FFCP PHASE1:Hg19::chr7:106826626..106826630,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=26959|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23200|TSSclassifier=N|UniProt=|association_with_transcript=-278bp_to_ENST00000461963_5end|description=CAGE_peak_3_at_HBP1_5end|id=chr7:106826626..106826630,+|ontology_enrichment_celltype=CL:0000738!6.18e-20!140;CL:0002031!4.95e-18!124;CL:0002087!2.88e-16!119;CL:0000037!2.17e-15!172;CL:0000566!2.17e-15!172;CL:0002032!6.27e-15!165;CL:0000837!6.27e-15!165;CL:0002057!2.39e-14!42;CL:0000988!4.22e-14!182;CL:0000766!6.59e-14!76;CL:0000860!3.44e-13!45;CL:0000839!4.31e-12!70;CL:0000557!2.41e-11!71;CL:0002009!2.44e-10!65;CL:0002194!1.00e-09!63;CL:0000576!1.00e-09!63;CL:0000040!1.00e-09!63;CL:0000559!1.00e-09!63;CL:0000763!2.29e-09!112;CL:0000049!2.29e-09!112|ontology_enrichment_celltype_v019=CL:0000860;3.80e-15;33!CL:0002057;3.80e-15;33!CL:0000766;1.95e-12;69!CL:0000576;5.98e-12;48!CL:0000473;9.10e-12;39!CL:0000234;9.10e-12;39!CL:0000624;1.19e-11;6!CL:0002087;8.39e-11;104!CL:0000791;8.74e-11;18!CL:0000789;8.74e-11;18!CL:0002419;8.74e-11;18!CL:0000094;3.93e-09;8!CL:0000738;6.61e-09;136!CL:0000084;2.47e-08;25!CL:0000081;2.89e-08;11!CL:0000775;1.87e-07;3!CL:0000542;5.51e-07;53!CL:0002393;9.12e-07;6!CL:0002397;9.12e-07;6|ontology_enrichment_celltype_v019_2=CL:0000738,4.61e-36,136;CL:0002031,1.46e-29,120;CL:0002087,5.84e-29,115;CL:0000037,4.52e-28,168;CL:0000988,9.53e-27,177;CL:0002032,2.72e-26,161;CL:0000837,2.72e-26,161;CL:0000766,1.51e-24,72;CL:0000860,1.62e-24,42;CL:0002057,1.62e-24,42;CL:0000473,2.76e-22,48;CL:0000234,2.76e-22,48;CL:0000839,3.17e-20,66;CL:0000557,5.44e-17,67;CL:0002194,3.79e-16,59;CL:0000576,3.79e-16,59;CL:0000040,3.79e-16,59;CL:0000559,3.79e-16,59;CL:0000763,7.06e-16,108;CL:0000049,7.06e-16,108;CL:0002009,2.31e-15,61;CL:0000624,1.81e-11,6;CL:0000791,1.39e-10,18;CL:0000789,1.39e-10,18;CL:0002420,1.39e-10,18;CL:0002419,1.39e-10,18;CL:0000790,1.39e-10,18;CL:0000838,2.19e-10,52;CL:0000542,4.42e-10,53;CL:0000051,4.42e-10,53;CL:0000094,3.87e-09,8;CL:0002393,7.37e-09,9;CL:0002397,7.37e-09,9;CL:0000081,3.46e-08,11;CL:0000084,4.37e-08,25;CL:0000827,4.37e-08,25;CL:0000134,4.77e-08,354;CL:0002320,1.42e-07,361;CL:0000775,1.83e-07,3|ontology_enrichment_development_v019=CL:0002057;6.95e-19;42!CL:0000790;8.74e-11;18!CL:0000051;5.51e-07;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!5.05e-13!102;UBERON:0003061!5.05e-13!102;UBERON:0002193!1.10e-12!112;UBERON:0002371!5.05e-09!80;UBERON:0001474!1.03e-08!86;UBERON:0002405!2.07e-07!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.16e-17,98;UBERON:0003061,1.16e-17,98;UBERON:0002193,5.29e-16,108;UBERON:0002371,5.77e-14,76;UBERON:0001474,2.65e-13,82;UBERON:0002405,1.30e-11,93;UBERON:0004765,2.29e-11,90;UBERON:0001434,2.06e-09,100;UBERON:0002384,2.54e-07,371|phase1_expression=0,0.428201047781966,0.140954404095971,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0,0,0.672325146451775,0,0,0.487932798790507,0.123121058076788,0,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0.164201178899891,0,0.393364276848904,5.37361157336098,1.39334510984468,0,0,0,0.232401601740905,0.568676929949686,0.880801318004542,0,1.60435557976113,1.51907609501096,0.447830948479849,0.971680998056939,0,1.89017710413434,1.88937971844405,0.727752183563449,1.62700325833979,2.05583944010913,0.309706370895104,0.863077176966451,0.768482119587302,0.47296445977717,5.5159308917859,3.22742341791913,1.35426486594342,1.12945403725563,0.818718450173537,0.449446968890169,7.65209730927256,2.88836124368484,1.27867425159808,1.31940520074686,1.39624560335142,0,2.61188314765726,1.70215567407342,0,2.00998932205395,3.65038042894141,0,3.02699751316684,1.84138817993782,0,1.26753171787165,1.70083439972035,1.46761051855863,1.79725809834392,0.901061357049038,0.48217676009124,4.84521664360123,0.99458338599545,1.46131323011707,3.51992488922645,1.09227722252426,0,3.84057200309856,0,0.574752439954483,0,0,3.41527781465669,1.76171156811282,4.58727873750275,1.32171328579026,2.80254281490768,0.263384084775077,3.34406609193516,4.71612915298998,5.75684197198626,0.668745981562712,1.30368906653436,4.73447805734733,1.94826728407911,0.445641827540694,5.59751224202191,1.77227115666897,1.35401931882508,0.512365278902701,0.650296737799391,0.328875809207352,0,0.869409257205157,3.26230438956533,2.67540828089713,0,0.453237370790265,1.14966148080576,0.68725489096526,0.506039384039006,0,1.30216690771284,0,0.451725357233318,0.127986611154418,1.24930726552346,0.236777252044017,0.821127996921047,2.41928091869679,4.01160293675261,3.33096128930438,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0.443458794925128,0,0.654895377488563,0.364295288292542,0,0.324547393654683,0.348259474598534,0.132957960518865,0.715471872916026,0,0,0,0,0,0.56530794192401,0,0,0,0,0.35576626268671,0.66944122552934,0,0,0.488124115096339,0,0,0.625098097988558,0,0.112611480483322,0,0,0,6.58902087180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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=26959 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23200 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-278bp_to_ENST00000461963_5end | |||
|description=CAGE_peak_3_at_HBP1_5end | |||
|id=chr7:106826626..106826630,+ | |||
|ontology_enrichment_celltype=CL:0000738!6.18e-20!140;CL:0002031!4.95e-18!124;CL:0002087!2.88e-16!119;CL:0000037!2.17e-15!172;CL:0000566!2.17e-15!172;CL:0002032!6.27e-15!165;CL:0000837!6.27e-15!165;CL:0002057!2.39e-14!42;CL:0000988!4.22e-14!182;CL:0000766!6.59e-14!76;CL:0000860!3.44e-13!45;CL:0000839!4.31e-12!70;CL:0000557!2.41e-11!71;CL:0002009!2.44e-10!65;CL:0002194!1.00e-09!63;CL:0000576!1.00e-09!63;CL:0000040!1.00e-09!63;CL:0000559!1.00e-09!63;CL:0000763!2.29e-09!112;CL:0000049!2.29e-09!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.80e-15;33!CL:0002057;3.80e-15;33!CL:0000766;1.95e-12;69!CL:0000576;5.98e-12;48!CL:0000473;9.10e-12;39!CL:0000234;9.10e-12;39!CL:0000624;1.19e-11;6!CL:0002087;8.39e-11;104!CL:0000791;8.74e-11;18!CL:0000789;8.74e-11;18!CL:0002419;8.74e-11;18!CL:0000094;3.93e-09;8!CL:0000738;6.61e-09;136!CL:0000084;2.47e-08;25!CL:0000081;2.89e-08;11!CL:0000775;1.87e-07;3!CL:0000542;5.51e-07;53!CL:0002393;9.12e-07;6!CL:0002397;9.12e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.61e-36,136;CL:0002031,1.46e-29,120;CL:0002087,5.84e-29,115;CL:0000037,4.52e-28,168;CL:0000988,9.53e-27,177;CL:0002032,2.72e-26,161;CL:0000837,2.72e-26,161;CL:0000766,1.51e-24,72;CL:0000860,1.62e-24,42;CL:0002057,1.62e-24,42;CL:0000473,2.76e-22,48;CL:0000234,2.76e-22,48;CL:0000839,3.17e-20,66;CL:0000557,5.44e-17,67;CL:0002194,3.79e-16,59;CL:0000576,3.79e-16,59;CL:0000040,3.79e-16,59;CL:0000559,3.79e-16,59;CL:0000763,7.06e-16,108;CL:0000049,7.06e-16,108;CL:0002009,2.31e-15,61;CL:0000624,1.81e-11,6;CL:0000791,1.39e-10,18;CL:0000789,1.39e-10,18;CL:0002420,1.39e-10,18;CL:0002419,1.39e-10,18;CL:0000790,1.39e-10,18;CL:0000838,2.19e-10,52;CL:0000542,4.42e-10,53;CL:0000051,4.42e-10,53;CL:0000094,3.87e-09,8;CL:0002393,7.37e-09,9;CL:0002397,7.37e-09,9;CL:0000081,3.46e-08,11;CL:0000084,4.37e-08,25;CL:0000827,4.37e-08,25;CL:0000134,4.77e-08,354;CL:0002320,1.42e-07,361;CL:0000775,1.83e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;6.95e-19;42!CL:0000790;8.74e-11;18!CL:0000051;5.51e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.05e-13!102;UBERON:0003061!5.05e-13!102;UBERON:0002193!1.10e-12!112;UBERON:0002371!5.05e-09!80;UBERON:0001474!1.03e-08!86;UBERON:0002405!2.07e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.16e-17,98;UBERON:0003061,1.16e-17,98;UBERON:0002193,5.29e-16,108;UBERON:0002371,5.77e-14,76;UBERON:0001474,2.65e-13,82;UBERON:0002405,1.30e-11,93;UBERON:0004765,2.29e-11,90;UBERON:0001434,2.06e-09,100;UBERON:0002384,2.54e-07,371 | |||
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| |||
|short_description=p3@HBP1 | |||
}} |
Revision as of 22:39, 13 September 2013
Short description: | p3@HBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_HBP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -278bp_to_ENST00000461963_5end |
EntrezGene: | HBP1 |
HGNC: | 23200 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.16e-17 | 98 |
blood island | 1.16e-17 | 98 |
hemolymphoid system | 5.29e-16 | 108 |
bone marrow | 5.77e-14 | 76 |
bone element | 2.65e-13 | 82 |
immune system | 1.30e-11 | 93 |
skeletal element | 2.29e-11 | 90 |
skeletal system | 2.06e-09 | 100 |
connective tissue | 2.54e-07 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.