FFCP PHASE1:Hg19::chr6:52285265..52285294,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=114327|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16406|TSSclassifier=S|UniProt=|association_with_transcript=100bp_to_ENST00000433625_5end|coexpression_cluster_id=C22|description=CAGE_peak_3_at_EFHC1_5end|id=chr6:52285265..52285294,+|ontology_enrichment_celltype=CL:0000838!1.50e-07!52;CL:0000542!3.07e-07!53;CL:0000051!3.07e-07!53;CL:0000624!3.15e-07!6|ontology_enrichment_celltype_v019=CL:0000624;7.01e-20;6!CL:0000791;1.52e-13;18!CL:0000789;1.52e-13;18!CL:0002419;1.52e-13;18!CL:0000623;2.36e-11;3!CL:0000084;2.53e-11;25!CL:0000767;1.16e-10;3!CL:0000898;1.53e-10;3!CL:0000094;3.37e-10;8!CL:0000542;1.96e-08;53!CL:0000771;1.44e-07;2!CL:0000081;2.59e-07;11!CL:0000815;2.66e-07;2!CL:0001014;2.66e-07;2!CL:0000792;2.66e-07;2!CL:0002677;2.66e-07;2!CL:0001016;2.66e-07;2|ontology_enrichment_celltype_v019_2=CL:0000624,8.03e-20,6;CL:0000791,1.39e-13,18;CL:0000789,1.39e-13,18;CL:0002420,1.39e-13,18;CL:0002419,1.39e-13,18;CL:0000790,1.39e-13,18;CL:0000838,9.22e-13,52;CL:0000542,1.91e-12,53;CL:0000051,1.91e-12,53;CL:0000623,2.25e-11,3;CL:0000825,2.25e-11,3;CL:0000084,2.69e-11,25;CL:0000827,2.69e-11,25;CL:0000767,1.00e-10,3;CL:0000738,1.03e-10,136;CL:0000898,1.75e-10,3;CL:0000094,2.89e-10,8;CL:0000037,3.14e-08,168;CL:0000771,1.28e-07,2;CL:0000988,1.74e-07,177;CL:0001014,2.03e-07,2;CL:0001016,2.03e-07,2;CL:0000081,2.33e-07,11;CL:0002032,2.75e-07,161;CL:0000837,2.75e-07,161;CL:0000815,2.89e-07,2;CL:0000792,2.89e-07,2;CL:0002677,2.89e-07,2;CL:0002031,6.87e-07,120|ontology_enrichment_development_v019=CL:0000790;1.52e-13;18!CL:0000051;1.96e-08;53|ontology_enrichment_disease=DOID:305!4.10e-07!106|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,4.72037132218685,3.45446458287491,2.94150634300544,0,0,0.369754010166788,0.0774672005803016,0.568676929949686,1.46800219667424,0,0.601633342410425,2.17010870715852,0,0,0,0,0.377875943688809,0.727752183563449,0,0,0.619412741790207,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,1.21079900526674,0,0.632924774881769,0,0.425208599930087,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0.661044872784862,0.954053754535364,7.39976859842283,7.04684627245127,17.2022952656353,3.96513985737078,0.560508562981536,2.10707267820062,5.11445402295966,3.53709686474248,8.8408644569789,0.334372990781356,3.58514493296949,1.4203434172042,1.94826728407911,0.668462741311041,1.17842362989935,0.886135578334485,1.35401931882508,0.25618263945135,0.260118695119756,0,0,0.289803085735052,4.00373720537563,4.0131124213457,5.22677619024884,0.226618685395132,8.04763036564035,13.4014703738226,9.86776798876061,0,0,0,0.903450714466637,0.127986611154418,0,0,0,11.8947978502592,1.60464117470104,6.95157138637435,0,0,0,0,0,0.289693037921647,0,0,0.0945348171640679,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0.367663080345869,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0.926864265692532,0.860509862246441,0,0,0,0,0,0,0,0.151357427644931,0.576175924479999,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,1.07633781413317,0,0,0.600182192168805,0.206105058476878,2.57640540045629,0,2.70042131586026,0.0974370051611986,0.504867548488229,0,0,8.16522062788213,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.231860809950154,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0.414656231081544,0.576479813667846,0.50496973370552,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.428933980974443,0,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0,0,1.42636905040718,0.144781306667579,0,0,0,10.2455995305002,5.60631694634745,8.2139543219039,0,2.60279707715243,0.773288812777695,0.502548796003046,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.356857977594324,0.157702415033935,0,0,0,0,0.664225598535437,0.184369168541703,0,0,0,0.206768026122887,2.15714200818617,0,0,0,0,0,0.460385919864187,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0.256450125116389,0,0,0,0.0915694648183434,0.247528499761764,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,1.40373983744043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430234056612155,0.0982490410131212,0,0,0,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0.490080431962063,0,0,0.213425530045242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83862510964535,0,0,0,0,0,0,0,0,0.36408156524854,0,0.852408440419239,0,0.296964680832639,0,0,0,0,0,0.422250816255987,0,0,0,0.20453736500431,0.123084805461069,0,0.0898683511473268,0.17902117467560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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=114327 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16406 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=100bp_to_ENST00000433625_5end | |||
|coexpression_cluster_id=C22 | |||
|description=CAGE_peak_3_at_EFHC1_5end | |||
|id=chr6:52285265..52285294,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.50e-07!52;CL:0000542!3.07e-07!53;CL:0000051!3.07e-07!53;CL:0000624!3.15e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000624;7.01e-20;6!CL:0000791;1.52e-13;18!CL:0000789;1.52e-13;18!CL:0002419;1.52e-13;18!CL:0000623;2.36e-11;3!CL:0000084;2.53e-11;25!CL:0000767;1.16e-10;3!CL:0000898;1.53e-10;3!CL:0000094;3.37e-10;8!CL:0000542;1.96e-08;53!CL:0000771;1.44e-07;2!CL:0000081;2.59e-07;11!CL:0000815;2.66e-07;2!CL:0001014;2.66e-07;2!CL:0000792;2.66e-07;2!CL:0002677;2.66e-07;2!CL:0001016;2.66e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,8.03e-20,6;CL:0000791,1.39e-13,18;CL:0000789,1.39e-13,18;CL:0002420,1.39e-13,18;CL:0002419,1.39e-13,18;CL:0000790,1.39e-13,18;CL:0000838,9.22e-13,52;CL:0000542,1.91e-12,53;CL:0000051,1.91e-12,53;CL:0000623,2.25e-11,3;CL:0000825,2.25e-11,3;CL:0000084,2.69e-11,25;CL:0000827,2.69e-11,25;CL:0000767,1.00e-10,3;CL:0000738,1.03e-10,136;CL:0000898,1.75e-10,3;CL:0000094,2.89e-10,8;CL:0000037,3.14e-08,168;CL:0000771,1.28e-07,2;CL:0000988,1.74e-07,177;CL:0001014,2.03e-07,2;CL:0001016,2.03e-07,2;CL:0000081,2.33e-07,11;CL:0002032,2.75e-07,161;CL:0000837,2.75e-07,161;CL:0000815,2.89e-07,2;CL:0000792,2.89e-07,2;CL:0002677,2.89e-07,2;CL:0002031,6.87e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;1.52e-13;18!CL:0000051;1.96e-08;53 | |||
|ontology_enrichment_disease=DOID:305!4.10e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p3@EFHC1 | |||
}} |
Revision as of 21:22, 13 September 2013
Short description: | p3@EFHC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_EFHC1_5end |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | 100bp_to_ENST00000433625_5end |
EntrezGene: | EFHC1 |
HGNC: | 16406 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 8.03e-20 | 6 |
mature alpha-beta T cell | 1.39e-13 | 18 |
alpha-beta T cell | 1.39e-13 | 18 |
immature T cell | 1.39e-13 | 18 |
mature T cell | 1.39e-13 | 18 |
immature alpha-beta T cell | 1.39e-13 | 18 |
lymphoid lineage restricted progenitor cell | 9.22e-13 | 52 |
lymphocyte | 1.91e-12 | 53 |
common lymphoid progenitor | 1.91e-12 | 53 |
natural killer cell | 2.25e-11 | 3 |
pro-NK cell | 2.25e-11 | 3 |
T cell | 2.69e-11 | 25 |
pro-T cell | 2.69e-11 | 25 |
basophil | 1.00e-10 | 3 |
leukocyte | 1.03e-10 | 136 |
naive T cell | 1.75e-10 | 3 |
granulocyte | 2.89e-10 | 8 |
hematopoietic stem cell | 3.14e-08 | 168 |
eosinophil | 1.28e-07 | 2 |
hematopoietic cell | 1.74e-07 | 177 |
CD1a-positive Langerhans cell | 2.03e-07 | 2 |
immature CD1a-positive Langerhans cell | 2.03e-07 | 2 |
blood cell | 2.33e-07 | 11 |
hematopoietic oligopotent progenitor cell | 2.75e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.75e-07 | 161 |
regulatory T cell | 2.89e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.89e-07 | 2 |
naive regulatory T cell | 2.89e-07 | 2 |
hematopoietic lineage restricted progenitor cell | 6.87e-07 | 120 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.