FFCP PHASE1:Hg19::chr6:134495992..134496010,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6446|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10810|TSSclassifier=S|UniProt=E9PR89|association_with_transcript=0bp_to_ENST00000367857,ENST00000472859,ENST00000474427,ENST00000475719,ENST00000530421,ENST00000532856,ENST00000534658,uc011ect.1_5end|coexpression_cluster_id=C537|description=CAGE_peak_1_at_SGK1_5end|id=chr6:134495992..134496010,-|ontology_enrichment_celltype=CL:0000766!2.33e-32!76;CL:0000557!1.11e-27!71;CL:0002009!3.30e-27!65;CL:0002194!7.60e-26!63;CL:0000576!7.60e-26!63;CL:0000040!7.60e-26!63;CL:0000559!7.60e-26!63;CL:0000860!9.73e-26!45;CL:0000839!1.78e-25!70;CL:0002057!2.98e-24!42;CL:0000763!1.06e-08!112;CL:0000049!1.06e-08!112;CL:0000738!2.61e-07!140;CL:0000235!5.93e-07!10|ontology_enrichment_celltype_v019=CL:0000473;3.14e-19;39!CL:0000234;3.14e-19;39!CL:0000860;3.62e-19;33!CL:0002057;3.62e-19;33!CL:0000576;2.33e-14;48!CL:0000766;8.68e-14;69|ontology_enrichment_celltype_v019_2=CL:0000766,1.96e-30,72;CL:0000473,4.14e-28,48;CL:0000234,4.14e-28,48;CL:0000557,8.47e-26,67;CL:0002009,2.49e-25,61;CL:0000860,2.98e-24,42;CL:0002057,2.98e-24,42;CL:0002194,5.55e-24,59;CL:0000576,5.55e-24,59;CL:0000040,5.55e-24,59;CL:0000559,5.55e-24,59;CL:0000839,1.28e-23,66;CL:0000763,1.43e-07,108;CL:0000049,1.43e-07,108|ontology_enrichment_development_v019=CL:0002057;1.10e-17;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.74e-25!80;UBERON:0003081!7.00e-25!216;UBERON:0002390!2.03e-22!102;UBERON:0003061!2.03e-22!102;UBERON:0002193!1.15e-21!112;UBERON:0001474!1.38e-21!86;UBERON:0002405!4.88e-20!115;UBERON:0004765!1.27e-17!101;UBERON:0001434!1.27e-17!101;UBERON:0002204!1.53e-16!167;UBERON:0000467!8.47e-16!625;UBERON:0000480!1.11e-15!626;UBERON:0000923!4.16e-15!604;UBERON:0005291!4.16e-15!604;UBERON:0006598!4.16e-15!604;UBERON:0002532!4.16e-15!604;UBERON:0002050!6.04e-15!605;UBERON:0005423!6.04e-15!605;UBERON:0000468!6.32e-15!659;UBERON:0000922!9.63e-14!612;UBERON:0000062!2.73e-11!511;UBERON:0000926!2.93e-11!448;UBERON:0004120!2.93e-11!448;UBERON:0006603!2.93e-11!448;UBERON:0004535!1.02e-07!110;UBERON:0001637!3.59e-07!42;UBERON:0003509!3.59e-07!42;UBERON:0004572!3.59e-07!42;UBERON:0001009!3.89e-07!113|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.20e-23,76;UBERON:0003081,1.50e-23,203;UBERON:0002390,1.08e-20,98;UBERON:0003061,1.08e-20,98;UBERON:0002193,5.51e-20,108;UBERON:0001474,7.67e-20,82;UBERON:0002405,1.41e-19,93;UBERON:0004765,1.74e-17,90;UBERON:0001434,9.91e-15,100;UBERON:0000926,1.17e-14,315;UBERON:0004120,1.17e-14,315;UBERON:0006603,1.17e-14,315;UBERON:0005423,1.24e-14,581;UBERON:0002050,1.49e-14,564;UBERON:0000923,3.06e-14,560;UBERON:0010316,3.06e-14,560;UBERON:0005291,3.06e-14,560;UBERON:0006598,3.06e-14,560;UBERON:0010317,3.06e-14,560;UBERON:0002532,3.06e-14,560;UBERON:0000922,5.56e-14,592;UBERON:0002204,8.20e-14,167;UBERON:0004535,1.75e-07,109;UBERON:0001637,3.59e-07,42;UBERON:0003509,3.59e-07,42;UBERON:0004572,3.59e-07,42;UBERON:0001009,6.50e-07,112|phase1_expression=111.00548973431,132.528224288519,149.552622745825,129.094554875538,140.792744744596,247.744140844505,50.6599756336621,25.2687949370732,7.05201196139564,93.1331619340719,20.2362338712004,54.6103430325431,74.1185208821955,36.1397750643336,31.8141480698799,210.437770839406,186.232609159409,181.116902416069,141.500511649247,126.075963470631,53.8561824884828,69.9004028896136,15.170507317946,18.3411729597665,21.3422487311165,1.29902789771517,1.06730766284929,0.787107813136792,641.577135540562,588.794296681124,694.659945319233,29.4214791833257,36.14471025339,17.7481924880058,30.4446098280585,64.1183238518271,8.22081230137572,625.46081623249,1029.39464886424,753.244732254722,403.047853631864,712.566065241755,354.423981064641,438.084893442828,709.651022247584,411.422567774536,1272.78140609553,1477.32622166242,2081.2268124151,970.674131694936,917.05532937418,1546.12081901157,2086.40085981802,2446.3869507827,3106.6836024742,631.176564486354,980.278891007782,1064.06569884748,871.114757687589,1244.88369602817,1568.29396958505,254.315352443958,459.165339844997,412.159333765115,370.88740696733,407.94997655293,596.040892288765,1009.26588833634,1134.22534756394,1770.30627319141,391.088078701156,993.61306189445,910.778751054865,526.236918203047,468.792481422921,457.475164499276,478.407640052923,598.004387294878,589.54145200489,128.825760171044,157.34309166448,115.443745179249,12.3197371122926,14.1996038928154,13.3426388079533,30.297845802222,4.40435585739614,13.2193061189531,6.61044872784862,6.67837628174755,66.5979173858055,86.9111040268989,74.5432794844196,26.4342657158052,170.955111709368,7.11137028892708,97.5680459764612,113.187099671759,167.154018686601,0.83593247695339,20.2071805312826,10.8892995318989,9.74133642039557,4.56782873229212,26.2199257652605,10.4120930454302,9.47813523177554,2.17755243533648,1.95089021339817,8.87964684859851,7.18510046243206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151437176283,292.586357383739,716.932159012273,498.017956761969,49.2034150535679,50.4791686618706,45.797930472165,63.0924491143255,189.730532951194,135.098202566203,118.230414260241,41.2604784432336,124.790613660547,171.80516656354,52.8312081190388,281.318118363646,289.674229493472,92.7618016215876,291.300197789081,228.241237322301,1.28120759293973,67.3589166375837,113.339763654164,146.415683884683,37.9977602236807,16.8738347197971,18.9735857336779,32.7609848846413,14.9921474339769,13.5239758949521,27.1982858362705,3.30744362051837,174.109344437085,55.0490474959831,204.909922630299,24.3390343431833,86.4687391445832,0.639471856518258,2.91126990771041,69.6688122421621,2.40261204022431,61.2734433134031,115.00303177501,112.781545475692,22.3457967189298,146.282001300573,24.9203114203961,22.4159809519932,154.82473928021,65.842777630938,76.6896947651727,79.3500827423276,141.914500701807,66.6628183782454,8.82250936776013,67.290006647684,83.1599575004033,109.932453599549,221.519400656815,41.2894031717091,111.708016499703,523.908895991784,63.3094278475497,89.056430461753,9.15014621734864,286.400930353972,48.6109215575483,178.966708572378,5.76194727859129,526.362942877451,38.5904385026488,74.7641061725629,121.84818338376,95.489299983547,91.3821824894197,15.3152946525101,149.674370352011,65.4998755473868,781.571809934154,37.9454410089598,271.600830790291,299.292512774753,74.6567693211057,25.270503239994,111.94239114525,34.5701962667338,38.0703380951069,116.50012232229,79.9796926524245,13.0013224972365,8.56481794568932,40.2669566323137,54.8333408806847,38.6775585373029,10.9579046461139,70.1764671460519,23.4098327064655,312.995786949578,9.32280309223087,12.089108238285,1.04314963381548,157.93713885186,126.401860139452,137.257655583536,77.4210821231783,78.7316066641108,199.152757229541,231.354393921113,115.584664702124,61.6297476383495,52.4248791772701,30.5772460472779,335.566295393377,16.1947885465151,29.6260557706915,39.4931590684616,33.7760634557053,22.0364741954258,66.056695056043,44.4484980578001,33.0258286767871,6.18384472043357,7.68033357864928,29.2441774542841,16.6059127923341,295.345503079104,40.6520782537361,5.17349025997675,26.7211670711757,2.12108892391463,361.600196425729,170.504633787747,91.2936371580144,159.731487806548,44.0784575325513,99.5874369191767,16.3903495716883,86.4201062851383,55.7573897310793,3.37013740094507,137.303240990345,30.2761327046997,289.115939216477,28.24110963258,97.7037714043444,5.67255897442491,101.573153378957,69.5630683971825,72.5615736951327,160.93708111005,13.6259738821885,18.3566160899009,0.506794004045748,31.7185260497563,94.862178869274,116.982207107858,48.6372626227208,84.7963633062099,94.3233738149748,287.721795492196,270.477284178856,63.7569605883933,49.2793373129943,37.2678009753755,101.554232588024,11.2131862580613,84.3961318768467,37.1895627683123,163.940711166412,105.065623433181,117.59668456347,149.54079824373,67.1973920222947,111.278268191202,133.942819076533,175.695776881115,19.9411948676623,28.1569130884145,85.4467694838236,32.9585904435748,22.6357303223074,42.2674966541155,13.4638766767358|short_description=p1@SGK1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=6446 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10810 | |||
|TSSclassifier=S | |||
|UniProt=E9PR89 | |||
|association_with_transcript=0bp_to_ENST00000367857,ENST00000472859,ENST00000474427,ENST00000475719,ENST00000530421,ENST00000532856,ENST00000534658,uc011ect.1_5end | |||
|coexpression_cluster_id=C537 | |||
|description=CAGE_peak_1_at_SGK1_5end | |||
|id=chr6:134495992..134496010,- | |||
|ontology_enrichment_celltype=CL:0000766!2.33e-32!76;CL:0000557!1.11e-27!71;CL:0002009!3.30e-27!65;CL:0002194!7.60e-26!63;CL:0000576!7.60e-26!63;CL:0000040!7.60e-26!63;CL:0000559!7.60e-26!63;CL:0000860!9.73e-26!45;CL:0000839!1.78e-25!70;CL:0002057!2.98e-24!42;CL:0000763!1.06e-08!112;CL:0000049!1.06e-08!112;CL:0000738!2.61e-07!140;CL:0000235!5.93e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000473;3.14e-19;39!CL:0000234;3.14e-19;39!CL:0000860;3.62e-19;33!CL:0002057;3.62e-19;33!CL:0000576;2.33e-14;48!CL:0000766;8.68e-14;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.96e-30,72;CL:0000473,4.14e-28,48;CL:0000234,4.14e-28,48;CL:0000557,8.47e-26,67;CL:0002009,2.49e-25,61;CL:0000860,2.98e-24,42;CL:0002057,2.98e-24,42;CL:0002194,5.55e-24,59;CL:0000576,5.55e-24,59;CL:0000040,5.55e-24,59;CL:0000559,5.55e-24,59;CL:0000839,1.28e-23,66;CL:0000763,1.43e-07,108;CL:0000049,1.43e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.10e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019= | |||
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| |||
|short_description=p1@SGK1 | |||
}} |
Revision as of 18:04, 13 September 2013
Short description: | p1@SGK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SGK1_5end |
Coexpression cluster: | C537_immature_CD14_migratory_Mast_CD4_Dendritic_Basophils |
Association with transcript: | 0bp_to_ENST00000367857, ENST00000472859, ENST00000474427, ENST00000475719, ENST00000530421, ENST00000532856, ENST00000534658, uc011ect.1_5end |
EntrezGene: | SGK1 |
HGNC: | 10810 |
UniProt: | E9PR89 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.96e-30 | 72 |
defensive cell | 4.14e-28 | 48 |
phagocyte | 4.14e-28 | 48 |
granulocyte monocyte progenitor cell | 8.47e-26 | 67 |
macrophage dendritic cell progenitor | 2.49e-25 | 61 |
classical monocyte | 2.98e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.98e-24 | 42 |
monopoietic cell | 5.55e-24 | 59 |
monocyte | 5.55e-24 | 59 |
monoblast | 5.55e-24 | 59 |
promonocyte | 5.55e-24 | 59 |
myeloid lineage restricted progenitor cell | 1.28e-23 | 66 |
myeloid cell | 1.43e-07 | 108 |
common myeloid progenitor | 1.43e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.20e-23 | 76 |
lateral plate mesoderm | 1.50e-23 | 203 |
hematopoietic system | 1.08e-20 | 98 |
blood island | 1.08e-20 | 98 |
hemolymphoid system | 5.51e-20 | 108 |
bone element | 7.67e-20 | 82 |
immune system | 1.41e-19 | 93 |
skeletal element | 1.74e-17 | 90 |
skeletal system | 9.91e-15 | 100 |
mesoderm | 1.17e-14 | 315 |
mesoderm-derived structure | 1.17e-14 | 315 |
presumptive mesoderm | 1.17e-14 | 315 |
developing anatomical structure | 1.24e-14 | 581 |
embryonic structure | 1.49e-14 | 564 |
germ layer | 3.06e-14 | 560 |
germ layer / neural crest | 3.06e-14 | 560 |
embryonic tissue | 3.06e-14 | 560 |
presumptive structure | 3.06e-14 | 560 |
germ layer / neural crest derived structure | 3.06e-14 | 560 |
epiblast (generic) | 3.06e-14 | 560 |
embryo | 5.56e-14 | 592 |
musculoskeletal system | 8.20e-14 | 167 |
cardiovascular system | 1.75e-07 | 109 |
artery | 3.59e-07 | 42 |
arterial blood vessel | 3.59e-07 | 42 |
arterial system | 3.59e-07 | 42 |
circulatory system | 6.50e-07 | 112 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.