FFCP PHASE1:Hg19::chr6:41606180..41606244,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4188|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6967|TSSclassifier=S|UniProt=Q99750,B1AKB6,B1AKC0|association_with_transcript=0bp_to_ENST00000230321,ENST00000373050,ENST00000446650,ENST00000543326,NM_005586,uc003oqq.3,uc010jxn.2_5end|description=CAGE_peak_3_at_MDFI_5end|id=chr6:41606180..41606244,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:3095!5.23e-07!22;DOID:2994!5.23e-07!22|ontology_enrichment_disease_v019=DOID:3095;7.51e-08;22!DOID:2994;7.51e-08;22|ontology_enrichment_disease_v019_2=DOID:3095,7.62e-08,22;DOID:2994,7.62e-08,22|ontology_enrichment_uberon=UBERON:0000924!5.81e-13!173;UBERON:0006601!5.81e-13!173;UBERON:0004121!2.46e-11!169;UBERON:0000119!2.98e-11!312;UBERON:0002346!1.00e-10!90;UBERON:0000073!1.72e-10!94;UBERON:0001016!1.72e-10!94;UBERON:0000483!3.01e-10!309;UBERON:0005743!3.30e-10!86;UBERON:0003075!6.25e-09!86;UBERON:0007284!6.25e-09!86;UBERON:0001017!8.21e-09!82;UBERON:0000922!4.59e-08!612;UBERON:0002200!6.41e-08!11;UBERON:0006876!6.41e-08!11;UBERON:0000153!8.03e-08!129;UBERON:0007811!8.03e-08!129;UBERON:0000033!1.00e-07!123;UBERON:0000064!3.16e-07!219;UBERON:0003056!6.68e-07!61;UBERON:0000025!7.03e-07!194|ontology_enrichment_uberon_v019=UBERON:0000922;8.18e-10;49!UBERON:0006876;1.83e-09;11!UBERON:0007625;3.18e-07;11!UBERON:0001032;6.73e-07;24!UBERON:0004456;6.73e-07;24!UBERON:0002104;8.96e-07;21|ontology_enrichment_uberon_v019_2=UBERON:0006876,1.89e-09,11;UBERON:0004121,2.06e-07,171;UBERON:0000924,2.06e-07,171;UBERON:0006601,2.06e-07,171;UBERON:0007625,3.43e-07,11;UBERON:0001048,7.86e-07,160;UBERON:0000020,9.93e-07,24;UBERON:0001032,9.93e-07,24;UBERON:0004456,9.93e-07,24|phase1_expression=1.45342703416445,0,1.9733616573436,4.00293193412522,3.12872766099101,0.872338524100369,0,0.631719873426831,0.261185628199839,3.44027511102112,6.97801167972428,6.55324116390517,5.27533956456907,0.990130823680373,0.994192127183747,0,0,0,0.487932798790507,64.6385554903136,46.3081569124454,126.322252755669,15.4567433050771,8.07559107930017,10.0434111675842,0,0,0,0,0,0.464448369948228,2.75826367343678,1.8072355126695,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6284119788377,10.7312137552582,13.1698438698836,0,0.50133791063589,0.579386075843295,15.905718941022,22.8718389042239,9.92615580222713,7.9822583086523,14.9319135678314,1.30979075497713,0.728590576585084,1.11235332835329,0,0,0,0,0,0,1.19257444420023,0.860234595106124,4.51282652089873,0.56530794192401,2.51699661725944,4.67700671298115,2.29894463190492,0,0,0.33472061276467,0.805658634218294,2.28081631715554,2.92874469057803,0.735326160691737,4.86085168729056,3.66128885964727,2.46982309888787,1.68917220724983,0,4.74632829784064,3.84723662253855,0,0,4.79703457356788,0,0,0,0,0.354668382198357,1.68203280042692,10.6748995729705,1.97334038733728,3.42332138939743,2.15537075311501,3.75962377160955,52.975099675726,88.1549164454398,0.937285727335186,0,0,0,0.469737994575059,0.161872944368132,0,0,0.245668634623536,0,0,0,0,0,0,0.250237039743928,0,0,0,0,4.76415169272088,0,0.640672166455702,0,0,0,0.257640540045629,0,0,0.0974370051611986,0,0,0,0,0.201504196455281,0.169560592310488,3.47869535693934,2.72746120590835,1.72082757233402,9.02605425359006,9.14455401418248,15.2214065159069,14.823530867198,20.1856680700503,8.75945661781992,0,0.643240938192885,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,2.21446636387394,9.81692416624121,12.7587943512734,47.0427876433734,0,0,1.18157981336281,0,0,7.20584803253807,1.09750285408626,0,0,3.61094936118265,0.651616610620649,0,4.3299402607582,5.21686822387846,12.9149563659404,1.29929802984966,0.462985512576611,0.380508304469197,0,0,0,0,0,0.93733833986777,1.51183915378974,2.83550194484773,0.179117045405697,0.581267877027924,2.68367875415648,0,0,0,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,23.323265543835,39.6723662638285,21.7081326030012,0.258543431515556,0,0,0,0,1.80045161983499,0,1.3321108950805,3.14551586047925,7.05408087008876,3.29296134712308,0,4.6200953336531,1.58390374586686,0.602878754119172,0.871533458600294,0.699810938274399,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77866236955724,2.60279707715243,3.09315525111078,4.52293916402742,4.46557126157214,0,0,0,2.33113834266366,4.50153468953709,2.17012018959788,0.415941723061614,0,0,0,0.902838299183157,45.481500811197,4.1389228517002,1.99267679560631,1.29058417979192,0,68.5304051119592,84.4132822574705,0,0,0,4.24378600024763,6.65741758041988,15.7242952531434,0,0.61384789315225,0,0,0.511707249066704,1.44768529029247,1.48418066444991,0,0,0,0,0,0,2.80709058424599,0.184161977871793,0,0,0.262248829918848,0.451199612907412,0.308061348417659,5.49044838423799,4.38417673959782,0.633309773357254,0,1.02056223165909,2.59099099322567,3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061663132462,11.3104521225645,0.651226148887796,0,0,0,2.34640942403454,0.733448665097199,12.6137815277879,0.665756774185513,5.43439242695771,0|short_description=p3@MDFI}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4188 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6967 | |||
|TSSclassifier=S | |||
|UniProt=Q99750,B1AKB6,B1AKC0 | |||
|association_with_transcript=0bp_to_ENST00000230321,ENST00000373050,ENST00000446650,ENST00000543326,NM_005586,uc003oqq.3,uc010jxn.2_5end | |||
|description=CAGE_peak_3_at_MDFI_5end | |||
|id=chr6:41606180..41606244,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!5.23e-07!22;DOID:2994!5.23e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;7.51e-08;22!DOID:2994;7.51e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,7.62e-08,22;DOID:2994,7.62e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000924!5.81e-13!173;UBERON:0006601!5.81e-13!173;UBERON:0004121!2.46e-11!169;UBERON:0000119!2.98e-11!312;UBERON:0002346!1.00e-10!90;UBERON:0000073!1.72e-10!94;UBERON:0001016!1.72e-10!94;UBERON:0000483!3.01e-10!309;UBERON:0005743!3.30e-10!86;UBERON:0003075!6.25e-09!86;UBERON:0007284!6.25e-09!86;UBERON:0001017!8.21e-09!82;UBERON:0000922!4.59e-08!612;UBERON:0002200!6.41e-08!11;UBERON:0006876!6.41e-08!11;UBERON:0000153!8.03e-08!129;UBERON:0007811!8.03e-08!129;UBERON:0000033!1.00e-07!123;UBERON:0000064!3.16e-07!219;UBERON:0003056!6.68e-07!61;UBERON:0000025!7.03e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;8.18e-10;49!UBERON:0006876;1.83e-09;11!UBERON:0007625;3.18e-07;11!UBERON:0001032;6.73e-07;24!UBERON:0004456;6.73e-07;24!UBERON:0002104;8.96e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006876,1.89e-09,11;UBERON:0004121,2.06e-07,171;UBERON:0000924,2.06e-07,171;UBERON:0006601,2.06e-07,171;UBERON:0007625,3.43e-07,11;UBERON:0001048,7.86e-07,160;UBERON:0000020,9.93e-07,24;UBERON:0001032,9.93e-07,24;UBERON:0004456,9.93e-07,24 | |||
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| |||
|short_description=p3@MDFI | |||
}} |
Revision as of 20:59, 13 September 2013
Short description: | p3@MDFI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_MDFI_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000230321, ENST00000373050, ENST00000446650, ENST00000543326, NM_005586, uc003oqq.3, uc010jxn.2_5end |
EntrezGene: | MDFI |
HGNC: | 6967 |
UniProt: | Q99750B1AKB6B1AKC0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vasculature of organ | 1.89e-09 | 11 |
ectoderm-derived structure | 2.06e-07 | 171 |
ectoderm | 2.06e-07 | 171 |
presumptive ectoderm | 2.06e-07 | 171 |
pigment epithelium of eye | 3.43e-07 | 11 |
primordium | 7.86e-07 | 160 |
sense organ | 9.93e-07 | 24 |
sensory system | 9.93e-07 | 24 |
entire sense organ system | 9.93e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 7.62e-08 | 22 |
germ cell cancer | 7.62e-08 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.