FFCP PHASE1:Hg19::chr7:80374402..80374418,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10512|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=10725|TSSclassifier=S|UniProt=|association_with_transcript=-44bp_to_AF086506_5end|coexpression_cluster_id=C1283|description=CAGE_peak_13_at_SEMA3C_5end|id=chr7:80374402..80374418,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000214;1.79e-10;3!CL:0000135;4.26e-10;3!CL:0000388;4.26e-10;3!CL:0002616;5.39e-08;1!CL:1000306;1.39e-07;4!CL:0002547;1.39e-07;4!CL:0000153;1.68e-07;9!CL:0000447;1.68e-07;9|ontology_enrichment_celltype_v019_2=CL:0000214,1.84e-10,3;CL:0000135,2.65e-10,3;CL:0000388,2.65e-10,3;CL:0002616,3.34e-08,1;CL:0000153,1.56e-07,9;CL:0000447,1.56e-07,9;CL:1000306,2.36e-07,4;CL:0002547,2.36e-07,4|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0006915;1.79e-10;3!UBERON:0007616;1.79e-10;3!UBERON:0002217;1.79e-10;3!UBERON:0002018;1.79e-10;3!UBERON:0007846;4.26e-10;3!UBERON:0000043;4.26e-10;3!UBERON:0007845;4.26e-10;3!UBERON:0004797;1.39e-07;4!UBERON:0000415;1.39e-07;4!UBERON:0007240;1.39e-07;4!UBERON:0005742;1.39e-07;4!UBERON:0005734;1.39e-07;4!UBERON:0004664;1.39e-07;4!UBERON:0004663;1.39e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0006915,1.84e-10,3;UBERON:0007616,1.84e-10,3;UBERON:0002217,1.84e-10,3;UBERON:0002018,1.84e-10,3;UBERON:0007846,2.65e-10,3;UBERON:0000043,2.65e-10,3;UBERON:0007845,2.65e-10,3;UBERON:0000415,2.36e-07,4;UBERON:0007240,2.36e-07,4;UBERON:0005742,2.36e-07,4;UBERON:0005734,2.36e-07,4;UBERON:0004664,2.36e-07,4;UBERON:0004663,2.36e-07,4|phase1_expression=0.181678379270557,1.92690471501885,0.422863212287913,0,0,1.74467704820074,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0.331397375727916,0.672325146451775,0.602694528023977,0,0.487932798790507,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0.919421224478927,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,1.44846518960824,0.795285947051099,0.486634870302636,0.189069634328136,0.443458794925128,0.43917392846563,0,0,0,0,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0.132409180813219,1.14734648299525,1.06400514659507,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0.717558542755448,0,0.211931901159562,0,0.103052529238439,0.772921620136887,0.18611685633159,0.168776332241266,0.389748020644795,0.252433774244115,0,0,1.06502877754984,0.10075209822764,0,0,0.818238361772504,0,0,0,0,0.10366105501537,0,0,0,1.92972281457866,0,0,0,0,0,0.241011029883482,0,0.217879444092406,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0.301586917234893,0.277765335475589,0,0,0,0.115930404975077,0.352226082707465,0,0,0,1.58040879591855,0.858486162094873,0,0,0,0,0.671928512795438,0.850650583454319,0.0895585227028483,0.871901815541886,0,0,0,0,0,0,0.253991577168676,0,0,0,0,0,0,0,0,0.07333828582095,0.387815147273333,0,0,0,1.04007436911366,0,1.41849132023278,0,0,0,0,0,0,0,0.301439377059586,0,0.699810938274399,0,0,2.10833939483032,0,0,0,0.434343920002738,0.61642896765115,0,0,0,0,0,0,1.30139853857622,0,0.837581326671744,3.82763250991898,0,0,0,0,0,0,0.415941723061614,0.356857977594324,0.315404830067869,0.234282829985426,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0.561320188866147,0.512556597022804,0,0.965123526861645,0,0.154209693802656,0.177561725313127,0,0,0.581051892299796,0.120859449591622,1.20303882181971,0.460404944679482,0,0.546273504020151,0,0,0,0,1.46139224653261,0.316654886678627,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0,0.661139661443912,0.192190067365106,0.510450849978337,0.6069466851333,0.464845549297286,0.94443704049192,0,0,0,0,0,0.715624433709956,0,0,0,0,1.28381696410176,0,0.78494864019923,0,0,0.117812402345686,0,0,0,0,0.974853958525138,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0.709522128141196,3.58882980006029,11.8546161465565,0,0,0,0,0,0,0.86101074534246,0,0,1.83778720165568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.153900517007594,0.341826167541004,0,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0.158936578980379,0.843992258112108,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0.234264445725339,0,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10512 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=10725 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-44bp_to_AF086506_5end | |||
|coexpression_cluster_id=C1283 | |||
|description=CAGE_peak_13_at_SEMA3C_5end | |||
|id=chr7:80374402..80374418,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000214;1.79e-10;3!CL:0000135;4.26e-10;3!CL:0000388;4.26e-10;3!CL:0002616;5.39e-08;1!CL:1000306;1.39e-07;4!CL:0002547;1.39e-07;4!CL:0000153;1.68e-07;9!CL:0000447;1.68e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,1.84e-10,3;CL:0000135,2.65e-10,3;CL:0000388,2.65e-10,3;CL:0002616,3.34e-08,1;CL:0000153,1.56e-07,9;CL:0000447,1.56e-07,9;CL:1000306,2.36e-07,4;CL:0002547,2.36e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;1.79e-10;3!UBERON:0007616;1.79e-10;3!UBERON:0002217;1.79e-10;3!UBERON:0002018;1.79e-10;3!UBERON:0007846;4.26e-10;3!UBERON:0000043;4.26e-10;3!UBERON:0007845;4.26e-10;3!UBERON:0004797;1.39e-07;4!UBERON:0000415;1.39e-07;4!UBERON:0007240;1.39e-07;4!UBERON:0005742;1.39e-07;4!UBERON:0005734;1.39e-07;4!UBERON:0004664;1.39e-07;4!UBERON:0004663;1.39e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,1.84e-10,3;UBERON:0007616,1.84e-10,3;UBERON:0002217,1.84e-10,3;UBERON:0002018,1.84e-10,3;UBERON:0007846,2.65e-10,3;UBERON:0000043,2.65e-10,3;UBERON:0007845,2.65e-10,3;UBERON:0000415,2.36e-07,4;UBERON:0007240,2.36e-07,4;UBERON:0005742,2.36e-07,4;UBERON:0005734,2.36e-07,4;UBERON:0004664,2.36e-07,4;UBERON:0004663,2.36e-07,4 | |||
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| |||
|short_description=p13@SEMA3C | |||
}} |
Revision as of 02:09, 14 September 2013
Short description: | p13@SEMA3C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_SEMA3C_5end |
Coexpression cluster: | C1283_Synoviocyte_tenocyte_Fibroblast_Adipocyte_Ewing_Chondrocyte_Neurons |
Association with transcript: | -44bp_to_AF086506_5end |
EntrezGene: | SEMA3C |
HGNC: | 10725 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 1.84e-10 | 3 |
fibrocyte | 2.65e-10 | 3 |
tendon cell | 2.65e-10 | 3 |
perirenal adipocyte cell | 3.34e-08 | 1 |
GAG secreting cell | 1.56e-07 | 9 |
carbohydrate secreting cell | 1.56e-07 | 9 |
fibroblast of tunica adventitia of artery | 2.36e-07 | 4 |
fibroblast of the aortic adventitia | 2.36e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 1.84e-10 | 3 |
layer of synovial tissue | 1.84e-10 | 3 |
synovial joint | 1.84e-10 | 3 |
synovial membrane of synovial joint | 1.84e-10 | 3 |
dense regular connective tissue | 2.65e-10 | 3 |
tendon | 2.65e-10 | 3 |
regular connective tissue | 2.65e-10 | 3 |
artery wall | 2.36e-07 | 4 |
tunica adventitia of artery | 2.36e-07 | 4 |
adventitia | 2.36e-07 | 4 |
tunica adventitia of blood vessel | 2.36e-07 | 4 |
aorta tunica adventitia | 2.36e-07 | 4 |
aorta wall | 2.36e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.