FFCP PHASE1:Hg19::chr6:44355478..44355489,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=988|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1743|TSSclassifier=W|UniProt=|association_with_transcript=176bp_to_uc003oxl.2_5end|coexpression_cluster_id=C2|description=CAGE_peak_5_at_CDC5L_5end|id=chr6:44355478..44355489,+|ontology_enrichment_celltype=CL:0000738!1.11e-43!140;CL:0000037!1.77e-43!172;CL:0000566!1.77e-43!172;CL:0002032!5.58e-42!165;CL:0000837!5.58e-42!165;CL:0000988!4.01e-39!182;CL:0002031!8.89e-36!124;CL:0002087!2.12e-35!119;CL:0000766!8.62e-33!76;CL:0000763!1.07e-31!112;CL:0000049!1.07e-31!112;CL:0000557!1.79e-27!71;CL:0002057!9.44e-27!42;CL:0002009!1.00e-26!65;CL:0000839!1.39e-26!70;CL:0000860!2.72e-26!45;CL:0002194!1.59e-25!63;CL:0000576!1.59e-25!63;CL:0000040!1.59e-25!63;CL:0000559!1.59e-25!63;CL:0000134!8.06e-13!358;CL:0002320!4.83e-12!365;CL:0000219!1.24e-10!390;CL:0000791!5.11e-10!18;CL:0000789!5.11e-10!18;CL:0002420!5.11e-10!18;CL:0002419!5.11e-10!18;CL:0000790!5.11e-10!18;CL:0000084!1.30e-09!25;CL:0000827!1.30e-09!25;CL:0000542!2.29e-09!53;CL:0000051!2.29e-09!53;CL:0000838!5.76e-09!52;CL:0000094!3.68e-07!8;CL:0000034!5.05e-07!444|ontology_enrichment_celltype_v019=CL:0000860;2.96e-49;33!CL:0002057;2.96e-49;33!CL:0000576;2.69e-35;48!CL:0000473;1.08e-33;39!CL:0000234;1.08e-33;39!CL:0000766;5.13e-28;69!CL:0000094;3.73e-16;8!CL:0000763;3.66e-13;100!CL:0002087;6.14e-13;104!CL:0000738;7.17e-12;136!CL:0000081;2.22e-11;11!CL:0002393;4.52e-10;6!CL:0002397;4.52e-10;6!CL:0000624;1.32e-09;6!CL:0000775;3.52e-09;3!CL:0000875;1.50e-07;3!CL:0002396;1.50e-07;3!CL:0000988;1.94e-07;177!CL:0000791;4.87e-07;18!CL:0000789;4.87e-07;18!CL:0002419;4.87e-07;18|ontology_enrichment_celltype_v019_2=CL:0000860,2.40e-68,42;CL:0002057,2.40e-68,42;CL:0000766,4.94e-59,72;CL:0000473,2.05e-58,48;CL:0000234,2.05e-58,48;CL:0000738,7.04e-55,136;CL:0000557,9.31e-46,67;CL:0002009,1.18e-45,61;CL:0000037,1.42e-44,168;CL:0002194,1.56e-44,59;CL:0000576,1.56e-44,59;CL:0000040,1.56e-44,59;CL:0000559,1.56e-44,59;CL:0000839,8.96e-44,66;CL:0002032,3.61e-42,161;CL:0000837,3.61e-42,161;CL:0002087,9.50e-42,115;CL:0002031,1.10e-41,120;CL:0000988,1.82e-41,177;CL:0000763,7.25e-41,108;CL:0000049,7.25e-41,108;CL:0000094,2.89e-16,8;CL:0002393,5.85e-16,9;CL:0002397,5.85e-16,9;CL:0000134,2.03e-15,354;CL:0002320,8.50e-15,361;CL:0000219,2.16e-13,386;CL:0000081,1.85e-11,11;CL:0000034,2.65e-10,441;CL:0000048,5.73e-10,427;CL:0000624,8.80e-10,6;CL:0000723,1.32e-09,433;CL:0000775,3.60e-09,3;CL:0000875,2.34e-07,3;CL:0002396,2.34e-07,3;CL:0000791,3.62e-07,18;CL:0000789,3.62e-07,18;CL:0002420,3.62e-07,18;CL:0002419,3.62e-07,18;CL:0000790,3.62e-07,18|ontology_enrichment_development_v019=CL:0002057;1.10e-48;42!CL:0000049;2.13e-12;108!CL:0000790;4.87e-07;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.55e-31!102;UBERON:0003061!1.55e-31!102;UBERON:0002193!5.33e-27!112;UBERON:0002371!9.67e-24!80;UBERON:0001474!1.41e-23!86;UBERON:0004765!1.53e-19!101;UBERON:0001434!1.53e-19!101;UBERON:0002405!2.64e-16!115;UBERON:0002384!4.47e-11!375|ontology_enrichment_uberon_v019=UBERON:0000178;6.43e-15;15!UBERON:0000179;6.43e-15;15!UBERON:0000463;6.43e-15;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.69e-52,98;UBERON:0003061,1.69e-52,98;UBERON:0002193,2.40e-46,108;UBERON:0001474,1.78e-41,82;UBERON:0002371,3.59e-41,76;UBERON:0004765,9.49e-37,90;UBERON:0002405,2.38e-33,93;UBERON:0001434,6.65e-32,100;UBERON:0003081,3.73e-19,203;UBERON:0000178,7.75e-15,15;UBERON:0000179,7.75e-15,15;UBERON:0000463,7.75e-15,15;UBERON:0002384,1.20e-14,371;UBERON:0002204,1.54e-14,167;UBERON:0000926,2.03e-09,315;UBERON:0004120,2.03e-09,315;UBERON:0006603,2.03e-09,315|phase1_expression=0.363356758541113,0.214100523890983,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0.286235987131057,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,2.75354993794233,3.0706351847777,0.619264493264304,0,0,0,1.00707360754392,0.426507697462265,0.587200878669695,4.43196326825502,2.80762226458198,2.38711957787437,0.447830948479849,0,0.77272670290256,1.45398238779565,2.26725566213286,1.4555043671269,2.78914844286822,2.46700732813095,2.47765096716083,2.58923153089935,1.0246428261164,2.36482229888585,2.41321976515633,1.93645405075148,5.41705946377367,2.25890807451126,2.18324920046277,2.24723484445085,2.14258724659632,1.60464513538047,2.55734850319616,2.30895910130701,2.19410023383795,1.27867425159808,0.870627715885752,1.13477044938228,1.24564449799115,1.00499466102697,1.5644487552606,1.73751075764093,0.605399502633369,2.20966581592539,0.949387162322653,1.26753171787165,1.91343869968539,0.209658645508376,1.34794357375794,0.750884464207532,1.6072558669708,1.42506371870624,2.18808344918999,1.0959849225878,0,0,0,0.853460445133014,0.400395987036012,0.574752439954483,0.661044872784862,0,0,1.17447437874188,0,1.32171328579026,1.68152568894461,0.526768169550154,1.57367816091066,2.75107533924415,2.46721798799411,0.1671864953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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=988 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1743 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=176bp_to_uc003oxl.2_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_5_at_CDC5L_5end | |||
|id=chr6:44355478..44355489,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.11e-43!140;CL:0000037!1.77e-43!172;CL:0000566!1.77e-43!172;CL:0002032!5.58e-42!165;CL:0000837!5.58e-42!165;CL:0000988!4.01e-39!182;CL:0002031!8.89e-36!124;CL:0002087!2.12e-35!119;CL:0000766!8.62e-33!76;CL:0000763!1.07e-31!112;CL:0000049!1.07e-31!112;CL:0000557!1.79e-27!71;CL:0002057!9.44e-27!42;CL:0002009!1.00e-26!65;CL:0000839!1.39e-26!70;CL:0000860!2.72e-26!45;CL:0002194!1.59e-25!63;CL:0000576!1.59e-25!63;CL:0000040!1.59e-25!63;CL:0000559!1.59e-25!63;CL:0000134!8.06e-13!358;CL:0002320!4.83e-12!365;CL:0000219!1.24e-10!390;CL:0000791!5.11e-10!18;CL:0000789!5.11e-10!18;CL:0002420!5.11e-10!18;CL:0002419!5.11e-10!18;CL:0000790!5.11e-10!18;CL:0000084!1.30e-09!25;CL:0000827!1.30e-09!25;CL:0000542!2.29e-09!53;CL:0000051!2.29e-09!53;CL:0000838!5.76e-09!52;CL:0000094!3.68e-07!8;CL:0000034!5.05e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.96e-49;33!CL:0002057;2.96e-49;33!CL:0000576;2.69e-35;48!CL:0000473;1.08e-33;39!CL:0000234;1.08e-33;39!CL:0000766;5.13e-28;69!CL:0000094;3.73e-16;8!CL:0000763;3.66e-13;100!CL:0002087;6.14e-13;104!CL:0000738;7.17e-12;136!CL:0000081;2.22e-11;11!CL:0002393;4.52e-10;6!CL:0002397;4.52e-10;6!CL:0000624;1.32e-09;6!CL:0000775;3.52e-09;3!CL:0000875;1.50e-07;3!CL:0002396;1.50e-07;3!CL:0000988;1.94e-07;177!CL:0000791;4.87e-07;18!CL:0000789;4.87e-07;18!CL:0002419;4.87e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.40e-68,42;CL:0002057,2.40e-68,42;CL:0000766,4.94e-59,72;CL:0000473,2.05e-58,48;CL:0000234,2.05e-58,48;CL:0000738,7.04e-55,136;CL:0000557,9.31e-46,67;CL:0002009,1.18e-45,61;CL:0000037,1.42e-44,168;CL:0002194,1.56e-44,59;CL:0000576,1.56e-44,59;CL:0000040,1.56e-44,59;CL:0000559,1.56e-44,59;CL:0000839,8.96e-44,66;CL:0002032,3.61e-42,161;CL:0000837,3.61e-42,161;CL:0002087,9.50e-42,115;CL:0002031,1.10e-41,120;CL:0000988,1.82e-41,177;CL:0000763,7.25e-41,108;CL:0000049,7.25e-41,108;CL:0000094,2.89e-16,8;CL:0002393,5.85e-16,9;CL:0002397,5.85e-16,9;CL:0000134,2.03e-15,354;CL:0002320,8.50e-15,361;CL:0000219,2.16e-13,386;CL:0000081,1.85e-11,11;CL:0000034,2.65e-10,441;CL:0000048,5.73e-10,427;CL:0000624,8.80e-10,6;CL:0000723,1.32e-09,433;CL:0000775,3.60e-09,3;CL:0000875,2.34e-07,3;CL:0002396,2.34e-07,3;CL:0000791,3.62e-07,18;CL:0000789,3.62e-07,18;CL:0002420,3.62e-07,18;CL:0002419,3.62e-07,18;CL:0000790,3.62e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;1.10e-48;42!CL:0000049;2.13e-12;108!CL:0000790;4.87e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.55e-31!102;UBERON:0003061!1.55e-31!102;UBERON:0002193!5.33e-27!112;UBERON:0002371!9.67e-24!80;UBERON:0001474!1.41e-23!86;UBERON:0004765!1.53e-19!101;UBERON:0001434!1.53e-19!101;UBERON:0002405!2.64e-16!115;UBERON:0002384!4.47e-11!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.43e-15;15!UBERON:0000179;6.43e-15;15!UBERON:0000463;6.43e-15;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.69e-52,98;UBERON:0003061,1.69e-52,98;UBERON:0002193,2.40e-46,108;UBERON:0001474,1.78e-41,82;UBERON:0002371,3.59e-41,76;UBERON:0004765,9.49e-37,90;UBERON:0002405,2.38e-33,93;UBERON:0001434,6.65e-32,100;UBERON:0003081,3.73e-19,203;UBERON:0000178,7.75e-15,15;UBERON:0000179,7.75e-15,15;UBERON:0000463,7.75e-15,15;UBERON:0002384,1.20e-14,371;UBERON:0002204,1.54e-14,167;UBERON:0000926,2.03e-09,315;UBERON:0004120,2.03e-09,315;UBERON:0006603,2.03e-09,315 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0.286235987131057,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,2.75354993794233,3.0706351847777,0.619264493264304,0,0,0,1.00707360754392,0.426507697462265,0.587200878669695,4.43196326825502,2.80762226458198,2.38711957787437,0.447830948479849,0,0.77272670290256,1.45398238779565,2.26725566213286,1.4555043671269,2.78914844286822,2.46700732813095,2.47765096716083,2.58923153089935,1.0246428261164,2.36482229888585,2.41321976515633,1.93645405075148,5.41705946377367,2.25890807451126,2.18324920046277,2.24723484445085,2.14258724659632,1.60464513538047,2.55734850319616,2.30895910130701,2.19410023383795,1.27867425159808,0.870627715885752,1.13477044938228,1.24564449799115,1.00499466102697,1.5644487552606,1.73751075764093,0.605399502633369,2.20966581592539,0.949387162322653,1.26753171787165,1.91343869968539,0.209658645508376,1.34794357375794,0.750884464207532,1.6072558669708,1.42506371870624,2.18808344918999,1.0959849225878,0,0,0,0.853460445133014,0.400395987036012,0.574752439954483,0.661044872784862,0,0,1.17447437874188,0,1.32171328579026,1.68152568894461,0.526768169550154,1.57367816091066,2.75107533924415,2.46721798799411,0.167186495390678,0.651844533267181,0.473447805734733,1.94826728407911,0.445641827540694,1.47302953737419,0.664601683750863,0.541607727530031,0.128091319725675,0.130059347559878,0,0,0,0.593146252648242,0,0,0.339928028092699,1.14966148080576,1.71813722741315,0.759059076058509,0.318565414324097,0.651083453856419,0.950452044448374,0.602300476311091,0.383959833463255,1.24930726552346,0.947109008176067,0.821127996921047,3.02410114837099,1.87208137048455,0.868946423296794,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0.196468613246569,0,0,0.649094787309367,0.870648686496336,0.797747763113191,0.715471872916026,1.14398982156026,0,0.198762407366705,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0.33472061276467,0,0,0.24406205754817,1.10298924103761,0,0.267899184852239,0,0.225222960966644,0,0,0.183201743930407,17.1314542666882,3.87780264148325,0,0,0.25326102332916,0.264818361626438,0,0.354668382198357,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0.149448680551801,0.117434498643765,0,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0,0,0,0.113432183160021,0,0,0.211931901159562,0,0.515262646192195,0,0,0.506328996723799,0.0974370051611986,0.252433774244115,0.0920498986422993,0.323292113637624,0,0,0,0.193260853163297,0,0,0.243947412259191,0,0,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0,0.110293972732394,0.217879444092406,0.237270619111097,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0,0,1.26755034821831,0,0,0,0.122988438543114,0.343135620597051,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0,0,0.858486162094873,0.246217006087397,0.936017060556951,0.445893486866185,0.93733833986777,0.503946384596579,0.425325291727159,0.179117045405697,0,0,6.40462209264727,0.264145302039678,1.24396869324463,0.144119953416961,0.6312121671319,0.063497894292169,0,0,0,0,0.300343057843917,0,0.112131084345361,0,0.22001485746285,0.387815147273333,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0.358121926479791,0.336255431980582,2.36436912242313,0.862510299438069,1.79680250791648,0.254094624222463,0,0,0.502548796003046,0,8.23907726341901,11.966458368161,13.2612964299531,0.12269149171914,0.500170521059677,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0,0,2.06768026122887,0.862856803274467,1.06727557803444,0,0,0,0.248107807818777,0.306923946576125,0,0.256278298511402,1.02341449813341,0,0,0.308419387605311,0,0.0821271560138091,0,0.464841513839837,0,0.40101294060657,0.0920809889358963,0.114814448164607,0,0.262248829918848,0,0,0,0,0.211103257785751,0,0.170093705276516,0,0,0,0,0,0,0,0.438519753291869,0,0,0,0,0.206082023295445,1.37354197227515,1.07262349896764,0,0,0,0,0,0.15350367472613,0,0,0,0.170453254832202,0.0890320356467374,0,0.192190067365106,0.510450849978337,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0.286249773483982,0,0,0.38126038784765,0,0,0,0.78494864019923,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0.0982490410131212,0,0,0,0,0,0.349934720244983,0.192444225451024,0,0,0.564862804660675,0,0,0,0,2.02979043692868,3.0585488285695,2.84823593587081,2.38231775457789,1.64544909234478,6.48473311192717,3.24018862342869,0,0.213648142254946,0,0.490080431962063,0.929015875628594,0.144269212976445,0.569134746787313,0.797131363644112,0.399158742865633,0.766021480529467,0.211673582723883,0.649243880549111,0.842391534340376,0.228234679033192,0.47003968731907,0,0.169291777801603,0.481764225311099,0,0,0,0.921722292925374,0.894704431569664,0.667396566847634,1.17232857241224,0.556812347790485,0,0.27045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| |||
|short_description=p5@CDC5L | |||
}} |
Revision as of 21:11, 13 September 2013
Short description: | p5@CDC5L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_CDC5L_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 176bp_to_uc003oxl.2_5end |
EntrezGene: | CDC5L |
HGNC: | 1743 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.69e-52 | 98 |
blood island | 1.69e-52 | 98 |
hemolymphoid system | 2.40e-46 | 108 |
bone element | 1.78e-41 | 82 |
bone marrow | 3.59e-41 | 76 |
skeletal element | 9.49e-37 | 90 |
immune system | 2.38e-33 | 93 |
skeletal system | 6.65e-32 | 100 |
lateral plate mesoderm | 3.73e-19 | 203 |
blood | 7.75e-15 | 15 |
haemolymphatic fluid | 7.75e-15 | 15 |
organism substance | 7.75e-15 | 15 |
connective tissue | 1.20e-14 | 371 |
musculoskeletal system | 1.54e-14 | 167 |
mesoderm | 2.03e-09 | 315 |
mesoderm-derived structure | 2.03e-09 | 315 |
presumptive mesoderm | 2.03e-09 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.