FFCP PHASE1:Hg19::chr6:31324208..31324229,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3106|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=4932|TSSclassifier=S|UniProt=|association_with_transcript=-63bp_to_uc010jsn.1_5end|description=CAGE_peak_8_at_HLA-B_5end|id=chr6:31324208..31324229,-|ontology_enrichment_celltype=CL:0000738!7.25e-40!140;CL:0002087!1.69e-38!119;CL:0002031!4.41e-35!124;CL:0000037!5.49e-27!172;CL:0000566!5.49e-27!172;CL:0002032!2.03e-26!165;CL:0000837!2.03e-26!165;CL:0000766!3.61e-26!76;CL:0000988!1.10e-25!182;CL:0002194!1.26e-24!63;CL:0000576!1.26e-24!63;CL:0000040!1.26e-24!63;CL:0000559!1.26e-24!63;CL:0002057!5.43e-24!42;CL:0002009!5.58e-23!65;CL:0000839!1.10e-22!70;CL:0000860!3.59e-22!45;CL:0000557!5.98e-22!71;CL:0000763!9.35e-14!112;CL:0000049!9.35e-14!112;CL:0000838!2.24e-13!52;CL:0000542!9.12e-13!53;CL:0000051!9.12e-13!53;CL:0000791!1.05e-09!18;CL:0000789!1.05e-09!18;CL:0002420!1.05e-09!18;CL:0002419!1.05e-09!18;CL:0000790!1.05e-09!18;CL:0000625!1.36e-07!11;CL:0000084!1.38e-07!25;CL:0000827!1.38e-07!25;CL:0002393!9.42e-07!9;CL:0002397!9.42e-07!9|ontology_enrichment_celltype_v019=CL:0000473;2.69e-20;39!CL:0000234;2.69e-20;39!CL:0000860;6.69e-19;33!CL:0002057;6.69e-19;33!CL:0000576;1.25e-18;48!CL:0000766;4.92e-16;69!CL:0002087;3.46e-14;104!CL:0000791;1.97e-13;18!CL:0000789;1.97e-13;18!CL:0002419;1.97e-13;18!CL:0000738;2.70e-11;136!CL:0000625;5.42e-11;11!CL:0000542;2.04e-09;53!CL:0000084;2.90e-09;25!CL:0002393;4.07e-07;6!CL:0002397;4.07e-07;6!CL:0000219;4.22e-07;193!CL:0000763;8.30e-07;100|ontology_enrichment_celltype_v019_2=CL:0000738,2.93e-51,136;CL:0002087,1.11e-49,115;CL:0002031,1.02e-44,120;CL:0002032,5.36e-38,161;CL:0000837,5.36e-38,161;CL:0000037,2.01e-37,168;CL:0000988,9.83e-36,177;CL:0002194,1.65e-34,59;CL:0000576,1.65e-34,59;CL:0000040,1.65e-34,59;CL:0000559,1.65e-34,59;CL:0000766,2.43e-34,72;CL:0000473,2.46e-34,48;CL:0000234,2.46e-34,48;CL:0002009,8.46e-33,61;CL:0000860,2.57e-29,42;CL:0002057,2.57e-29,42;CL:0000839,5.44e-29,66;CL:0000557,2.67e-28,67;CL:0000763,3.41e-21,108;CL:0000049,3.41e-21,108;CL:0000838,3.21e-16,52;CL:0000542,1.07e-15,53;CL:0000051,1.07e-15,53;CL:0000791,1.29e-13,18;CL:0000789,1.29e-13,18;CL:0002420,1.29e-13,18;CL:0002419,1.29e-13,18;CL:0000790,1.29e-13,18;CL:0000625,3.44e-11,11;CL:0000134,3.81e-11,354;CL:0002320,2.31e-10,361;CL:0002393,7.42e-10,9;CL:0002397,7.42e-10,9;CL:0000084,2.54e-09,25;CL:0000827,2.54e-09,25;CL:0000219,5.15e-08,386;CL:0000048,3.00e-07,427;CL:0000236,6.58e-07,14;CL:0000034,8.95e-07,441;CL:0000723,9.07e-07,433|ontology_enrichment_development_v019=CL:0002057;4.06e-22;42!CL:0000790;1.97e-13;18!CL:0000051;2.04e-09;53!CL:0000049;4.23e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!5.58e-28!112;UBERON:0002390!2.66e-26!102;UBERON:0003061!2.66e-26!102;UBERON:0002371!3.50e-18!80;UBERON:0001474!1.24e-16!86;UBERON:0002405!1.44e-14!115;UBERON:0004765!1.04e-11!101;UBERON:0001434!1.04e-11!101;UBERON:0003081!6.79e-10!216;UBERON:0000178!1.60e-08!15;UBERON:0000179!1.60e-08!15;UBERON:0000463!1.60e-08!15;UBERON:0002204!3.75e-07!167|ontology_enrichment_uberon_v019=UBERON:0000178;7.80e-09;15!UBERON:0000179;7.80e-09;15!UBERON:0000463;7.80e-09;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.19e-31,98;UBERON:0003061,2.19e-31,98;UBERON:0002193,1.75e-30,108;UBERON:0002371,6.18e-23,76;UBERON:0002405,6.35e-23,93;UBERON:0001474,6.52e-21,82;UBERON:0004765,1.34e-17,90;UBERON:0001434,4.37e-15,100;UBERON:0003081,1.15e-12,203;UBERON:0002384,4.15e-10,371;UBERON:0000178,5.94e-09,15;UBERON:0000179,5.94e-09,15;UBERON:0000463,5.94e-09,15;UBERON:0002204,3.05e-07,167|phase1_expression=0,0,0,2.00146596706261,0,0,0,0.631719873426831,0,0,0,0,0,0,0,1.34465029290355,1.80808358407193,2.92124036154949,0.975865597581014,0,0,0,0.286235987131057,0.273748850145768,0,2.44522898393444,3.28402357799783,2.51874500203774,7.47392126012918,3.45446458287491,4.02521920621798,0,0,0,0,0.426507697462265,0.293600439334847,3.87796785972314,7.82123345133553,2.82114131930607,2.01523926815932,3.2389366601898,3.09090681161024,8.57849608799432,4.1566353805769,0.485168122375632,9.99444858694444,9.45686142450199,3.40677007984614,14.3846196161075,8.19714260893122,0.945928919554341,9.3081333798887,4.51839278508678,4.06279459783025,9.60035931667284,6.5497476013883,0.674170453335254,15.3041946185451,3.53021929783703,1.27867425159808,13.5239033076554,4.9865914405408,0.852449501065388,19.4440189881151,9.64554881974938,0.622822248995575,13.3161792586074,4.17186334736161,0.868755378820466,13.3187890579341,7.36555271975129,2.21523671208619,5.49263744411049,13.6066751977628,5.45112478321777,4.6054738770063,9.16079046333189,2.57160938715328,2.56511469367124,10.5425838915518,4.38393969035121,1.75996244461323,4.91524750135918,4.44754626931777,5.12076267079809,3.60356388332411,3.4485146397269,9.25462821898807,3.81621501814146,1.70763890732835,0.587237189370939,1.52909291250092,0,4.48406850385229,1.05353633910031,0.983548850569165,18.4715058492107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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3106 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4932 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-63bp_to_uc010jsn.1_5end | |||
|description=CAGE_peak_8_at_HLA-B_5end | |||
|id=chr6:31324208..31324229,- | |||
|ontology_enrichment_celltype=CL:0000738!7.25e-40!140;CL:0002087!1.69e-38!119;CL:0002031!4.41e-35!124;CL:0000037!5.49e-27!172;CL:0000566!5.49e-27!172;CL:0002032!2.03e-26!165;CL:0000837!2.03e-26!165;CL:0000766!3.61e-26!76;CL:0000988!1.10e-25!182;CL:0002194!1.26e-24!63;CL:0000576!1.26e-24!63;CL:0000040!1.26e-24!63;CL:0000559!1.26e-24!63;CL:0002057!5.43e-24!42;CL:0002009!5.58e-23!65;CL:0000839!1.10e-22!70;CL:0000860!3.59e-22!45;CL:0000557!5.98e-22!71;CL:0000763!9.35e-14!112;CL:0000049!9.35e-14!112;CL:0000838!2.24e-13!52;CL:0000542!9.12e-13!53;CL:0000051!9.12e-13!53;CL:0000791!1.05e-09!18;CL:0000789!1.05e-09!18;CL:0002420!1.05e-09!18;CL:0002419!1.05e-09!18;CL:0000790!1.05e-09!18;CL:0000625!1.36e-07!11;CL:0000084!1.38e-07!25;CL:0000827!1.38e-07!25;CL:0002393!9.42e-07!9;CL:0002397!9.42e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.69e-20;39!CL:0000234;2.69e-20;39!CL:0000860;6.69e-19;33!CL:0002057;6.69e-19;33!CL:0000576;1.25e-18;48!CL:0000766;4.92e-16;69!CL:0002087;3.46e-14;104!CL:0000791;1.97e-13;18!CL:0000789;1.97e-13;18!CL:0002419;1.97e-13;18!CL:0000738;2.70e-11;136!CL:0000625;5.42e-11;11!CL:0000542;2.04e-09;53!CL:0000084;2.90e-09;25!CL:0002393;4.07e-07;6!CL:0002397;4.07e-07;6!CL:0000219;4.22e-07;193!CL:0000763;8.30e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.93e-51,136;CL:0002087,1.11e-49,115;CL:0002031,1.02e-44,120;CL:0002032,5.36e-38,161;CL:0000837,5.36e-38,161;CL:0000037,2.01e-37,168;CL:0000988,9.83e-36,177;CL:0002194,1.65e-34,59;CL:0000576,1.65e-34,59;CL:0000040,1.65e-34,59;CL:0000559,1.65e-34,59;CL:0000766,2.43e-34,72;CL:0000473,2.46e-34,48;CL:0000234,2.46e-34,48;CL:0002009,8.46e-33,61;CL:0000860,2.57e-29,42;CL:0002057,2.57e-29,42;CL:0000839,5.44e-29,66;CL:0000557,2.67e-28,67;CL:0000763,3.41e-21,108;CL:0000049,3.41e-21,108;CL:0000838,3.21e-16,52;CL:0000542,1.07e-15,53;CL:0000051,1.07e-15,53;CL:0000791,1.29e-13,18;CL:0000789,1.29e-13,18;CL:0002420,1.29e-13,18;CL:0002419,1.29e-13,18;CL:0000790,1.29e-13,18;CL:0000625,3.44e-11,11;CL:0000134,3.81e-11,354;CL:0002320,2.31e-10,361;CL:0002393,7.42e-10,9;CL:0002397,7.42e-10,9;CL:0000084,2.54e-09,25;CL:0000827,2.54e-09,25;CL:0000219,5.15e-08,386;CL:0000048,3.00e-07,427;CL:0000236,6.58e-07,14;CL:0000034,8.95e-07,441;CL:0000723,9.07e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;4.06e-22;42!CL:0000790;1.97e-13;18!CL:0000051;2.04e-09;53!CL:0000049;4.23e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.58e-28!112;UBERON:0002390!2.66e-26!102;UBERON:0003061!2.66e-26!102;UBERON:0002371!3.50e-18!80;UBERON:0001474!1.24e-16!86;UBERON:0002405!1.44e-14!115;UBERON:0004765!1.04e-11!101;UBERON:0001434!1.04e-11!101;UBERON:0003081!6.79e-10!216;UBERON:0000178!1.60e-08!15;UBERON:0000179!1.60e-08!15;UBERON:0000463!1.60e-08!15;UBERON:0002204!3.75e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.80e-09;15!UBERON:0000179;7.80e-09;15!UBERON:0000463;7.80e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.19e-31,98;UBERON:0003061,2.19e-31,98;UBERON:0002193,1.75e-30,108;UBERON:0002371,6.18e-23,76;UBERON:0002405,6.35e-23,93;UBERON:0001474,6.52e-21,82;UBERON:0004765,1.34e-17,90;UBERON:0001434,4.37e-15,100;UBERON:0003081,1.15e-12,203;UBERON:0002384,4.15e-10,371;UBERON:0000178,5.94e-09,15;UBERON:0000179,5.94e-09,15;UBERON:0000463,5.94e-09,15;UBERON:0002204,3.05e-07,167 | |||
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| |||
|short_description=p8@HLA-B | |||
}} |
Revision as of 20:09, 13 September 2013
Short description: | p8@HLA-B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_HLA-B_5end |
Coexpression cluster: | NA |
Association with transcript: | -63bp_to_uc010jsn.1_5end |
EntrezGene: | HLA-B |
HGNC: | 4932 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.19e-31 | 98 |
blood island | 2.19e-31 | 98 |
hemolymphoid system | 1.75e-30 | 108 |
bone marrow | 6.18e-23 | 76 |
immune system | 6.35e-23 | 93 |
bone element | 6.52e-21 | 82 |
skeletal element | 1.34e-17 | 90 |
skeletal system | 4.37e-15 | 100 |
lateral plate mesoderm | 1.15e-12 | 203 |
connective tissue | 4.15e-10 | 371 |
blood | 5.94e-09 | 15 |
haemolymphatic fluid | 5.94e-09 | 15 |
organism substance | 5.94e-09 | 15 |
musculoskeletal system | 3.05e-07 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.