FFCP PHASE1:Hg19::chr6:64345869..64345878,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23469|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8921|TSSclassifier=S|UniProt=Q92576,B3KP41|association_with_transcript=128bp_to_ENST00000262043,ENST00000494284_5end|description=CAGE_peak_7_at_PHF3_5end|id=chr6:64345869..64345878,+|ontology_enrichment_celltype=CL:0000738!6.47e-18!140;CL:0000037!1.37e-17!172;CL:0000566!1.37e-17!172;CL:0000988!2.34e-16!182;CL:0002032!8.30e-16!165;CL:0000837!8.30e-16!165;CL:0002031!8.60e-16!124;CL:0002057!2.37e-14!42;CL:0000557!2.62e-14!71;CL:0002087!4.72e-14!119;CL:0000763!1.23e-13!112;CL:0000049!1.23e-13!112;CL:0000766!1.47e-13!76;CL:0000860!2.25e-13!45;CL:0000839!2.38e-13!70;CL:0002009!7.32e-13!65;CL:0002194!7.10e-12!63;CL:0000576!7.10e-12!63;CL:0000040!7.10e-12!63;CL:0000559!7.10e-12!63|ontology_enrichment_celltype_v019=CL:0002393;1.13e-09;6!CL:0002397;1.13e-09;6|ontology_enrichment_celltype_v019_2=CL:0000738,4.70e-16,136;CL:0000037,8.12e-14,168;CL:0000988,9.90e-13,177;CL:0002032,1.91e-12,161;CL:0000837,1.91e-12,161;CL:0002031,4.27e-12,120;CL:0002087,2.37e-10,115;CL:0000766,4.31e-10,72;CL:0000557,1.00e-09,67;CL:0002393,1.83e-09,9;CL:0002397,1.83e-09,9;CL:0000763,2.53e-08,108;CL:0000049,2.53e-08,108;CL:0002009,4.84e-08,61;CL:0000473,5.72e-08,48;CL:0000234,5.72e-08,48;CL:0000860,7.19e-08,42;CL:0002057,7.19e-08,42;CL:0000839,3.33e-07,66;CL:0002194,4.65e-07,59;CL:0000576,4.65e-07,59;CL:0000040,4.65e-07,59;CL:0000559,4.65e-07,59|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!4.68e-13!102;UBERON:0003061!4.68e-13!102;UBERON:0002371!4.42e-11!80;UBERON:0002193!8.21e-11!112;UBERON:0001474!1.76e-10!86;UBERON:0002405!1.15e-08!115;UBERON:0004765!8.54e-08!101;UBERON:0001434!8.54e-08!101|ontology_enrichment_uberon_v019=UBERON:0003714;4.41e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.59e-08,76;UBERON:0003714,4.64e-08,2;UBERON:0001474,2.50e-07,82;UBERON:0002405,4.67e-07,93|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0,0.0764134057479513,0.164201178899891,0.157421562627358,0,1.91914699048606,0.464448369948228,0,0,0.369754010166788,0.232401601740905,0.284338464974843,0.293600439334847,1.10799081706375,1.00272223735071,1.51907609501096,0.447830948479849,0,0,0.145398238779565,1.13362783106643,0.970336244751265,0.929716147622738,0.822335776043652,1.23882548358041,0.863077176966451,0.512321413058201,0.945928919554341,0.689491361473237,0.645484683583826,1.35426486594342,0.752969358170419,0.545812300115692,0.224723484445085,1.22433556948361,1.28371610830437,1.27867425159808,0.329851300186716,0.598390972864896,0,0,0.56738522469114,0,0.75374599577023,0.521482918420201,0.868755378820466,0.605399502633369,0.368277635987565,0.316462387440884,1.47878700418359,0.212604299965044,0.209658645508376,0.561643155732475,0.600707571366025,0.803627933485401,0,0.59675003159727,1.0959849225878,0,0,0,0,0.400395987036012,0,0,0.954053754535364,1.1384259382189,1.17447437874188,0.764546456250458,3.96513985737078,3.36305137788922,1.05353633910031,1.180258620683,0.786021525498329,0.616804496998528,0,0.651844533267181,0,0,0.334231370655521,0.294605907474837,0,0.541607727530031,0.640456598628376,0,0.328875809207352,0.552700035571697,0.579606171470105,0.296573126324121,1.07016331235885,1.04535523804977,0.226618685395132,1.91610246800961,0.34362744548263,0.506039384039006,1.27426165729639,0,0,0.451725357233318,0.255973222308837,0,0.473554504088034,0,1.20964045934839,0.802320587350522,1.30341963494519,0,0,0.383587685530591,0,0,0,0,0.486634870302636,0.189069634328136,0.221729397462564,0.087834785693126,0.130979075497713,0,0,1.29818957461873,0.174129737299267,0.664789802594326,0.953962497221368,1.14398982156026,2.22874500797739,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,1.31780417436063,0,0,0,0.12663051166458,0.397227542439656,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0.358779271377724,0,0,0,0.309157587715317,0.257640540045629,0,0.168776332241266,0.0974370051611986,0,0.184099797284599,0,0,0.201504196455281,0,0,0,0,0.121973706129595,0.397589304964456,0.348581828608555,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0.441175890929576,0.217879444092406,0.237270619111097,0.404493924480493,0.196221465125346,1.15424147083917,0,0,0,0,1.26755034821831,0,0,0,0.245976877086227,0,0.219500570817251,0,0,0,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0.858486162094873,0.492434012174795,0,0,0,0.16798212819886,0.283550194484773,0.0895585227028483,0,0,1.97065295158377,0.352193736052904,0,0.288239906833923,0.75745460055828,0.063497894292169,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23469 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8921 | |||
|TSSclassifier=S | |||
|UniProt=Q92576,B3KP41 | |||
|association_with_transcript=128bp_to_ENST00000262043,ENST00000494284_5end | |||
|description=CAGE_peak_7_at_PHF3_5end | |||
|id=chr6:64345869..64345878,+ | |||
|ontology_enrichment_celltype=CL:0000738!6.47e-18!140;CL:0000037!1.37e-17!172;CL:0000566!1.37e-17!172;CL:0000988!2.34e-16!182;CL:0002032!8.30e-16!165;CL:0000837!8.30e-16!165;CL:0002031!8.60e-16!124;CL:0002057!2.37e-14!42;CL:0000557!2.62e-14!71;CL:0002087!4.72e-14!119;CL:0000763!1.23e-13!112;CL:0000049!1.23e-13!112;CL:0000766!1.47e-13!76;CL:0000860!2.25e-13!45;CL:0000839!2.38e-13!70;CL:0002009!7.32e-13!65;CL:0002194!7.10e-12!63;CL:0000576!7.10e-12!63;CL:0000040!7.10e-12!63;CL:0000559!7.10e-12!63 | |||
|ontology_enrichment_celltype_v019=CL:0002393;1.13e-09;6!CL:0002397;1.13e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.70e-16,136;CL:0000037,8.12e-14,168;CL:0000988,9.90e-13,177;CL:0002032,1.91e-12,161;CL:0000837,1.91e-12,161;CL:0002031,4.27e-12,120;CL:0002087,2.37e-10,115;CL:0000766,4.31e-10,72;CL:0000557,1.00e-09,67;CL:0002393,1.83e-09,9;CL:0002397,1.83e-09,9;CL:0000763,2.53e-08,108;CL:0000049,2.53e-08,108;CL:0002009,4.84e-08,61;CL:0000473,5.72e-08,48;CL:0000234,5.72e-08,48;CL:0000860,7.19e-08,42;CL:0002057,7.19e-08,42;CL:0000839,3.33e-07,66;CL:0002194,4.65e-07,59;CL:0000576,4.65e-07,59;CL:0000040,4.65e-07,59;CL:0000559,4.65e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.68e-13!102;UBERON:0003061!4.68e-13!102;UBERON:0002371!4.42e-11!80;UBERON:0002193!8.21e-11!112;UBERON:0001474!1.76e-10!86;UBERON:0002405!1.15e-08!115;UBERON:0004765!8.54e-08!101;UBERON:0001434!8.54e-08!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0003714;4.41e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.59e-08,76;UBERON:0003714,4.64e-08,2;UBERON:0001474,2.50e-07,82;UBERON:0002405,4.67e-07,93 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0,0.0764134057479513,0.164201178899891,0.157421562627358,0,1.91914699048606,0.464448369948228,0,0,0.369754010166788,0.232401601740905,0.284338464974843,0.293600439334847,1.10799081706375,1.00272223735071,1.51907609501096,0.447830948479849,0,0,0.145398238779565,1.13362783106643,0.970336244751265,0.929716147622738,0.822335776043652,1.23882548358041,0.863077176966451,0.512321413058201,0.945928919554341,0.689491361473237,0.645484683583826,1.35426486594342,0.752969358170419,0.545812300115692,0.224723484445085,1.22433556948361,1.28371610830437,1.27867425159808,0.329851300186716,0.598390972864896,0,0,0.56738522469114,0,0.75374599577023,0.521482918420201,0.868755378820466,0.605399502633369,0.368277635987565,0.316462387440884,1.47878700418359,0.212604299965044,0.209658645508376,0.561643155732475,0.600707571366025,0.803627933485401,0,0.59675003159727,1.0959849225878,0,0,0,0,0.400395987036012,0,0,0.954053754535364,1.1384259382189,1.17447437874188,0.764546456250458,3.96513985737078,3.36305137788922,1.05353633910031,1.180258620683,0.786021525498329,0.616804496998528,0,0.651844533267181,0,0,0.334231370655521,0.294605907474837,0,0.541607727530031,0.640456598628376,0,0.328875809207352,0.552700035571697,0.579606171470105,0.296573126324121,1.07016331235885,1.04535523804977,0.226618685395132,1.91610246800961,0.34362744548263,0.506039384039006,1.27426165729639,0,0,0.451725357233318,0.255973222308837,0,0.473554504088034,0,1.20964045934839,0.802320587350522,1.30341963494519,0,0,0.383587685530591,0,0,0,0,0.486634870302636,0.189069634328136,0.221729397462564,0.087834785693126,0.130979075497713,0,0,1.29818957461873,0.174129737299267,0.664789802594326,0.953962497221368,1.14398982156026,2.22874500797739,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,1.31780417436063,0,0,0,0.12663051166458,0.397227542439656,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0.358779271377724,0,0,0,0.309157587715317,0.257640540045629,0,0.168776332241266,0.0974370051611986,0,0.184099797284599,0,0,0.201504196455281,0,0,0,0,0.121973706129595,0.397589304964456,0.348581828608555,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0.441175890929576,0.217879444092406,0.237270619111097,0.404493924480493,0.196221465125346,1.15424147083917,0,0,0,0,1.26755034821831,0,0,0,0.245976877086227,0,0.219500570817251,0,0,0,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0.858486162094873,0.492434012174795,0,0,0,0.16798212819886,0.283550194484773,0.0895585227028483,0,0,1.97065295158377,0.352193736052904,0,0.288239906833923,0.75745460055828,0.063497894292169,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0.199945982364114,1.2162378064119,0,0,0.239624855491583,0,0,0.144781306667579,0,0.179060963239896,0,1.37921532141349,0.431255149719035,1.15508732651774,1.01637849688985,0,0,0.167516265334349,0,0.749007023947182,0,2.07207756718018,0,0,0.271265023699736,0.207970861530807,0.178428988797162,0,0,0.300946099727719,0,0,0,0,0,0,0,0.82707210449155,0.431428401637234,0.640365346820666,0.303127571446259,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0,0.241718899183244,0,0.184161977871793,0,0.182091168006717,0.262248829918848,0,0.15403067420883,0,0,0.105551628892876,0,0.170093705276516,0.431831832204279,0,0,0,0,0,0,0.438519753291869,0.522870902049801,0,0,0.325378394664303,0.412164046590889,0.0915694648183434,0.495056999523528,0,0,0,0,0.154048617114644,0.15350367472613,0.413509717453592,0,0,0.0852266274161009,0.178064071293475,0.165284915360978,0,0.765676274967505,0.6069466851333,0.464845549297286,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0,1.34060455107157,0,0.376575203107117,0,0,0,0.459446800413919,0.507447609232169,0.764637207142375,0.569647187174163,0.476463550915578,0,0,0.540031437238115,0,0.854592569019785,0.962479855263359,0.245040215981032,0,0,0.0711418433484141,0.159426272728822,0,0.191505370132367,0.211673582723883,0,0.561594356226918,0.228234679033192,0,0,0.169291777801603,0.321176150207399,0.201799707191048,0,0,0.921722292925374,0.223676107892416,0.166849141711909,0.19538809540204,0.556812347790485,0,0.270455678475983,0.33307196799782,0,0.935702702041099,0,0,0,0,1.19372242368845,0.296964680832639,0.921482106297696,0,0.140669416410513,0,0,0,0,0.552567831062295,0,0.102268682502155,0.123084805461069,0,0,0,1.02314474045374,0.0986434056369336,0,0,0,0.278304294485554,0,0.260427761085233,0.349839999984783,0.724999575434793,0.568967241427498,0.254253650292766,0.236387681767936,0,0,0,1.77148277162768,0.482385754501632,0,0.663475559587348,0,0,0.544692317594951,0.139423744278603,0.1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| |||
|short_description=p7@PHF3 | |||
}} |
Revision as of 21:35, 13 September 2013
Short description: | p7@PHF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_PHF3_5end |
Coexpression cluster: | NA |
Association with transcript: | 128bp_to_ENST00000262043, ENST00000494284_5end |
EntrezGene: | PHF3 |
HGNC: | 8921 |
UniProt: | Q92576B3KP41 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.70e-16 | 136 |
hematopoietic stem cell | 8.12e-14 | 168 |
hematopoietic cell | 9.90e-13 | 177 |
hematopoietic oligopotent progenitor cell | 1.91e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.91e-12 | 161 |
hematopoietic lineage restricted progenitor cell | 4.27e-12 | 120 |
nongranular leukocyte | 2.37e-10 | 115 |
myeloid leukocyte | 4.31e-10 | 72 |
granulocyte monocyte progenitor cell | 1.00e-09 | 67 |
intermediate monocyte | 1.83e-09 | 9 |
CD14-positive, CD16-positive monocyte | 1.83e-09 | 9 |
myeloid cell | 2.53e-08 | 108 |
common myeloid progenitor | 2.53e-08 | 108 |
macrophage dendritic cell progenitor | 4.84e-08 | 61 |
defensive cell | 5.72e-08 | 48 |
phagocyte | 5.72e-08 | 48 |
classical monocyte | 7.19e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.19e-08 | 42 |
myeloid lineage restricted progenitor cell | 3.33e-07 | 66 |
monopoietic cell | 4.65e-07 | 59 |
monocyte | 4.65e-07 | 59 |
monoblast | 4.65e-07 | 59 |
promonocyte | 4.65e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.59e-08 | 76 |
neural tissue | 4.64e-08 | 2 |
bone element | 2.50e-07 | 82 |
immune system | 4.67e-07 | 93 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.