!65;CL:0002194!4.41e-44!63;CL:0000576!4.41e-44!63;CL:0000040!4.41e-44!63;CL:0000559!4.41e-44!63;CL:0000766!1.10e-43!76;CL:0000557!1.44e-40!71;CL:0000839!8.33e-40!70;CL:0002057!4.56e-39!42;CL:0000860!3.20e-35!45;CL:0000838!3.72e-20!52;CL:0000542!1.70e-19!53;CL:0000051!1.70e-19!53;CL:0000134!4.73e-17!358;CL:0002320!6.19e-16!365;CL:0000791!1.14e-12!18;CL:0000789!1.14e-12!18;CL:0002420!1.14e-12!18;CL:0002419!1.14e-12!18;CL:0000790!1.14e-12!18;CL:0000219!4.10e-12!390;CL:0000084!2.93e-11!25;CL:0000827!2.93e-11!25;CL:0002393!1.66e-10!9;CL:0002397!1.66e-10!9;CL:0000625!5.05e-09!11;CL:0000945!1.59e-08!24;CL:0000826!1.59e-08!24;CL:0000048!7.07e-08!430;CL:0000723!7.79e-08!436;CL:0000034!2.16e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000576;6.82e-41;48!CL:0000860;6.03e-40;33!CL:0002057;6.03e-40;33!CL:0000473;1.12e-38;39!CL:0000234;1.12e-38;39!CL:0000766;6.71e-31;69!CL:0000763;1.69e-23;100!CL:0002087;5.03e-18;104!CL:0000738;3.50e-16;136!CL:0000988;1.00e-12;177!CL:0002393;3.98e-10;6!CL:0002397;3.98e-10;6!CL:0000625;6.61e-09;11!CL:0000791;2.01e-08;18!CL:0000789;2.01e-08;18!CL:0002419;2.01e-08;18!CL:0000084;1.23e-07;25!CL:0000235;1.60e-07;6!CL:0000219;5.93e-07;193!CL:0000542;7.13e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.22e-85,168;CL:0002032,7.29e-80,161;CL:0000837,7.29e-80,161;CL:0000988,1.03e-79,177;CL:0000738,1.39e-73,136;CL:0000763,1.30e-72,108;CL:0000049,1.30e-72,108;CL:0002087,1.58e-72,115;CL:0002194,1.49e-70,59;CL:0000576,1.49e-70,59;CL:0000040,1.49e-70,59;CL:0000559,1.49e-70,59;CL:0002009,5.10e-70,61;CL:0000766,4.83e-69,72;CL:0002031,1.69e-64,120;CL:0000473,4.61e-64,48;CL:0000234,4.61e-64,48;CL:0000557,4.37e-62,67;CL:0000839,3.95e-61,66;CL:0000860,8.32e-58,42;CL:0002057,8.32e-58,42;CL:0000134,2.84e-25,354;CL:0002320,3.35e-24,361;CL:0000219,1.92e-20,386;CL:0000048,6.64e-16,427;CL:0000723,2.77e-15,433;CL:0002393,6.19e-15,9;CL:0002397,6.19e-15,9;CL:0000034,1.74e-14,441;CL:0000838,1.02e-09,52;CL:0000542,2.04e-09,53;CL:0000051,2.04e-09,53;CL:0000625,5.21e-09,11;CL:0000791,1.69e-08,18;CL:0000789,1.69e-08,18;CL:0002420,1.69e-08,18;CL:0002419,1.69e-08,18;CL:0000790,1.69e-08,18;CL:0000084,1.01e-07,25;CL:0000827,1.01e-07,25;CL:0000235,1.58e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;3.19e-41;42!CL:0000049;7.72e-21;108!CL:0000790;2.01e-08;18!CL:0000051;7.13e-07;53 | |||
|ontology_enrichment_disease=DOID:1240!2.07e-13!39;DOID:8692!1.31e-12!31;DOID:2531!4.02e-12!51;DOID:0060083!4.02e-12!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.38e-13;31!DOID:1240;3.26e-10;39!DOID:2531;5.41e-07;51!DOID:0060083;5.41e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.84e-14,31;DOID:1240,8.35e-13,39;DOID:2531,1.98e-10,51;DOID:0060083,1.98e-10,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.58e-46!102;UBERON:0003061!1.58e-46!102;UBERON:0002193!3.91e-42!112;UBERON:0002371!6.68e-36!80;UBERON:0001474!1.08e-31!86;UBERON:0002405!4.58e-27!115;UBERON:0004765!3.46e-25!101;UBERON:0001434!3.46e-25!101;UBERON:0002384!7.08e-15!375;UBERON:0003081!3.99e-11!216;UBERON:0000178!6.12e-08!15;UBERON:0000179!6.12e-08!15;UBERON:0000463!6.12e-08!15;UBERON:0002204!1.33e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.56e-10;15!UBERON:0000179;4.56e-10;15!UBERON:0000463;4.56e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.84e-64,98;UBERON:0003061,1.84e-64,98;UBERON:0002193,3.82e-58,108;UBERON:0002371,2.28e-54,76;UBERON:0001474,5.19e-49,82;UBERON:0002405,4.36e-48,93;UBERON:0004765,5.48e-43,90;UBERON:0001434,7.90e-37,100;UBERON:0002384,9.64e-23,371;UBERON:0003081,1.52e-20,203;UBERON:0002204,4.84e-15,167;UBERON:0000178,3.80e-10,15;UBERON:0000179,3.80e-10,15;UBERON:0000463,3.80e-10,15 | |||
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| |||
|short_description=p4@PDLIM2 | |||
}} |
Revision as of 04:38, 14 September 2013
Short description: | p4@PDLIM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_PDLIM2_5end |
Coexpression cluster: | C2526_acute_CD14_CD14CD16_Whole_CD4_biphenotypic_Dendritic |
Association with transcript: | 6bp_to_, -6bp_to_ENST00000265810, ENST00000409417_5end |
EntrezGene: | PDLIM2 |
HGNC: | 13992 |
UniProt: | Q96JY6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.84e-64 | 98 |
blood island | 1.84e-64 | 98 |
hemolymphoid system | 3.82e-58 | 108 |
bone marrow | 2.28e-54 | 76 |
bone element | 5.19e-49 | 82 |
immune system | 4.36e-48 | 93 |
skeletal element | 5.48e-43 | 90 |
skeletal system | 7.90e-37 | 100 |
connective tissue | 9.64e-23 | 371 |
lateral plate mesoderm | 1.52e-20 | 203 |
musculoskeletal system | 4.84e-15 | 167 |
blood | 3.80e-10 | 15 |
haemolymphatic fluid | 3.80e-10 | 15 |
organism substance | 3.80e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.84e-14 | 31 |
leukemia | 8.35e-13 | 39 |
hematologic cancer | 1.98e-10 | 51 |
immune system cancer | 1.98e-10 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.