FFCP PHASE1:Hg19::chr6:151646636..151646655,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9590|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=370|TSSclassifier=S|UniProt=Q02952|association_with_transcript=-10bp_to_NM_144497,uc003qof.2,uc010kim.2_5end|coexpression_cluster_id=C1972|description=CAGE_peak_5_at_AKAP12_5end|id=chr6:151646636..151646655,+|ontology_enrichment_celltype=CL:0000055!1.14e-19!180;CL:0000222!2.84e-15!119;CL:0000057!5.59e-09!75;CL:0002321!1.96e-08!248;CL:0000220!2.54e-08!246;CL:0000680!4.09e-08!57;CL:0000056!4.09e-08!57;CL:0000355!4.09e-08!57;CL:0000183!4.65e-08!59;CL:0002078!1.24e-07!44;CL:0000213!1.30e-07!57;CL:0000215!1.30e-07!57;CL:0002139!2.02e-07!24;CL:0000187!2.17e-07!54|ontology_enrichment_celltype_v019=CL:0002139;1.13e-08;24|ontology_enrichment_celltype_v019_2=CL:0000222,1.06e-13,121;CL:0002139,1.02e-08,24;CL:0002078,1.42e-08,45;CL:0002321,2.52e-08,250;CL:0000213,2.92e-08,58;CL:0000215,2.92e-08,58;CL:0000115,2.22e-07,36|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000119!7.20e-14!312;UBERON:0000483!3.56e-13!309;UBERON:0002049!9.67e-13!79;UBERON:0007798!9.67e-13!79;UBERON:0000477!3.62e-12!286;UBERON:0000481!1.85e-11!347;UBERON:0003914!2.05e-10!118;UBERON:0005256!2.74e-10!143;UBERON:0000914!8.67e-10!83;UBERON:0002329!8.67e-10!83;UBERON:0003077!8.67e-10!83;UBERON:0003059!8.67e-10!83;UBERON:0007282!8.67e-10!83;UBERON:0009618!8.67e-10!83;UBERON:0007285!8.67e-10!83;UBERON:0000055!9.38e-10!69;UBERON:0000490!1.34e-09!138;UBERON:0000468!1.35e-09!659;UBERON:0002100!1.45e-09!216;UBERON:0000486!1.62e-09!82;UBERON:0000475!5.71e-09!365;UBERON:0004535!5.83e-09!110;UBERON:0001009!6.04e-09!113;UBERON:0004290!6.31e-09!70;UBERON:0004111!1.31e-08!241;UBERON:0001134!3.32e-08!61;UBERON:0002036!3.32e-08!61;UBERON:0003082!3.32e-08!61;UBERON:0001981!3.48e-08!60;UBERON:0007500!3.48e-08!60;UBERON:0004537!3.48e-08!60;UBERON:0006965!3.48e-08!60;UBERON:0000025!3.85e-08!194;UBERON:0003104!4.11e-08!238;UBERON:0009142!4.11e-08!238;UBERON:0004872!4.34e-08!84;UBERON:0002385!7.28e-08!63;UBERON:0001015!7.28e-08!63;UBERON:0000383!7.28e-08!63;UBERON:0000467!1.37e-07!625;UBERON:0000480!2.03e-07!626|ontology_enrichment_uberon_v019=UBERON:0004905;3.79e-07;8!UBERON:0000982;3.79e-07;8!UBERON:0004770;3.79e-07;8!UBERON:0006914;9.01e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0002049,6.58e-10,78;UBERON:0007798,6.58e-10,78;UBERON:0000119,9.31e-09,309;UBERON:0007503,1.37e-08,78;UBERON:0000486,1.42e-08,83;UBERON:0000490,1.55e-08,148;UBERON:0004535,3.65e-08,109;UBERON:0000483,4.02e-08,306;UBERON:0002329,9.27e-08,71;UBERON:0003059,9.27e-08,71;UBERON:0007282,9.27e-08,71;UBERON:0004290,9.27e-08,71;UBERON:0009618,9.27e-08,71;UBERON:0007524,1.20e-07,73;UBERON:0001009,1.55e-07,112;UBERON:0003077,1.72e-07,72;UBERON:0007285,1.72e-07,72;UBERON:0003104,1.93e-07,160;UBERON:0009142,1.93e-07,160;UBERON:0000055,2.54e-07,68;UBERON:0004905,3.18e-07,8;UBERON:0000982,3.18e-07,8;UBERON:0004770,3.18e-07,8;UBERON:0006914,6.48e-07,25|phase1_expression=1.09007027562334,0.856402095563933,0.422863212287913,0,0.446961094427288,0,0,1.89515962028049,0.783556884599516,0.245733936501509,0.697801167972428,0,0.263766978228454,3.09415882400117,3.31397375727916,1.34465029290355,1.80808358407193,2.19093027116212,2.92759679274304,0.369363174230364,0.612002073732759,0,3.14859585844162,3.01123735160345,3.64073654824928,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,1.40648818027883,2.53007406669196,1.50401373190767,0.144846518960824,0,0,4.25406677238305,1.99556457716308,1.05401742831751,0.196468613246569,0,0,0,0,0,0,0,0,2.18638648103376,0.860234595106124,1.73570250803797,1.13061588384802,0.838998872419812,3.30141650328081,2.29894463190492,1.29208379584664,3.20189636418039,1.33888245105868,1.61131726843659,1.52054421143703,1.70843440283719,3.30896772311282,2.43042584364528,4.64358587077215,5.16417557040191,7.54496919238259,0,0,2.01521918323448,0,0,0,0.496971951695318,1.39293562831038,0.926864265692532,0.860509862246441,2.12801029319014,1.12135520028461,0,0.24666754841716,4.35695449559673,2.02066008104532,2.7788523529288,1.81628913173918,2.30470369792,1.17160715916898,1.87296046098192,1.71141546463335,1.94283284717341,2.70099346880659,4.69431538667581,4.07307339436521,4.69554593886255,0.61417158655884,4.44300859055791,1.18800285728205,1.7308685049499,0.910161361938026,1.43723628363248,3.36672227908132,3.503318556415,4.71008996323111,0.438977620880838,0,1.50238058906597,0.907457465280168,1.4351170855109,0.427114777637135,1.69545520927649,0.300091096084402,1.03052529238439,0.515281080091258,1.11670113798954,0.506328996723799,0.389748020644795,1.26216887122057,0.920498986422993,5.81925804547723,0,0.604512589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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9590 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=370 | |||
|TSSclassifier=S | |||
|UniProt=Q02952 | |||
|association_with_transcript=-10bp_to_NM_144497,uc003qof.2,uc010kim.2_5end | |||
|coexpression_cluster_id=C1972 | |||
|description=CAGE_peak_5_at_AKAP12_5end | |||
|id=chr6:151646636..151646655,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.14e-19!180;CL:0000222!2.84e-15!119;CL:0000057!5.59e-09!75;CL:0002321!1.96e-08!248;CL:0000220!2.54e-08!246;CL:0000680!4.09e-08!57;CL:0000056!4.09e-08!57;CL:0000355!4.09e-08!57;CL:0000183!4.65e-08!59;CL:0002078!1.24e-07!44;CL:0000213!1.30e-07!57;CL:0000215!1.30e-07!57;CL:0002139!2.02e-07!24;CL:0000187!2.17e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.13e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.06e-13,121;CL:0002139,1.02e-08,24;CL:0002078,1.42e-08,45;CL:0002321,2.52e-08,250;CL:0000213,2.92e-08,58;CL:0000215,2.92e-08,58;CL:0000115,2.22e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!7.20e-14!312;UBERON:0000483!3.56e-13!309;UBERON:0002049!9.67e-13!79;UBERON:0007798!9.67e-13!79;UBERON:0000477!3.62e-12!286;UBERON:0000481!1.85e-11!347;UBERON:0003914!2.05e-10!118;UBERON:0005256!2.74e-10!143;UBERON:0000914!8.67e-10!83;UBERON:0002329!8.67e-10!83;UBERON:0003077!8.67e-10!83;UBERON:0003059!8.67e-10!83;UBERON:0007282!8.67e-10!83;UBERON:0009618!8.67e-10!83;UBERON:0007285!8.67e-10!83;UBERON:0000055!9.38e-10!69;UBERON:0000490!1.34e-09!138;UBERON:0000468!1.35e-09!659;UBERON:0002100!1.45e-09!216;UBERON:0000486!1.62e-09!82;UBERON:0000475!5.71e-09!365;UBERON:0004535!5.83e-09!110;UBERON:0001009!6.04e-09!113;UBERON:0004290!6.31e-09!70;UBERON:0004111!1.31e-08!241;UBERON:0001134!3.32e-08!61;UBERON:0002036!3.32e-08!61;UBERON:0003082!3.32e-08!61;UBERON:0001981!3.48e-08!60;UBERON:0007500!3.48e-08!60;UBERON:0004537!3.48e-08!60;UBERON:0006965!3.48e-08!60;UBERON:0000025!3.85e-08!194;UBERON:0003104!4.11e-08!238;UBERON:0009142!4.11e-08!238;UBERON:0004872!4.34e-08!84;UBERON:0002385!7.28e-08!63;UBERON:0001015!7.28e-08!63;UBERON:0000383!7.28e-08!63;UBERON:0000467!1.37e-07!625;UBERON:0000480!2.03e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;3.79e-07;8!UBERON:0000982;3.79e-07;8!UBERON:0004770;3.79e-07;8!UBERON:0006914;9.01e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,6.58e-10,78;UBERON:0007798,6.58e-10,78;UBERON:0000119,9.31e-09,309;UBERON:0007503,1.37e-08,78;UBERON:0000486,1.42e-08,83;UBERON:0000490,1.55e-08,148;UBERON:0004535,3.65e-08,109;UBERON:0000483,4.02e-08,306;UBERON:0002329,9.27e-08,71;UBERON:0003059,9.27e-08,71;UBERON:0007282,9.27e-08,71;UBERON:0004290,9.27e-08,71;UBERON:0009618,9.27e-08,71;UBERON:0007524,1.20e-07,73;UBERON:0001009,1.55e-07,112;UBERON:0003077,1.72e-07,72;UBERON:0007285,1.72e-07,72;UBERON:0003104,1.93e-07,160;UBERON:0009142,1.93e-07,160;UBERON:0000055,2.54e-07,68;UBERON:0004905,3.18e-07,8;UBERON:0000982,3.18e-07,8;UBERON:0004770,3.18e-07,8;UBERON:0006914,6.48e-07,25 | |||
|phase1_expression=1.09007027562334,0.856402095563933,0.422863212287913,0,0.446961094427288,0,0,1.89515962028049,0.783556884599516,0.245733936501509,0.697801167972428,0,0.263766978228454,3.09415882400117,3.31397375727916,1.34465029290355,1.80808358407193,2.19093027116212,2.92759679274304,0.369363174230364,0.612002073732759,0,3.14859585844162,3.01123735160345,3.64073654824928,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,1.40648818027883,2.53007406669196,1.50401373190767,0.144846518960824,0,0,4.25406677238305,1.99556457716308,1.05401742831751,0.196468613246569,0,0,0,0,0,0,0,0,2.18638648103376,0.860234595106124,1.73570250803797,1.13061588384802,0.838998872419812,3.30141650328081,2.29894463190492,1.29208379584664,3.20189636418039,1.33888245105868,1.61131726843659,1.52054421143703,1.70843440283719,3.30896772311282,2.43042584364528,4.64358587077215,5.16417557040191,7.54496919238259,0,0,2.01521918323448,0,0,0,0.496971951695318,1.39293562831038,0.926864265692532,0.860509862246441,2.12801029319014,1.12135520028461,0,0.24666754841716,4.35695449559673,2.02066008104532,2.7788523529288,1.81628913173918,2.30470369792,1.17160715916898,1.87296046098192,1.71141546463335,1.94283284717341,2.70099346880659,4.69431538667581,4.07307339436521,4.69554593886255,0.61417158655884,4.44300859055791,1.18800285728205,1.7308685049499,0.910161361938026,1.43723628363248,3.36672227908132,3.503318556415,4.71008996323111,0.438977620880838,0,1.50238058906597,0.907457465280168,1.4351170855109,0.427114777637135,1.69545520927649,0.300091096084402,1.03052529238439,0.515281080091258,1.11670113798954,0.506328996723799,0.389748020644795,1.26216887122057,0.920498986422993,5.81925804547723,0,0.604512589365842,1.18692414617341,0,0.272746120590835,0,0.365921118388786,1.32529768321485,0.464775771478074,0.621966330092223,0.756962552626885,0,0,0,0,2.3218396401599,6.49691533502627,0.118306800039844,0.337169380156203,0,0.55146986366197,0.435758888184812,0.237270619111097,0.134831308160164,0.196221465125346,0.38474715694639,3.69077727312324,0,0.8231480226628,0,0,0,0.590789906681404,0,0,1.02940686179115,0,0,0,0.0925884451585296,0,0,0,2.20267769452646,1.40890433082986,2.30986316417718,1.85194205030644,2.47330397904978,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0.12624243342638,2.28592419451809,2.29193055334967,2.34434894420094,0,1.02827492703324,1.8020583470635,3.14409075893636,1.12131084345361,1.74384027533312,2.86019314701705,0,0,3.381211010224,1.86156681609409,3.12022310734098,0.514414748524284,0,0.799266537048298,0.428933980974443,0,0.823240336780769,0.65147236858747,0.355391948742546,0.791951872933429,0.904318131178758,0.871533458600294,1.3996218765488,0,0,0,2.63587341040741,1.14861935834114,11.4109524032575,1.15825045334063,2.4657158706046,1.61154866915906,0,0,0,0,1.27047312111232,0,0,1.17261385734044,0.637938751653163,0,0,0,4.04881922673162,4.50153468953709,2.17012018959788,2.70362119990049,1.96271887676878,1.41932173530541,1.17141414992713,0.300946099727719,0,1.03473071292505,2.65690239414175,0.737476674166813,2.95404289191482,1.76221041716467,0.686286847621712,0,0,0,0,0,0,0.744323423456331,0.767309866440312,0,0.896974044789907,0.511707249066704,0.160853921143607,0,1.69630663182921,1.9531789784444,2.7101961484557,2.59627214591811,2.20799719073923,0.120859449591622,0.200506470303285,0.184161977871793,1.03333003348146,0.728364672026868,0.524497659837696,0,1.07821471946181,0.784349769176855,0,0.949964660035881,0,1.02056223165909,2.37507507712353,4.62681758070868,1.35473218771926,1.00337954770971,1.27438136522519,0.831076008928724,1.56712328305525,0,0,1.28225062558195,0.328014645699706,0,0.824328093181778,2.93022287418699,4.04296549610881,0,0.650060246036521,0,0.773365746336976,2.00263202249038,2.30255512089194,3.03240459465967,4.51165028446749,3.48040065394148,1.61930592090592,0.534192213880424,0,0.768760269460425,0.255225424989168,0.2023155617111,0.464845549297286,1.5740617341532,1.3940745403212,0.924100740528266,0,1.73986598415015,1.48259375283136,1.5743737541619,1.48863347743867,6.01120906965579,0.762520775695299,0.255897791311334,4.2793898803392,0.636406495851874,1.56989728039846,2.51821440616641,1.92175920815238,1.53156123049392,0.606547444719948,0,0.842516912477962,0.48763373908959,1.46228093778771,0,1.63799893689583,0.565621727814851,1.13008116620243,0.551365343546124,1.32687795048244,0.438450885253763,0,1.9676842561399,0.811641507850816,0,0.563391205064483,2.29458163526482,0.294747123039363,0.7133421029625,1.77380532035299,2.9555068941673,6.58589785919804,0.379473173765715,1.39973888097993,0.192444225451024,0,0,0.470719003883896,0.43050537267123,0,0.443430153536676,2.29723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0.735120647943095,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,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| |||
|short_description=p5@AKAP12 | |||
}} |
Revision as of 18:45, 13 September 2013
Short description: | p5@AKAP12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_AKAP12_5end |
Coexpression cluster: | C1972_Fibroblast_Synoviocyte_Endothelial_osteosarcoma_mature_cerebellum_alveolar |
Association with transcript: | -10bp_to_NM_144497, uc003qof.2, uc010kim.2_5end |
EntrezGene: | AKAP12 |
HGNC: | 370 |
UniProt: | Q02952 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.06e-13 | 121 |
endothelial cell of vascular tree | 1.02e-08 | 24 |
meso-epithelial cell | 1.42e-08 | 45 |
embryonic cell | 2.52e-08 | 250 |
lining cell | 2.92e-08 | 58 |
barrier cell | 2.92e-08 | 58 |
endothelial cell | 2.22e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
vasculature | 6.58e-10 | 78 |
vascular system | 6.58e-10 | 78 |
cell layer | 9.31e-09 | 309 |
epithelial vesicle | 1.37e-08 | 78 |
multilaminar epithelium | 1.42e-08 | 83 |
unilaminar epithelium | 1.55e-08 | 148 |
cardiovascular system | 3.65e-08 | 109 |
epithelium | 4.02e-08 | 306 |
somite | 9.27e-08 | 71 |
presomitic mesoderm | 9.27e-08 | 71 |
presumptive segmental plate | 9.27e-08 | 71 |
dermomyotome | 9.27e-08 | 71 |
trunk paraxial mesoderm | 9.27e-08 | 71 |
dense mesenchyme tissue | 1.20e-07 | 73 |
circulatory system | 1.55e-07 | 112 |
paraxial mesoderm | 1.72e-07 | 72 |
presumptive paraxial mesoderm | 1.72e-07 | 72 |
mesenchyme | 1.93e-07 | 160 |
entire embryonic mesenchyme | 1.93e-07 | 160 |
vessel | 2.54e-07 | 68 |
articulation | 3.18e-07 | 8 |
skeletal joint | 3.18e-07 | 8 |
articular system | 3.18e-07 | 8 |
squamous epithelium | 6.48e-07 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.