FFCP PHASE1:Hg19::chr7:93519532..93519563,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C378 | |||
|description=CAGE_peak_at_chr7:93519532..93519563,+ | |||
|id=chr7:93519532..93519563,+ | |||
|ontology_enrichment_celltype=CL:0000680!4.14e-29!57;CL:0000056!4.14e-29!57;CL:0000355!4.14e-29!57;CL:0000187!2.42e-27!54;CL:0000192!3.41e-26!42;CL:0000514!3.41e-26!42;CL:0000393!2.08e-25!60;CL:0000211!2.08e-25!60;CL:0000359!3.29e-25!32;CL:0000183!6.68e-25!59;CL:0000222!3.06e-20!119;CL:0000055!7.33e-19!180;CL:0000220!8.28e-13!246;CL:0002321!1.70e-12!248;CL:0002371!1.76e-09!591;CL:0000144!2.40e-09!625;CL:0002494!8.47e-09!16;CL:0002539!1.76e-08!10;CL:0000548!3.28e-08!679;CL:0000004!3.28e-08!679;CL:0000255!3.28e-08!679;CL:0000012!5.89e-08!682;CL:0000723!2.78e-07!436;CL:0002595!2.97e-07!5;CL:0000048!6.68e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.15e-36;32!CL:0000192;1.42e-27;43!CL:0002494;6.95e-15;16!CL:0000187;7.67e-15;55!CL:0002595;2.67e-14;5!CL:0000393;1.56e-12;61!CL:0000211;1.56e-12;61!CL:0002539;1.07e-08;10!CL:0002592;1.09e-08;3!CL:0000048;1.68e-07;58!CL:0000134;1.87e-07;55!CL:0000723;4.67e-07;61!CL:0000569;6.35e-07;4!CL:0002593;7.52e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.97e-37,32;CL:0000192,3.29e-37,43;CL:0000514,3.29e-37,43;CL:0000187,8.97e-30,55;CL:0000680,8.17e-28,58;CL:0000056,8.17e-28,58;CL:0000355,8.17e-28,58;CL:0000393,4.75e-26,61;CL:0000211,4.75e-26,61;CL:0002494,1.07e-14,16;CL:0002595,2.88e-14,5;CL:0000222,4.08e-12,121;CL:0002539,8.97e-09,10;CL:0000048,9.15e-09,427;CL:0002592,1.31e-08,3;CL:0000723,1.92e-08,433;CL:0000034,5.00e-08,441;CL:0000569,7.59e-07,4;CL:0000011,7.59e-07,4;CL:0002593,7.64e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000514;1.42e-27;43!CL:0000355;3.23e-12;58!CL:0000011;6.35e-07;4 | |||
|ontology_enrichment_disease=DOID:2394!1.90e-09!14;DOID:120!1.13e-07!27;DOID:193!8.35e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.66e-17;14!DOID:120;7.66e-10;27!DOID:0060084;4.68e-09;3!DOID:127;4.68e-09;3!DOID:193;5.44e-09;29!DOID:0060072;7.28e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.43e-17,14;DOID:120,7.13e-10,27;DOID:0060084,5.09e-09,3;DOID:127,5.09e-09,3;DOID:193,5.10e-09,29;DOID:0060072,7.74e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001134!4.51e-26!61;UBERON:0002036!4.51e-26!61;UBERON:0003082!4.51e-26!61;UBERON:0004872!1.99e-25!84;UBERON:0001637!2.09e-25!42;UBERON:0003509!2.09e-25!42;UBERON:0004572!2.09e-25!42;UBERON:0004290!2.94e-25!70;UBERON:0002385!1.05e-24!63;UBERON:0001015!1.05e-24!63;UBERON:0000383!1.05e-24!63;UBERON:0001981!4.85e-24!60;UBERON:0007500!4.85e-24!60;UBERON:0004537!4.85e-24!60;UBERON:0006965!4.85e-24!60;UBERON:0000914!6.13e-24!83;UBERON:0002329!6.13e-24!83;UBERON:0003077!6.13e-24!83;UBERON:0003059!6.13e-24!83;UBERON:0007282!6.13e-24!83;UBERON:0009618!6.13e-24!83;UBERON:0007285!6.13e-24!83;UBERON:0000486!2.34e-23!82;UBERON:0004573!6.47e-23!33;UBERON:0004571!6.47e-23!33;UBERON:0002049!4.27e-22!79;UBERON:0007798!4.27e-22!79;UBERON:0000055!9.08e-21!69;UBERON:0000490!6.25e-20!138;UBERON:0004535!2.94e-19!110;UBERON:0001009!4.49e-19!113;UBERON:0003914!1.57e-18!118;UBERON:0005256!1.82e-18!143;UBERON:0000483!2.85e-13!309;UBERON:0000119!3.06e-13!312;UBERON:0002100!8.51e-12!216;UBERON:0000947!3.94e-11!21;UBERON:0010191!3.94e-11!21;UBERON:0003104!2.05e-09!238;UBERON:0009142!2.05e-09!238;UBERON:0000926!4.97e-09!448;UBERON:0004120!4.97e-09!448;UBERON:0006603!4.97e-09!448;UBERON:0001135!5.71e-09!15;UBERON:0000477!1.24e-08!286;UBERON:0004237!1.76e-08!10;UBERON:0004695!1.76e-08!10;UBERON:0002111!1.76e-08!10;UBERON:0004178!1.76e-08!10;UBERON:0000992!5.42e-08!13;UBERON:0000025!7.74e-08!194;UBERON:0000948!7.89e-08!24;UBERON:0005498!7.89e-08!24;UBERON:0004140!7.89e-08!24;UBERON:0009881!7.89e-08!24;UBERON:0004141!7.89e-08!24;UBERON:0003084!7.89e-08!24;UBERON:0007005!7.89e-08!24;UBERON:0004139!7.89e-08!24;UBERON:0004291!7.89e-08!24;UBERON:0004111!9.88e-08!241;UBERON:0003513!1.38e-07!8;UBERON:0007100!2.11e-07!27;UBERON:0003834!2.97e-07!5;UBERON:0001533!2.97e-07!5;UBERON:0000481!3.49e-07!347;UBERON:0003100!3.57e-07!41;UBERON:0005156!5.81e-07!59;UBERON:0000990!5.81e-07!59;UBERON:0003498!8.39e-07!5;UBERON:0005985!8.39e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.29e-19;33!UBERON:0004571;1.29e-19;33!UBERON:0001637;2.48e-18;42!UBERON:0003509;2.48e-18;42!UBERON:0004572;2.48e-18;42!UBERON:0003834;2.67e-14;5!UBERON:0001533;2.67e-14;5!UBERON:0000992;2.24e-12;13!UBERON:0002119;8.89e-12;4!UBERON:0007500;4.87e-11;56!UBERON:0001981;4.87e-11;56!UBERON:0004537;4.87e-11;56!UBERON:0000948;3.25e-10;22!UBERON:0003513;4.52e-10;7!UBERON:0001135;9.22e-10;15!UBERON:0002118;7.65e-09;5!UBERON:0000991;8.74e-09;21!UBERON:0007100;9.95e-09;25!UBERON:0004237;1.07e-08;10!UBERON:0004695;1.07e-08;10!UBERON:0002111;1.07e-08;10!UBERON:0004178;1.07e-08;10!UBERON:0003498;1.09e-08;3!UBERON:0005985;1.09e-08;3!UBERON:0001621;1.09e-08;3!UBERON:0003134;3.36e-08;33!UBERON:0000055;8.72e-08;65!UBERON:0003100;1.22e-07;41!UBERON:0000474;4.56e-07;37!UBERON:0002049;5.43e-07;75!UBERON:0007798;5.43e-07;75!UBERON:0002456;7.52e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,9.89e-27,42;UBERON:0003509,9.89e-27,42;UBERON:0004572,9.89e-27,42;UBERON:0001134,1.69e-25,62;UBERON:0002036,1.69e-25,62;UBERON:0003082,1.69e-25,62;UBERON:0004872,3.34e-25,83;UBERON:0002329,9.88e-25,71;UBERON:0003059,9.88e-25,71;UBERON:0007282,9.88e-25,71;UBERON:0004290,9.88e-25,71;UBERON:0009618,9.88e-25,71;UBERON:0002385,1.88e-24,64;UBERON:0001015,1.88e-24,64;UBERON:0000383,1.88e-24,64;UBERON:0003077,2.86e-24,72;UBERON:0007285,2.86e-24,72;UBERON:0007524,8.03e-24,73;UBERON:0007503,9.39e-22,78;UBERON:0004573,2.80e-21,33;UBERON:0004571,2.80e-21,33;UBERON:0000486,6.11e-20,83;UBERON:0007500,7.71e-19,59;UBERON:0001981,7.71e-19,59;UBERON:0004537,7.71e-19,59;UBERON:0006965,7.71e-19,59;UBERON:0004535,4.99e-17,109;UBERON:0000490,7.73e-17,148;UBERON:0001009,2.47e-16,112;UBERON:0003914,3.09e-16,117;UBERON:0005256,3.48e-16,122;UBERON:0000055,1.77e-15,68;UBERON:0002049,2.04e-15,78;UBERON:0007798,2.04e-15,78;UBERON:0003834,2.88e-14,5;UBERON:0001533,2.88e-14,5;UBERON:0000926,2.22e-13,315;UBERON:0004120,2.22e-13,315;UBERON:0006603,2.22e-13,315;UBERON:0000948,2.81e-13,24;UBERON:0005498,2.81e-13,24;UBERON:0004140,2.81e-13,24;UBERON:0009881,2.81e-13,24;UBERON:0004141,2.81e-13,24;UBERON:0003084,2.81e-13,24;UBERON:0007005,2.81e-13,24;UBERON:0004139,2.81e-13,24;UBERON:0004291,2.81e-13,24;UBERON:0003498,2.89e-13,5;UBERON:0005985,2.89e-13,5;UBERON:0003104,5.51e-13,160;UBERON:0009142,5.51e-13,160;UBERON:0000992,1.63e-12,13;UBERON:0002119,7.40e-12,4;UBERON:0007100,1.75e-11,27;UBERON:0003513,4.75e-10,7;UBERON:0002100,6.91e-10,199;UBERON:0001135,7.24e-10,15;UBERON:0003100,1.33e-09,41;UBERON:0003134,1.65e-09,37;UBERON:0000474,1.65e-09,37;UBERON:0002118,5.77e-09,5;UBERON:0000991,6.75e-09,21;UBERON:0009196,6.75e-09,21;UBERON:0009117,6.75e-09,21;UBERON:0005564,6.75e-09,21;UBERON:0004237,8.97e-09,10;UBERON:0004695,8.97e-09,10;UBERON:0002111,8.97e-09,10;UBERON:0004178,8.97e-09,10;UBERON:0001621,1.31e-08,3;UBERON:0004176,2.08e-08,22;UBERON:0000025,8.43e-08,192;UBERON:0003133,9.78e-08,48;UBERON:0005156,1.14e-07,59;UBERON:0000990,1.14e-07,59;UBERON:0003081,4.53e-07,203;UBERON:0000483,5.07e-07,306;UBERON:0000119,7.51e-07,309;UBERON:0002456,7.64e-07,2 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0.872338524100369,0,1.26343974685366,0,0.491467873003018,0,0,0,0.618831764800233,0.994192127183747,2.01697543935533,1.80808358407193,1.46062018077475,2.92759679274304,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,1.83884244895785,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35350429851818,0.511450247374121,0,0,0.289693037921647,0,1.94653948121054,0,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0.56530794192401,0,0,0,0,0,0,0.402829317109147,1.52054421143703,0,1.10298924103761,0,0.0892997282840798,0,0.225222960966644,0,0,0.549605231791222,0,0,0,0,0.379891534993739,0.529636723252875,0.573673241497627,0.709336764396714,1.12135520028461,0,0.24666754841716,0,2.2900814251847,6.70193802765181,0.151357427644931,0,0,1.5608003841516,0,1.34503812496621,0.117434498643765,0,0.140450806702248,0,0,0.103325781175765,0,0.989067717114227,0,0,0,0.125118519871964,0,0,0.30648779579902,1.80285670687916,3.85669422744072,0,0,0,0.300091096084402,0.103052529238439,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,0.57978255948989,0,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0.301586917234893,0.0925884451585296,0,0,0,0,0.469634776943287,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0.895585227028483,1.45316969256981,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,1.68053230485111,0,2.535908257668,0.531876233169741,0,0,0,0,1.42977993658148,0,0,0.325736184293735,1.06617584622764,9.50342247520115,0.602878754119172,0,0.099972991182057,0,0,0,0,0,0,0.723906533337896,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,1.48418066444991,0.616838775210622,1.24293207719189,0.164254312027618,0.519254429183621,0.348631135379878,0,0,0.0920809889358963,0.229628896329213,1.63882051206045,0.131124414959424,0,0.15403067420883,0,0,0.633309773357254,0,0,0.431831832204279,0,0.270946437543853,0,0,0.831076008928724,0.223874754722178,0,0,0,0.328014645699706,0,2.06082023295445,0,0,0,0,1.6068392984416,0.096670718292122,0.462145851343933,0.15350367472613,0.137836572484531,0.107420244868274,0,0.426133137080504,0,0.330569830721956,0.192190067365106,0.382838137483752,0.2023155617111,0,0.62962469366128,0.6970372701606,4.31247012246524,0.532306030317022,5.21959795245044,2.59453906745488,1.71749864090389,0,2.21465597303108,3.24071329670502,0,0,0.95460974377781,3.92474320099615,0.179872457583315,3.56898138656871,2.70968525395079,1.41527737101321,3.17020642346017,27.3817996555338,0,27.2959108387039,5.28250733783777,0.545999645631943,2.54529777516683,2.26016233240486,2.2054613741845,11.2784625791007,7.89211593456773,0,0,1.21746226177622,1.54911749049875,3.66204283291914,0,0.0982490410131212,0.35667105148125,1.77380532035299,0.844430541190656,0.329294892959902,0,0,0,0,1.08890984861323,1.7887322147588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0,4.11842208584752,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,7.1822435590025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661983911750998,0.313932918407225,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0.794858446811959,0,0,0.160317640503067,0,0,0,0,0,0.288109595976299,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0.429226048136571,0,0,2.16179930125442,0,0,0,0,0,0,0,0,0,0.137539436597234,0.415440338029185,0,0,0,0,0.0788057072991982,0,0,2.15144807199414,0,0,0,0,2.17199840701485,6.91377192961014,9.14444608306346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,1.19403842309499,0.233713309847224,2.21922344601045,0,0.251567901752575,1.77962244319307,2.05956061557231,0,7.1501112268079,15.2290804489323,10.6728833999681,2.69881867298163,7.91841080068923,17.4176607293159,3.19010057469594,0,1.20206087197775,0,4.06870733204662,2.72772988803839,4.08160116761456,2.78420255927096,0,0,0.343395705182793,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,1.47463745252232,0,0,0,0,0,2.02516545277025,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0.0752103283492573,0.20170506870352,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0.894336993477167,0.535701835878287,0,0,0,6.74138013236055,0,0,0,0,0,0.222462803784138,0,0,0,0,5.39818978046554,0,0.285906176706625,0,0.23248285073625,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0.68732060563215,0.62041277132864,0.955538938977433,0.894843454382338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.359416917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| |||
|short_description=p@chr7:93519532..93519563,+ | |||
}} |
Revision as of 02:28, 14 September 2013
Short description: | p@chr7:93519532..93519563, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:93519532..93519563, + |
Coexpression cluster: | C378_Smooth_mesenchymal_placenta_clear_leiomyoma_renal_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.97e-37 | 32 |
smooth muscle cell | 3.29e-37 | 43 |
smooth muscle myoblast | 3.29e-37 | 43 |
muscle cell | 8.97e-30 | 55 |
muscle precursor cell | 8.17e-28 | 58 |
myoblast | 8.17e-28 | 58 |
multi-potent skeletal muscle stem cell | 8.17e-28 | 58 |
electrically responsive cell | 4.75e-26 | 61 |
electrically active cell | 4.75e-26 | 61 |
cardiocyte | 1.07e-14 | 16 |
smooth muscle cell of the subclavian artery | 2.88e-14 | 5 |
mesodermal cell | 4.08e-12 | 121 |
aortic smooth muscle cell | 8.97e-09 | 10 |
multi fate stem cell | 9.15e-09 | 427 |
smooth muscle cell of the coronary artery | 1.31e-08 | 3 |
somatic stem cell | 1.92e-08 | 433 |
stem cell | 5.00e-08 | 441 |
cardiac mesenchymal cell | 7.59e-07 | 4 |
migratory trunk neural crest cell | 7.59e-07 | 4 |
smooth muscle cell of the internal thoracic artery | 7.64e-07 | 2 |
Ontology term | p-value | n |
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