FFCP PHASE1:Hg19::chr7:36320733..36320746,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=80820|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=22223|TSSclassifier=S|UniProt=|association_with_transcript=41bp_to_ENST00000487069_5end|coexpression_cluster_id=C4686|description=CAGE_peak_9_at_EEPD1_5end|id=chr7:36320733..36320746,+|ontology_enrichment_celltype=CL:0002194!8.28e-24!63;CL:0000576!8.28e-24!63;CL:0000040!8.28e-24!63;CL:0000559!8.28e-24!63;CL:0002009!1.05e-22!65;CL:0002057!6.78e-22!42;CL:0000766!1.25e-21!76;CL:0000860!3.08e-21!45;CL:0000839!3.10e-20!70;CL:0000557!8.77e-20!71;CL:0000763!1.12e-15!112;CL:0000049!1.12e-15!112;CL:0002087!1.95e-09!119;CL:0000738!8.44e-09!140;CL:0002031!1.25e-08!124;CL:0002032!2.86e-08!165;CL:0000837!2.86e-08!165;CL:0000988!5.51e-08!182;CL:0000037!1.91e-07!172;CL:0000566!1.91e-07!172|ontology_enrichment_celltype_v019=CL:0000473;1.23e-54;39!CL:0000234;1.23e-54;39!CL:0000860;2.37e-38;33!CL:0002057;2.37e-38;33!CL:0000235;4.20e-30;6!CL:0000766;3.83e-22;69!CL:0000576;7.08e-21;48!CL:0000840;4.74e-11;5!CL:0000990;1.57e-07;8|ontology_enrichment_celltype_v019_2=CL:0002194,5.18e-59,59;CL:0000576,5.18e-59,59;CL:0000040,5.18e-59,59;CL:0000559,5.18e-59,59;CL:0002009,5.56e-57,61;CL:0000473,3.43e-56,48;CL:0000234,3.43e-56,48;CL:0000839,1.96e-52,66;CL:0000557,1.33e-51,67;CL:0000766,8.50e-48,72;CL:0000860,1.26e-35,42;CL:0002057,1.26e-35,42;CL:0000763,1.12e-30,108;CL:0000049,1.12e-30,108;CL:0000235,4.48e-30,6;CL:0002087,1.40e-28,115;CL:0002031,3.14e-27,120;CL:0000738,1.44e-23,136;CL:0002032,2.74e-19,161;CL:0000837,2.74e-19,161;CL:0000037,2.57e-18,168;CL:0000988,3.53e-17,177;CL:0000840,5.00e-11,5;CL:0001029,5.00e-11,5;CL:0000990,1.63e-07,8;CL:0000134,2.58e-07,354;CL:0002320,4.36e-07,361|ontology_enrichment_development_v019=CL:0002057;4.03e-30;42!CL:0000049;3.88e-11;108!UBERON:0005425;1.18e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.59e-18!80;UBERON:0001474!2.17e-16!86;UBERON:0002390!7.56e-16!102;UBERON:0003061!7.56e-16!102;UBERON:0002193!2.70e-13!112;UBERON:0004765!4.89e-13!101;UBERON:0001434!4.89e-13!101;UBERON:0002405!2.02e-09!115;UBERON:0007023!1.27e-07!115|ontology_enrichment_uberon_v019=UBERON:0000941;1.18e-08;1!UBERON:0001785;1.18e-08;1!UBERON:0002464;1.18e-08;1!UBERON:0004904;1.18e-08;1!UBERON:0001021;1.18e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.17e-45,76;UBERON:0001474,1.48e-41,82;UBERON:0004765,1.51e-37,90;UBERON:0002405,3.20e-36,93;UBERON:0002390,3.46e-34,98;UBERON:0003061,3.46e-34,98;UBERON:0001434,1.98e-33,100;UBERON:0002193,1.12e-30,108;UBERON:0002204,1.89e-18,167;UBERON:0003081,1.88e-14,203;UBERON:0000941,9.46e-09,1;UBERON:0001785,9.46e-09,1;UBERON:0002464,9.46e-09,1;UBERON:0004904,9.46e-09,1;UBERON:0001021,9.46e-09,1;UBERON:0003902,9.46e-09,1;UBERON:0005425,9.46e-09,1;UBERON:0000926,8.24e-08,315;UBERON:0004120,8.24e-08,315;UBERON:0006603,8.24e-08,315;UBERON:0002384,8.94e-07,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,0.464448369948228,0,0,0,0,0,0,1.10799081706375,0.802177789880567,0.651032612147555,0,0,0,0.726991193897824,3.77875943688809,1.69808842831471,0.929716147622738,3.70051099219643,3.40677007984614,0.863077176966451,2.56160706529101,0.945928919554341,1.37898272294647,1.29096936716765,0,1.12945403725563,3.27487380069415,2.02251136000576,0.612167784741805,0.641858054152187,0,0.659702600373432,2.19410023383795,0.852449501065388,0.290209238628584,0,0,1.7587406567972,4.17186334736161,2.6062661364614,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,1.29818957461873,1.56716763569341,1.19662164466979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96973604869918,7.48813648445561,2.37809859661965,0,0,0,0,0,0,0,0,0,0,0,0.380987365753014,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,3.64871341923571,1.00451418286425,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,1.32845119707087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0.211673582723883,0,0,0,0.156679895773023,0,0,0,0.201799707191048,0,0,0,0,0,0.390776190804081,0.278406173895242,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=80820 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22223 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=41bp_to_ENST00000487069_5end | |||
|coexpression_cluster_id=C4686 | |||
|description=CAGE_peak_9_at_EEPD1_5end | |||
|id=chr7:36320733..36320746,+ | |||
|ontology_enrichment_celltype=CL:0002194!8.28e-24!63;CL:0000576!8.28e-24!63;CL:0000040!8.28e-24!63;CL:0000559!8.28e-24!63;CL:0002009!1.05e-22!65;CL:0002057!6.78e-22!42;CL:0000766!1.25e-21!76;CL:0000860!3.08e-21!45;CL:0000839!3.10e-20!70;CL:0000557!8.77e-20!71;CL:0000763!1.12e-15!112;CL:0000049!1.12e-15!112;CL:0002087!1.95e-09!119;CL:0000738!8.44e-09!140;CL:0002031!1.25e-08!124;CL:0002032!2.86e-08!165;CL:0000837!2.86e-08!165;CL:0000988!5.51e-08!182;CL:0000037!1.91e-07!172;CL:0000566!1.91e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.23e-54;39!CL:0000234;1.23e-54;39!CL:0000860;2.37e-38;33!CL:0002057;2.37e-38;33!CL:0000235;4.20e-30;6!CL:0000766;3.83e-22;69!CL:0000576;7.08e-21;48!CL:0000840;4.74e-11;5!CL:0000990;1.57e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,5.18e-59,59;CL:0000576,5.18e-59,59;CL:0000040,5.18e-59,59;CL:0000559,5.18e-59,59;CL:0002009,5.56e-57,61;CL:0000473,3.43e-56,48;CL:0000234,3.43e-56,48;CL:0000839,1.96e-52,66;CL:0000557,1.33e-51,67;CL:0000766,8.50e-48,72;CL:0000860,1.26e-35,42;CL:0002057,1.26e-35,42;CL:0000763,1.12e-30,108;CL:0000049,1.12e-30,108;CL:0000235,4.48e-30,6;CL:0002087,1.40e-28,115;CL:0002031,3.14e-27,120;CL:0000738,1.44e-23,136;CL:0002032,2.74e-19,161;CL:0000837,2.74e-19,161;CL:0000037,2.57e-18,168;CL:0000988,3.53e-17,177;CL:0000840,5.00e-11,5;CL:0001029,5.00e-11,5;CL:0000990,1.63e-07,8;CL:0000134,2.58e-07,354;CL:0002320,4.36e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;4.03e-30;42!CL:0000049;3.88e-11;108!UBERON:0005425;1.18e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.59e-18!80;UBERON:0001474!2.17e-16!86;UBERON:0002390!7.56e-16!102;UBERON:0003061!7.56e-16!102;UBERON:0002193!2.70e-13!112;UBERON:0004765!4.89e-13!101;UBERON:0001434!4.89e-13!101;UBERON:0002405!2.02e-09!115;UBERON:0007023!1.27e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.18e-08;1!UBERON:0001785;1.18e-08;1!UBERON:0002464;1.18e-08;1!UBERON:0004904;1.18e-08;1!UBERON:0001021;1.18e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.17e-45,76;UBERON:0001474,1.48e-41,82;UBERON:0004765,1.51e-37,90;UBERON:0002405,3.20e-36,93;UBERON:0002390,3.46e-34,98;UBERON:0003061,3.46e-34,98;UBERON:0001434,1.98e-33,100;UBERON:0002193,1.12e-30,108;UBERON:0002204,1.89e-18,167;UBERON:0003081,1.88e-14,203;UBERON:0000941,9.46e-09,1;UBERON:0001785,9.46e-09,1;UBERON:0002464,9.46e-09,1;UBERON:0004904,9.46e-09,1;UBERON:0001021,9.46e-09,1;UBERON:0003902,9.46e-09,1;UBERON:0005425,9.46e-09,1;UBERON:0000926,8.24e-08,315;UBERON:0004120,8.24e-08,315;UBERON:0006603,8.24e-08,315;UBERON:0002384,8.94e-07,371 | |||
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|short_description=p9@EEPD1 | |||
}} |
Revision as of 01:03, 14 September 2013
Short description: | p9@EEPD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_EEPD1_5end |
Coexpression cluster: | C4686_Monocytederived_CD14_Macrophage_smallcell_squamous_Basophils_signet |
Association with transcript: | 41bp_to_ENST00000487069_5end |
EntrezGene: | EEPD1 |
HGNC: | 22223 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 5.18e-59 | 59 |
monocyte | 5.18e-59 | 59 |
monoblast | 5.18e-59 | 59 |
promonocyte | 5.18e-59 | 59 |
macrophage dendritic cell progenitor | 5.56e-57 | 61 |
defensive cell | 3.43e-56 | 48 |
phagocyte | 3.43e-56 | 48 |
myeloid lineage restricted progenitor cell | 1.96e-52 | 66 |
granulocyte monocyte progenitor cell | 1.33e-51 | 67 |
myeloid leukocyte | 8.50e-48 | 72 |
classical monocyte | 1.26e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.26e-35 | 42 |
myeloid cell | 1.12e-30 | 108 |
common myeloid progenitor | 1.12e-30 | 108 |
macrophage | 4.48e-30 | 6 |
nongranular leukocyte | 1.40e-28 | 115 |
hematopoietic lineage restricted progenitor cell | 3.14e-27 | 120 |
leukocyte | 1.44e-23 | 136 |
hematopoietic oligopotent progenitor cell | 2.74e-19 | 161 |
hematopoietic multipotent progenitor cell | 2.74e-19 | 161 |
hematopoietic stem cell | 2.57e-18 | 168 |
hematopoietic cell | 3.53e-17 | 177 |
immature conventional dendritic cell | 5.00e-11 | 5 |
common dendritic progenitor | 5.00e-11 | 5 |
conventional dendritic cell | 1.63e-07 | 8 |
mesenchymal cell | 2.58e-07 | 354 |
connective tissue cell | 4.36e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.17e-45 | 76 |
bone element | 1.48e-41 | 82 |
skeletal element | 1.51e-37 | 90 |
immune system | 3.20e-36 | 93 |
hematopoietic system | 3.46e-34 | 98 |
blood island | 3.46e-34 | 98 |
skeletal system | 1.98e-33 | 100 |
hemolymphoid system | 1.12e-30 | 108 |
musculoskeletal system | 1.89e-18 | 167 |
lateral plate mesoderm | 1.88e-14 | 203 |
cranial nerve II | 9.46e-09 | 1 |
cranial nerve | 9.46e-09 | 1 |
nerve trunk | 9.46e-09 | 1 |
nerve connecting eye with brain | 9.46e-09 | 1 |
nerve | 9.46e-09 | 1 |
retinal neural layer | 9.46e-09 | 1 |
presumptive neural retina | 9.46e-09 | 1 |
mesoderm | 8.24e-08 | 315 |
mesoderm-derived structure | 8.24e-08 | 315 |
presumptive mesoderm | 8.24e-08 | 315 |
connective tissue | 8.94e-07 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.