FFCP PHASE1:Hg19::chr7:157069496..157069512,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C554|description=CAGE_peak_at_chr7:157069496..157069512,-|id=chr7:157069496..157069512,-|ontology_enrichment_celltype=CL:0002393!1.46e-31!9;CL:0002397!1.46e-31!9;CL:0000738!1.27e-17!140;CL:0000037!1.39e-17!172;CL:0000566!1.39e-17!172;CL:0000988!3.75e-16!182;CL:0002032!1.16e-13!165;CL:0000837!1.16e-13!165;CL:0000623!1.24e-12!3;CL:0000825!1.24e-12!3;CL:0000767!2.53e-12!3;CL:0002031!2.95e-12!124;CL:0000875!6.39e-12!3;CL:0002396!6.39e-12!3;CL:0002087!1.16e-11!119;CL:0000842!1.19e-11!3;CL:0000766!6.82e-10!76;CL:0000763!4.31e-09!112;CL:0000049!4.31e-09!112;CL:0000224!7.65e-09!4;CL:0002057!2.93e-08!42;CL:0000557!4.97e-08!71;CL:0002274!9.25e-08!5;CL:0000457!9.25e-08!5;CL:0002191!9.25e-08!5;CL:0000097!9.25e-08!5;CL:0000831!9.25e-08!5;CL:0002028!9.25e-08!5;CL:0000860!1.46e-07!45;CL:0000839!4.63e-07!70;CL:0000791!7.45e-07!18;CL:0000789!7.45e-07!18;CL:0002420!7.45e-07!18;CL:0002419!7.45e-07!18;CL:0000790!7.45e-07!18|ontology_enrichment_celltype_v019=CL:0000623;8.26e-33;3!CL:0000767;5.35e-32;3!CL:0000097;4.44e-20;5!CL:0000875;1.32e-14;3!CL:0002396;1.32e-14;3!CL:0000094;2.08e-12;8!CL:0000163;2.03e-11;9!CL:0000081;3.58e-09;11!CL:0000625;5.29e-09;11!CL:0000766;5.77e-08;69!CL:0002393;7.33e-08;6!CL:0002397;7.33e-08;6|ontology_enrichment_celltype_v019_2=CL:0000623,8.26e-33,3;CL:0000825,8.26e-33,3;CL:0000767,6.28e-32,3;CL:0000097,4.44e-20,5;CL:0002028,4.44e-20,5;CL:0000738,8.42e-20,136;CL:0002393,1.69e-18,9;CL:0002397,1.69e-18,9;CL:0000037,1.32e-15,168;CL:0000988,1.07e-14,177;CL:0000875,1.74e-14,3;CL:0002396,1.74e-14,3;CL:0002032,2.61e-14,161;CL:0000837,2.61e-14,161;CL:0000766,5.63e-13,72;CL:0002031,9.45e-13,120;CL:0000094,2.20e-12,8;CL:0000163,2.03e-11,9;CL:0002087,2.68e-09,115;CL:0000081,3.73e-09,11;CL:0000625,4.67e-09,11;CL:0000763,3.13e-08,108;CL:0000049,3.13e-08,108;CL:0000839,5.21e-07,66;CL:0000838,6.56e-07,52;CL:0000557,6.77e-07,67;CL:0000542,9.03e-07,53;CL:0000051,9.03e-07,53|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!6.17e-13!102;UBERON:0003061!6.17e-13!102;UBERON:0002193!1.59e-12!112;UBERON:0002371!5.27e-09!80;UBERON:0001474!4.06e-08!86;UBERON:0002405!9.25e-07!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14691421479123,3.83829398097213,2.16742572642506,0,0,0,0,0,0.880801318004542,1.66198622559563,0.601633342410425,3.90619567288533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.425208599930087,0.419317291016752,0.561643155732475,0.750884464207532,0,1.42506371870624,1.19350006319454,0.91332076882317,0,0,0,0,0,0,0,0,0,0,0.382273228125229,9.25199300053181,1.68152568894461,0.263384084775077,0.983548850569165,0,0.616804496998528,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0.226618685395132,0,0,0,0,0,0,0.301150238155546,0,0,0,0,1.81446068902259,1.87208137048455,2.17236605824198,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.67114027500857,11.8178361801908,11.2355765749478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.91092280605782,6.90008239550455,15.6578504261293,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,3.45142721309787,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0.199579371432817,0.191505370132367,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C554 | |||
|description=CAGE_peak_at_chr7:157069496..157069512,- | |||
|id=chr7:157069496..157069512,- | |||
|ontology_enrichment_celltype=CL:0002393!1.46e-31!9;CL:0002397!1.46e-31!9;CL:0000738!1.27e-17!140;CL:0000037!1.39e-17!172;CL:0000566!1.39e-17!172;CL:0000988!3.75e-16!182;CL:0002032!1.16e-13!165;CL:0000837!1.16e-13!165;CL:0000623!1.24e-12!3;CL:0000825!1.24e-12!3;CL:0000767!2.53e-12!3;CL:0002031!2.95e-12!124;CL:0000875!6.39e-12!3;CL:0002396!6.39e-12!3;CL:0002087!1.16e-11!119;CL:0000842!1.19e-11!3;CL:0000766!6.82e-10!76;CL:0000763!4.31e-09!112;CL:0000049!4.31e-09!112;CL:0000224!7.65e-09!4;CL:0002057!2.93e-08!42;CL:0000557!4.97e-08!71;CL:0002274!9.25e-08!5;CL:0000457!9.25e-08!5;CL:0002191!9.25e-08!5;CL:0000097!9.25e-08!5;CL:0000831!9.25e-08!5;CL:0002028!9.25e-08!5;CL:0000860!1.46e-07!45;CL:0000839!4.63e-07!70;CL:0000791!7.45e-07!18;CL:0000789!7.45e-07!18;CL:0002420!7.45e-07!18;CL:0002419!7.45e-07!18;CL:0000790!7.45e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000623;8.26e-33;3!CL:0000767;5.35e-32;3!CL:0000097;4.44e-20;5!CL:0000875;1.32e-14;3!CL:0002396;1.32e-14;3!CL:0000094;2.08e-12;8!CL:0000163;2.03e-11;9!CL:0000081;3.58e-09;11!CL:0000625;5.29e-09;11!CL:0000766;5.77e-08;69!CL:0002393;7.33e-08;6!CL:0002397;7.33e-08;6 | |||
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|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.17e-13!102;UBERON:0003061!6.17e-13!102;UBERON:0002193!1.59e-12!112;UBERON:0002371!5.27e-09!80;UBERON:0001474!4.06e-08!86;UBERON:0002405!9.25e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr7:157069496..157069512,- | |||
}} |
Revision as of 00:13, 14 September 2013
Short description: | p@chr7:157069496..157069512, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:157069496..157069512, - |
Coexpression cluster: | C554_Mast_Natural_CD8_CD14_CD4_Basophils_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 8.26e-33 | 3 |
pro-NK cell | 8.26e-33 | 3 |
basophil | 6.28e-32 | 3 |
mast cell | 4.44e-20 | 5 |
basophil mast progenitor cell | 4.44e-20 | 5 |
leukocyte | 8.42e-20 | 136 |
intermediate monocyte | 1.69e-18 | 9 |
CD14-positive, CD16-positive monocyte | 1.69e-18 | 9 |
hematopoietic stem cell | 1.32e-15 | 168 |
hematopoietic cell | 1.07e-14 | 177 |
non-classical monocyte | 1.74e-14 | 3 |
CD14-low, CD16-positive monocyte | 1.74e-14 | 3 |
hematopoietic oligopotent progenitor cell | 2.61e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.61e-14 | 161 |
myeloid leukocyte | 5.63e-13 | 72 |
hematopoietic lineage restricted progenitor cell | 9.45e-13 | 120 |
granulocyte | 2.20e-12 | 8 |
endocrine cell | 2.03e-11 | 9 |
nongranular leukocyte | 2.68e-09 | 115 |
blood cell | 3.73e-09 | 11 |
CD8-positive, alpha-beta T cell | 4.67e-09 | 11 |
myeloid cell | 3.13e-08 | 108 |
common myeloid progenitor | 3.13e-08 | 108 |
myeloid lineage restricted progenitor cell | 5.21e-07 | 66 |
lymphoid lineage restricted progenitor cell | 6.56e-07 | 52 |
granulocyte monocyte progenitor cell | 6.77e-07 | 67 |
lymphocyte | 9.03e-07 | 53 |
common lymphoid progenitor | 9.03e-07 | 53 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.