FFCP PHASE1:Hg19::chr6:152126830..152126847,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2099|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3467|TSSclassifier=S|UniProt=E7EVR3,P03372|association_with_transcript=22bp_to_ENST00000431219,ENST00000456483,NM_001122741,uc010kin.2,uc010kio.2,uc010kip.2_5end|coexpression_cluster_id=C233|description=CAGE_peak_4_at_ESR1_5end|id=chr6:152126830..152126847,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002149;4.94e-13;6!CL:0002255;4.94e-13;6|ontology_enrichment_celltype_v019_2=CL:0002149,3.84e-13,6;CL:0002255,3.84e-13,6|ontology_enrichment_development_v019=UBERON:0005795;3.10e-30;10!UBERON:0006603;2.23e-18;65!UBERON:0007297;3.41e-11;2|ontology_enrichment_disease=DOID:0060084!3.46e-07!3;DOID:127!3.46e-07!3|ontology_enrichment_disease_v019=DOID:3001;4.94e-13;6!DOID:0060084;2.34e-07;3!DOID:127;2.34e-07;3|ontology_enrichment_disease_v019_2=DOID:3001,3.84e-13,6;DOID:0060084,2.19e-07,3;DOID:127,2.19e-07,3|ontology_enrichment_uberon=UBERON:0007023!9.40e-31!115;UBERON:0004175!2.24e-16!25;UBERON:0003133!2.77e-14!48;UBERON:0005156!7.38e-13!59;UBERON:0000990!7.38e-13!59;UBERON:0005795!6.05e-12!22;UBERON:0003975!6.78e-12!22;UBERON:0000995!1.90e-10!21;UBERON:0003134!1.50e-09!37;UBERON:0000474!1.50e-09!37;UBERON:0003100!3.11e-08!41;UBERON:0006947!2.28e-07!3;UBERON:0004054!2.28e-07!3|ontology_enrichment_uberon_v019=UBERON:0004175;1.78e-31;21!UBERON:0003975;1.55e-25;18!UBERON:0000995;6.26e-22;17!UBERON:0003133;2.82e-15;44!UBERON:0003134;1.10e-14;33!UBERON:0000474;1.85e-12;37!UBERON:0000007;3.77e-11;2!UBERON:0005090;1.20e-10;2!UBERON:0001630;1.20e-10;2!UBERON:0005156;3.14e-10;59!UBERON:0000990;3.14e-10;59!UBERON:0003100;4.65e-09;41!UBERON:0006947;9.88e-08;3!UBERON:0004054;9.88e-08;3!UBERON:0003135;2.11e-07;11!UBERON:0001723;2.61e-07;3!UBERON:0001033;2.61e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0004175,4.04e-26,25;UBERON:0005795,9.87e-21,22;UBERON:0003975,1.25e-20,22;UBERON:0003133,6.47e-20,48;UBERON:0007023,7.42e-19,114;UBERON:0005156,8.97e-18,59;UBERON:0000990,8.97e-18,59;UBERON:0000995,1.56e-17,21;UBERON:0003134,4.94e-14,37;UBERON:0000474,4.94e-14,37;UBERON:0003100,1.90e-12,41;UBERON:0000007,3.87e-11,2;UBERON:0005090,1.53e-10,2;UBERON:0001630,1.53e-10,2;UBERON:0006947,1.00e-07,3;UBERON:0004054,1.00e-07,3;UBERON:0003135,1.92e-07,11;UBERON:0001723,2.83e-07,3;UBERON:0001033,2.83e-07,3;UBERON:0010056,2.83e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,9.56147251133302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,6.86788929675898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,3.27995961979597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0,0,0,0,1.96937182974718,0,0,0,2.39097585901284,0.276283915531148,0,0,0,0,0,0,0,1.38100767891707,0,0,0,0,0,0,0,7.24999575434793,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,6.55291598109435,62.3297093880756,0,0,0,0,0.638002319463839,1.09917112082235,0,0,0,0,0,0,0,0,0,0,1.46909527343233,0,0,0,0,0,0,0,0,0,6.42062117839031,0,0,0,0,0.789168805698781,0,0,0.442306057399416,0,0,0,0,0,0,0,0,3.81831424337288,0,0,14.8517668005726,0,0,0,0,0.0969890164884194,0.0882561266915003,0,0,0,0.126621591911757,1.17330829640882,0.160317640503067,0.640358984218058,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,1.39641200636127,0.687481272035051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0.335434687599266,0.0788057072991982,0,0,0,0,1.42939065274673,0,0,2.71499800876856,0.864221491201268,2.93928624098468,0,0,0,0,0,0,0,0,0,0,0.640724475406168,0.157204305099666,1.65695622138878,0,0,0,0,0.544017803369474,0.2506898940227,0.306345576763462,0,0,0,0.244052529803926,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0.829412415681711,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.00371548107998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0.183428598521679,0.115525666150338,0,0,0.19891622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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2099 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3467 | |||
|TSSclassifier=S | |||
|UniProt=E7EVR3,P03372 | |||
|association_with_transcript=22bp_to_ENST00000431219,ENST00000456483,NM_001122741,uc010kin.2,uc010kio.2,uc010kip.2_5end | |||
|coexpression_cluster_id=C233 | |||
|description=CAGE_peak_4_at_ESR1_5end | |||
|id=chr6:152126830..152126847,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002149;4.94e-13;6!CL:0002255;4.94e-13;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,3.84e-13,6;CL:0002255,3.84e-13,6 | |||
|ontology_enrichment_development_v019=UBERON:0005795;3.10e-30;10!UBERON:0006603;2.23e-18;65!UBERON:0007297;3.41e-11;2 | |||
|ontology_enrichment_disease=DOID:0060084!3.46e-07!3;DOID:127!3.46e-07!3 | |||
|ontology_enrichment_disease_v019=DOID:3001;4.94e-13;6!DOID:0060084;2.34e-07;3!DOID:127;2.34e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,3.84e-13,6;DOID:0060084,2.19e-07,3;DOID:127,2.19e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.40e-31!115;UBERON:0004175!2.24e-16!25;UBERON:0003133!2.77e-14!48;UBERON:0005156!7.38e-13!59;UBERON:0000990!7.38e-13!59;UBERON:0005795!6.05e-12!22;UBERON:0003975!6.78e-12!22;UBERON:0000995!1.90e-10!21;UBERON:0003134!1.50e-09!37;UBERON:0000474!1.50e-09!37;UBERON:0003100!3.11e-08!41;UBERON:0006947!2.28e-07!3;UBERON:0004054!2.28e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004175;1.78e-31;21!UBERON:0003975;1.55e-25;18!UBERON:0000995;6.26e-22;17!UBERON:0003133;2.82e-15;44!UBERON:0003134;1.10e-14;33!UBERON:0000474;1.85e-12;37!UBERON:0000007;3.77e-11;2!UBERON:0005090;1.20e-10;2!UBERON:0001630;1.20e-10;2!UBERON:0005156;3.14e-10;59!UBERON:0000990;3.14e-10;59!UBERON:0003100;4.65e-09;41!UBERON:0006947;9.88e-08;3!UBERON:0004054;9.88e-08;3!UBERON:0003135;2.11e-07;11!UBERON:0001723;2.61e-07;3!UBERON:0001033;2.61e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004175,4.04e-26,25;UBERON:0005795,9.87e-21,22;UBERON:0003975,1.25e-20,22;UBERON:0003133,6.47e-20,48;UBERON:0007023,7.42e-19,114;UBERON:0005156,8.97e-18,59;UBERON:0000990,8.97e-18,59;UBERON:0000995,1.56e-17,21;UBERON:0003134,4.94e-14,37;UBERON:0000474,4.94e-14,37;UBERON:0003100,1.90e-12,41;UBERON:0000007,3.87e-11,2;UBERON:0005090,1.53e-10,2;UBERON:0001630,1.53e-10,2;UBERON:0006947,1.00e-07,3;UBERON:0004054,1.00e-07,3;UBERON:0003135,1.92e-07,11;UBERON:0001723,2.83e-07,3;UBERON:0001033,2.83e-07,3;UBERON:0010056,2.83e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,9.56147251133302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,6.86788929675898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,3.27995961979597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0,0,0,0,1.96937182974718,0,0,0,2.39097585901284,0.276283915531148,0,0,0,0,0,0,0,1.38100767891707,0,0,0,0,0,0,0,7.24999575434793,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,6.55291598109435,62.3297093880756,0,0,0,0,0.638002319463839,1.09917112082235,0,0,0,0,0,0,0,0,0,0,1.46909527343233,0,0,0,0,0,0,0,0,0,6.42062117839031,0,0,0,0,0.789168805698781,0,0,0.442306057399416,0,0,0,0,0,0,0,0,3.81831424337288,0,0,14.8517668005726,0,0,0,0,0.0969890164884194,0.0882561266915003,0,0,0,0.126621591911757,1.17330829640882,0.160317640503067,0.640358984218058,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,1.39641200636127,0.687481272035051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0.335434687599266,0.0788057072991982,0,0,0,0,1.42939065274673,0,0,2.71499800876856,0.864221491201268,2.93928624098468,0,0,0,0,0,0,0,0,0,0,0.640724475406168,0.157204305099666,1.65695622138878,0,0,0,0,0.544017803369474,0.2506898940227,0.306345576763462,0,0,0,0.244052529803926,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0.829412415681711,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.00371548107998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0.183428598521679,0.115525666150338,0,0,0.198916222116275,7.59624316327498,0,0,0,0,0,0,0,0,0,0,1.09651553371436,13.3977018165109,0,0,0,0,5.46269043812968,7.05752793189023,0.532214220975833,0,0,0,0,0,0.111231401892069,1.25588948560822,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,4.23387050190929,3.89481676524885,1.5510319283216,2.8666168169323,0,0,0,1.29485767437579,1.43727929598746,0,0.485710993059139,0,0,0,0,0,0,0,0,0,1.47088993052343,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0.917458566809082,0,0,0.135982980381829,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0,0,0,0,1.59135266258303,0.267964130156178,0,0,1.49263787330687,0,0.0645889098360061,0.124149428591716,0,0.25458863311266,0.404234377916439,4.57205170583619,1.36893320434112,0.336760265072938,0.0717222053926763,0.332660356546013,0,0,0,0,2.34640942403454,80.4348702723261,18.717224202524,5.3260541934841,0.402547587182052,0 | |||
|short_description=p4@ESR1 | |||
}} |
Revision as of 18:47, 13 September 2013
Short description: | p4@ESR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_ESR1_5end |
Coexpression cluster: | C233_uterus_cervix_ovary_epididymis_colon_rectum_MCF7 |
Association with transcript: | 22bp_to_ENST00000431219, ENST00000456483, NM_001122741, uc010kin.2, uc010kio.2, uc010kip.2_5end |
EntrezGene: | ESR1 |
HGNC: | 3467 |
UniProt: | E7EVR3P03372 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 3.84e-13 | 6 |
stromal cell of endometrium | 3.84e-13 | 6 |
Ontology term | p-value | n |
---|---|---|
internal genitalia | 4.04e-26 | 25 |
embryonic uterus | 9.87e-21 | 22 |
internal female genitalia | 1.25e-20 | 22 |
reproductive organ | 6.47e-20 | 48 |
adult organism | 7.42e-19 | 114 |
reproductive structure | 8.97e-18 | 59 |
reproductive system | 8.97e-18 | 59 |
uterus | 1.56e-17 | 21 |
female reproductive organ | 4.94e-14 | 37 |
female reproductive system | 4.94e-14 | 37 |
female organism | 1.90e-12 | 41 |
pituitary gland | 3.87e-11 | 2 |
muscle structure | 1.53e-10 | 2 |
muscle organ | 1.53e-10 | 2 |
male genital duct | 1.00e-07 | 3 |
internal male genitalia | 1.00e-07 | 3 |
male reproductive organ | 1.92e-07 | 11 |
tongue | 2.83e-07 | 3 |
gustatory system | 2.83e-07 | 3 |
future tongue | 2.83e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 3.84e-13 | 6 |
cell type benign neoplasm | 2.19e-07 | 3 |
leiomyoma | 2.19e-07 | 3 |
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